EMLSAT00000005455, EMLSAT00000005455-701302 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005455
Unique NameEMLSAT00000005455-701302
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s293supercontigLSalAtl2s293:25561..26774 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005455 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005455EMLSAG00000005455-688221Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000023877EMLSAE00000023877-732805Lepeophtheirus salmonisexon
EMLSAE00000023878EMLSAE00000023878-732806Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769727auto769727Lepeophtheirus salmonispolypeptide
EMLSAP00000005455EMLSAP00000005455Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005455

>EMLSAP00000005455 ID=EMLSAP00000005455|Name=EMLSAP00000005455|organism=Lepeophtheirus salmonis|type=polypeptide|length=296bp
MNVRVLGLSIIVSGKYPCTXPGFFRDPDNCQHFYRCVNWYGNYFTSFAFN
CPLGTAFDESISVCNHIGLVSECSKSKPLVVFNPIPTPESSASKPIRKPV
TPPFTVPNPPLNTPKPPTLFNPFLTSKRPFTPPHPTTTASTTTSFTTTXS
NTPRPFVPLFIDNVDDLTTTQKTVPINEPSTPINSSAYEVDPLSLYACPE
PGFYPYERNCNEFYVCQEVLPGILISEQLYSCPKRYLFDEVTSRCQRASK
VTCIKFESLSPESDEISAKRGILVVHEQFLDLFFSTPLDYNEHFNR
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mRNA from alignment at LSalAtl2s293:25561..26774-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005455-701302 ID=EMLSAT00000005455-701302|Name=EMLSAT00000005455|organism=Lepeophtheirus salmonis|type=mRNA|length=1214bp|location=Sequence derived from alignment at LSalAtl2s293:25561..26774- (Lepeophtheirus salmonis)
TGATGAATGTTCGGGGTATGAAACCAGGAGGGAGGGAAGCAGACCTTTGT
CCGTCGAAGCGCTATTCTTCCAAGTATGTACTMCTGCCGTTTGTTTTTGA
AGCACGCCTCACTCCTTCTAGCAAAGTGACAACCAACAAAAAAATCCGTG
GTTTTTAAACATACAAATTGAAATAAAGATTCCTCAGTTTAACTCAATCC
TTCGTTTGCTCTATAAGTCATGTTTTTTCCAGTTTCATAAATAGTCATAG
ATTTACATTGCGTTTCATTTTTTTTTTTTTTTAGAATTAAAGCTGATCCA
TATTTCTTTTCAATATGCTACGCCTTTGTTTCATAGTTTTAGGACTCTCA
ATCATAGTGTCTGGGAAATATCCTTGCACCWCTCCCGGATTCTTCCGTGA
TCCAGACAACTGTCAGCATTTTTATCGATGTGTTAATTGGTACGGAAACT
ACTTTACGTCCTTTGCATTTAATTGCCCACTTGGAACGGCATTTGATGAA
TCCATAAGTGTATGTAATCACATTGGTCTCGTATCCGAGTGTAGTAAATC
AAAACCCCTTGTTGTATTTAACCCAATTCCTACCCCGGAATCCAGTGCTT
CCAAACCCATTCGAAAACCTGTTACTCCCCCTTTTACTGTTCCGAATCCA
CCTCTTAACACACCAAAGCCTCCAACCCTCTTCAATCCTTTCCTTACCTC
AAAAAGACCCTTCACTCCCCCACACCCCACTACAACAGCCTCCACAACAA
CATCCTTTACAACTACGMCATCCAATACCCCGCGTCCTTTTGTTCCTTTG
TTTATAGACAACGTGGATGATCTCACAACTACTCAAAAGACTGTTCCCAT
CAATGAGCCATCTACCCCCATCAACTCTTCCGCATACGAAGTGGATCCCC
TAAGCCTCTATGCCTGTCCAGAGCCGGGATTTTACCCCTATGAGAGAAAC
TGCAATGAGTTTTACGTTTGTCAAGAAGTCCTTCCAGGGATCCTCATTTC
GGAGCAACTCTATAGTTGTCCAAAACGATATCTCTTTGATGAAGTCACAT
CTCGTTGCCAAAGAGCATCAAAAGTGACTTGTATCAAATTTGAGTCCTTA
TCTCCTGAGTCTGATGAAATCAGTGCCAAAAGGGGCATCCTTGTCGTTCA
TGAACAGTTTTTGGACCTCTTTTTCTCTACGCCCCTGGACTACAATGAAC
ATTTTAATAGATAG
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