EMLSAT00000005416, EMLSAT00000005416-701263 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005416
Unique NameEMLSAT00000005416-701263
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2918supercontigLSalAtl2s2918:1117..2218 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005416 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005416EMLSAG00000005416-688182Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000023636EMLSAE00000023636-732564Lepeophtheirus salmonisexon
EMLSAE00000023637EMLSAE00000023637-732565Lepeophtheirus salmonisexon
EMLSAE00000023638EMLSAE00000023638-732566Lepeophtheirus salmonisexon
EMLSAE00000023639EMLSAE00000023639-732567Lepeophtheirus salmonisexon
EMLSAE00000023640EMLSAE00000023640-732568Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768089auto768089Lepeophtheirus salmonispolypeptide
polypeptide-auto768090auto768090Lepeophtheirus salmonispolypeptide
EMLSAP00000005416EMLSAP00000005416Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005416

>EMLSAP00000005416 ID=EMLSAP00000005416|Name=EMLSAP00000005416|organism=Lepeophtheirus salmonis|type=polypeptide|length=231bp
MNKVISALFFLVATALAKPNDGIAKRIMDMRLIFLYEQVVYFHIISVKTA
ITAAHCCRNLPKNAKVVAGDHSQLSLEGFEQRIRVKSYVIHPDFGTSGVN
NDICILHLEKPLKFNELQCLTKIXXFEGDAVISGWGTTYSGAPPSFVXRW
AKVNIVSKAECQNAYGSLLDDSMICAAAPGKDSCQGDSGGPMVCDGVQCG
VVSWGYGCAAPKYPGVYTKLSKFMDWVKENV
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mRNA from alignment at LSalAtl2s2918:1117..2218+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005416-701263 ID=EMLSAT00000005416-701263|Name=EMLSAT00000005416|organism=Lepeophtheirus salmonis|type=mRNA|length=1102bp|location=Sequence derived from alignment at LSalAtl2s2918:1117..2218+ (Lepeophtheirus salmonis)
ATGAACAAGGTTATTTCAGCTTTATTTTTCTTGGTCGCAACTGCTCTTGC
AAAACCAAATGATGGCATCGCCAAAAGAATCATGGATATGAGACTTATGT
ATCCTAATCAANNNNNNNNNNNNNNNNNNNNNNNNAGAGCCTAACGCTTT
TCCCTATCAGCTTTCTCTACGAACAGGTGGTTTACTTTCATATCATTTCT
GTGGTGCATCCATATATGACGAAGTAAGGTACTTTATTCATGTTATTTCT
GGGTAATATCTTTTTTAACAGTAGAAAACAGCTATTACTGCAGCACATTG
CTGTCGAAATCTTCCTAAAAATGCTAAAGTTGTAGCAGGAGATCATTCTC
AACTTTCTTTAGAAGGATTTGAGCAAAGAATCCGAGTCAAATCCTATGTC
ATACATCCTGATTTTGGAACCTCTGGCGTAAATAATGATATTTGTATTCT
ACATCTCGAAAAACCTCTTAAATTCAACGAGTTAGTTTTTTTCTTCTTAC
AATGTGTTCATAATTAACCTTGAGTATCTTCTTAGTAAAGTAGCAAAGAT
TGCAATGCCTGACCAAAATCAANNNNTTTGAAGGAGATGCTGTCATCTCA
GGATGGGGAACTACCTATTCTGGAGCACCTCCATCATTTGTTMTAMGATG
GGCTAAAGTTAATATTGTGTCAAAAGCAGGTAAATGTTTCAGTTTCAATG
ATTAAACATATTTTATTTCAATTTAGTTTATTGATATTTCTGATTTAATT
CCTTAGAATGTCAAAATGCTTATGGAAGCCTACTTGACGATTCAATGATC
TGTGCTGCAGCACCGGGTAAGGATTCTTGTCAAGGAGACTCAGGTGGTCC
AATGGTTTGTGATGGAGTACAATGTGGTGTTGTTTCATGGGGATATGGAT
GTGCTGCTCCAAAATACCCTGGTGTCTATACTAAATTGAGCAAATTTATG
GATTGGGTTAAAGAAAATGTTTAAATTTAGAACTAAATAAACTTGATGCT
CCATTTCTAATAACCTTTTAGCGTTTTTCATTTCTTTTTCAAAAACAAAA
TTATATTTAATGTACATCTTATAAGTGTTCTTTATTCAATCAAAAACCAG
GC
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