EMLSAT00000005641, EMLSAT00000005641-701488 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005641
Unique NameEMLSAT00000005641-701488
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s303supercontigLSalAtl2s303:362466..370455 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005641 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005641EMLSAG00000005641-688407Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000024674EMLSAE00000024674-733602Lepeophtheirus salmonisexon
EMLSAE00000024675EMLSAE00000024675-733603Lepeophtheirus salmonisexon
EMLSAE00000024676EMLSAE00000024676-733604Lepeophtheirus salmonisexon
EMLSAE00000024677EMLSAE00000024677-733605Lepeophtheirus salmonisexon
EMLSAE00000024678EMLSAE00000024678-733606Lepeophtheirus salmonisexon
EMLSAE00000024679EMLSAE00000024679-733607Lepeophtheirus salmonisexon
EMLSAE00000024680EMLSAE00000024680-733608Lepeophtheirus salmonisexon
EMLSAE00000024681EMLSAE00000024681-733609Lepeophtheirus salmonisexon
EMLSAE00000024682EMLSAE00000024682-733610Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776870auto776870Lepeophtheirus salmonispolypeptide
EMLSAP00000005641EMLSAP00000005641Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005641

>EMLSAP00000005641 ID=EMLSAP00000005641|Name=EMLSAP00000005641|organism=Lepeophtheirus salmonis|type=polypeptide|length=1155bp
MYSRVVRLFIRKRDGLILAKKFNSSFNQVNPVVFIDGVNVYRPSFSQGFE
HISKFRDRKSVIESPMILKIVHESNSFIESIRKEGIRPWNWFDVSLAKRL
TVYAKSGIFPSDSLNVIYDLESLKKEFSEVNSILCSDLRELLQEFNFSPP
THCLTNRTVLIQNESSKMNVVSKARSFPFYKRIVSSKFNNSILLITDSPN
NANELRNVLSNSYENVQCNSNFSNNDILERIEFDLLNAGYIMKADQISSI
VKRIISIKTPIALDFCLFDANHSLYPEVSLRRKIALKMCIPGYPELRFHL
NSTSIEKGGLGDLFAKSEVVKIFQNTESRQPTVMGLRLLRELSKAIPKGI
FNINFAIQTLNHVYYGDYLEIRSSGPTKYYSYCKSVKNFVMPIDFCKGAL
PQMLALYFYFSGLVMNREMIKLIEERSDIELEFSGQLEIAYKRKTDFFHR
YCYRAIHIQDLRSNSTPTSLNENIDECFKELETPIESKLLKSPFGVVRLC
KNAATLNESPFLSQDQLIVAEQKYQLKISPIGENENVHKKYTKRFIQYGE
FLPKWFRILNMSGRGKGGKVKGKAKSRXSRAGLQFPVGRIHRLLRKGNYA
ERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRND
EELNKLLAGXTIAQGGXLPNIQALLFLKKYANKFARIKTKCFISKRKSHC
EALYYQNKIMLSFSIPIFILISLSTIKTEPVLNPEAKTIQDNEEVRQQAA
NICSCGLKIIMNGTDSFFLKSPNYTNNPCLWEFHVLPGVSVEINCFIHGI
KGVQMSPSKCMPKGDSFSISVHGKTEAHCNPFHHFSKYFEGSPKDKGYTI
FMDFKRHEVIEMEGQSFECSINGNLINQKKSKLMRGLNRFKEDLSQNKCG
QMKVPLTRMTNGEIISPEKYPWIVPLSIEGDKLCGGTILGDHWILTSAHC
VAKAHWAKVYFGVREYGFYEETQISQEFIIHPEYDFPHHDLALIKLPKRI
VYTPFVQPVCLPTKESLDKNYKGFGWXTISDDETGASRYLRGTILKEIEV
EDCRNKYRNPQISHNIICIQSPNTCLEEQNEDSETDFSVSILGQIYENRF
IIYGIASFSSNTCNESYPIGFTRLFPHTKWIMKQLNHPTTSVQLLPTFDV
LDHGF
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mRNA from alignment at LSalAtl2s303:362466..370455+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005641-701488 ID=EMLSAT00000005641-701488|Name=EMLSAT00000005641|organism=Lepeophtheirus salmonis|type=mRNA|length=7990bp|location=Sequence derived from alignment at LSalAtl2s303:362466..370455+ (Lepeophtheirus salmonis)
TTTATTTTAACGTGAAAATGGGAATGATATTTATTTCAGAATATAGTTAG ACTTACTCTTTATTACCATTAATAATTATAATGAATTTGGAGAAGTAACT CAAATTCATCATGTATTCGAGAGTAGTTCGGTTATTTATTCGTAAGAGGG ATGGTTTAATTCTGGCGAAAAAGTTTAATAGTTCCTTTAATCAAGTCAAT CCCGTCGTTTTTATAGATGGAGTCAATGTTTATCGACCCTCCTTTTCGCA AGGCTTCGAGGTAACTTTTTCTTATCTTATTATATGAACCCCTAAGAAGA TCCTTGTTTTTATTCCAGCATATTTCCAAATTTCGAGATCGCAAATCTGT TATAGAATCCCCAATGATTCTTAAAATAGTGCATGAATCAAATTCATTTA TTGAGTCCATTCGAAAAGAAGGGATTCGTCCATGGAATTGGTTCGATGTA TCTTTAGCAAAACGCTTGACAGTGTATGCGAAGTCTGGTATCTTCCCTTC AGATTCTCTTAATGTGATTTATGATTTAGAATCCTTGAAGAAGGAATTTA GTGAGGTTAATTCAATATTATGCTCTGACTTACGTGAGTTACTTCAGGAA TTTAATTTTAGTCCTCCAACCCATTGCTTAACTAATAGAACTGTACTCAT TCAGAATGAGTCCTCTAAAATGAACGTTGTGTCCAAAGCACGATCTTTTC CATTCTACAAGCGAATTGTATCTTCAAAATTTAATAATTCAATCCTCTTG ATTACGGATTCTCCAAATAATGCAAATGAATTAAGGAACGTTTTGTCCAA TTCTTATGAAAATGTACAGTGTAATTCGAACTTTTCTAATAATGATATCC TCGAAAGAATTGAATTCGATCTATTAAACGCTGGCTACATTATGAAAGCG GATCAAATATCCAGTATTGTGAAACGAATCATTTCTATTAAAACGCCTAT TGCATTAGACTTTTGCTTATTTGACGCTAACCATTCGCTATACCCAGAAG TTTCATTAAGAAGAAAGATTGCTTTGAAGATGTGCATACCGGGTTATCCA GAGCTTCGATTTCATTTAAACTCAACTTCCATCGAAAAAGGTGGCTTAGG TGACCTATTTGCCAAATCAGAAGTTGTCAAAATTTTTCAGAATACGGAGA GTCGTCAACCCACCGTCATGGGTTTAAGGTATGATTTGTACAAGTAACTG AACCATCTCGTCACTATTATCCCTTGTAGATTATTAAGAGAGCTGAGTAA AGCTATTCCAAAGGGGATTTTCAATATAAACTTTGCTATTCAAACTCTTA ATCATGTATATTATGGAGATTATTTGGAAATACGGAGCTCGGGTCCAACA AAATATTATTCTTATTGTAAATCTGTAAAAAACTTTGTAATGCCAATTGA TTTCTGTAAAGGAGCCCTACCTCAAATGCTAGCATTGTACTTTTATTTTA GTGGATTGGTTATGAATCGTGAAATGATCAAGTTAATAGAAGAGCGCTCC GACATTGAATTGGAGTTTAGTGGTCAGCTGGAAATTGCATATAAAAGAAA AACTGACTTTTTTCATCGATATTGTTATAGGTATTTTTTATTTATGCTTA TAGTTATTATAGTATTTATCTACAAATTCTTTATTTATAGGGCTATTCAC ATTCAGGATCTCCGCTCTAATTCAACACCCACCTCACTTAATGAAAACAT AGACGAATGCTTCAAAGAGTTAGAGACTCCGATTGAGAGCAAGCTTTTAA AGTCACCTTTTGGAGTTGTTCGATTGTGCAAAAATGCTGCTACACTCAAC GAATCTCCATTTCTCAGTCAGGATCAATTAATAGTAGCTGAACAAAAATA TCAACTCAAAATCTCTCCTATTGGAGAGAATGAAAACGTGCACAAGAAGT ACACTAAGCGATTCATTCAGTATGGAGAGTTTCTCCCAAAATGGGTAAAA TATGCAGAATCTTTTAAACAAAAAAAAGAGGTTATTCGATGAATTTGAAG TTTTAGACGACAAGTTATTTTAAAAATCTTGATTGTGTCCAGAATAATAT CTGTATAATATTTTTTCTGCATTTTAGTTTCGATTCTCAGTAAACTTTTA TAAAATTATTATTAGATAAGATAAGTTAGATTTACGATTCCATTTGTTTC AACTACATGGTATAAAAGATGCAAATTCTTTTTTCTTTCCTTTTTTTCAT TTAATTATTCAGATGGAGTTTCATTGGTTAAGTATAAGTTAACACTATAG TGGTAAAATTATTCCATCTTACATAGGAGTCGTCTTTAAAGTCCATACTT ATAGATGAAGAATATTTCCTTCTCTATGAGCCACCGAGTATCTTCGAGTT TAAGAGAAGAATTTCTCTTGAGTACGTTGCTCCATTTTATATTAAATTGT AAGGAATCTTTCGTATAATCATACAATCAATCCTTTTTGGATTAAAATTG AAACAAATAAGAATACTTTTTTTTATTAATATTAATTGTTTTACAAATTG AAGTAATTTCTAACTAAAGAAATAAATTCAAGGAAATTTTACTAGTTGTT AAAATCAAGAATCGTAAATAGATCAATCTGAAATAAGTATAATATAAAAT TGCTTCTGAAGCTTCGTTCCGAAACTAGCAAATTCTCAATAGATCCACTA CTATTAAAATAAAATATTCCTTAAATGTTGAAAACATACATTATATCTCG TCATTTGAATTTCTTTTCTTGAAAGTCAAAGGTATCAAGTTCAAATCAAG TCATAAGTTCTTCCTCTATGTTTATCGTCAGTTGTAGGATGTATTCCGAA AAATAAGTTAATGAAGTTACTCTTCAGCAATTCCAGCGTCAGAACCAATA TATTTCGTGTCGTACGAACATAATTAAGCATTGGCAAGGGGGGGTTTTAG CAAATGATTTATCTAAATTGCGAGCAAGTGGGATATATAATTCTCCATAG GAAGATTGATAAAGTAACAACACAAGGGTTAGATTAAGTGAACCCACACC AACAATACTATAGCCAATCAATCCTAATAAAGTATCTTTAACTCAGATTT CGTAATCTTGAGTCAATAAGTCGAAATAGAGGGTAGACAATTAGAGATGC TATTATGTGCTATTTCTCCCGAAAATGATTAAAATATCCATCAGTTATTG TGTTAAAAGTAGTCATATGATGAAGTAAATATGCTTAATTCAAAGAATGT ATTTGACGATTTATCAATATCTCGAGCAGTTTAACAATTTGTTATACCAA AATTTCTATATTTAGGCAAAATATGAATGTAACTCATTAATTGAATTTTA TGTTTTTCACATCTATTATATACAGTATAAACAGGGTGTAATTTCATATT TTATTTTCAGGAAGGACTGATCTCATCATATTCCTGGACTTTTTAATAGT AAACTAAAATTCTGGGTCTTTGCAGGACAAATAGTTGAAGATCAACTAAT AATAAAAGTAAAATTGGAAGTTAAGAGAGACCAAAATAGGTTCCCTTCAT TCATGATGTCCCAGTTACATTAAACGACATCATTCTTTAGAATTAATCTT GGTATCAATTAACTCTTTATCATTTAATGTCACTATCACTTTTATAAATC ATAATTTAATGACTTGAGAAAAAGCCTAAGATTCCATATCCAATACCGTA TTAGGCATATCGATATTTATGGTTTAGGATTCTAAACCATAATTAAAGTA CCTTAATGATTCAAGAAATGTACTACAAAATATATTATAAACAGAAATTG AGTTTTTTAAGAAACATTATTTCCTTGCTTCCTATTGGTGGAAATTGAAT CCACTTTATTTATACAGATGTGTGCTCCTTTTTTTGTTAACGCACACTCT CAATCCTCTTTTTTGAGTATAAATTCATTCGTAGCTCTCTTCTAGATAAT CATTTATCTTAATAGTTGAGGATACACATTAAAGTTTCGAATATTAAATA TGTCTGGKCGTGGTAAAGGAGGCAAAGTTAAGGGGAAGGCAAAGTCTCGT YCCAGCCGTGCTGGTCTTCAATTCCCTGTTGGTCGTATCCATCGTCTTTT GAGAAAGGGAAATTATGCTGAGCGTGTGGGCGCCGGCGCTCCCGTCTACT TGGCTGCTGTCATGGAATACCTCGCCGCTGAAGTCCTTGAACTGGCAGGC AATGCTGCCCGTGACAACAAGAAGACTCGTATCATCCCTCGTCATCTTCA ATTGGCGATTCGTAATGACGAAGAGCTGAACAAATTATTGGCTGGKGKGA CCATTGCTCAAGGTGGRGKCCTTCCTAACATCCAAGCTGTTCTCTTACCC AAGAAGACCGAGAAGTCTTCTTAAACTTGTAATTAATCAATTACACTGAA CCAGTCCTTATGAGGCCACCTCTTATTCTCCGAGAGACATTAATTAGCTT CAATTGTCTAGATTTACTGTATTAGTACAGTATAAACTATAAACCTATCT TACATTATGTTAAATCATAAAGCTAATGGAAATTAAATTTCTATGATACA ATTGCTCAATCATTGTAAAGTCACATACCAATAAAATAGTAAAAAGATAA TTATTAATGTATTTTCTTAACATGACTAAAATATAAACTAAGCATCCTCA AATTGAACAAAGTATCTAGGATAATTAATAAACATCTGTGATTAAGGCAT CATGAGATAAAYCCTCCAGTAATGGMCTYTATCCATAATAATGCCTATCA ATCCTACTACATAGGTCCTCAAGGTTAGGATACTTTCTAACAATAGCAGA GAGTCCATCGCACGGTAGTTTAGTCGTAACAATAGTGAAAAGGTGTCCAA AAACGATGGCATCCAACTCAGTCGGACTGTAACATGATCAATAAATAGCA AGAAATTAGATATACGTACGTTATTACAAAATAAACGTACTTGTCTCCAA AAAAGAACAGTCCATCTCCAAGTCTGGAACTAAGAGATTTGCAGCAAGAA TCCACTTCCTCATAGACGTCCTGTATGGTCTTGTTTCCATATCCATAGAC TTTGAGTTTCTTAAGGACTTCTCTTCGCTTTAGCCAAGTGAGGATGGTGT TGAGAGGCCACGGATGAGCACAACCATATCTCCATTTTGTCACTTCATTG AAATTTAGTTCATCAGCCCATGTGATGAAGTTCTAGGGATAAAATGTATT GACGGAAGTAAATAAAGAAATGCTCTCTTGGGGAGAGTGCTACAAGTATA TAACAATTAGTCTCTTAATGGCAATATATAAACAAGAGTAGTACAAGTCA TATATACATATGTAAATCAAACCTTTTTTGTAAAATGAGTATTGTAATAT ATGTAAATATTAAAGAATCCCATTAAAATGTTAATTGCTAAACGAATTAC TTATTCATGAATGTAGCTCTCAAGGTGAAAACATTAAAAGACACCGACAT CGTTTATAATAAGCAAAATGTATACCCTAGAATAATAAAAGTACTAATAA ATGTCACTGCTTACTTCTGCGTTACCCAAAACATTTTCCACAAGTGTCAT ATACGCCTTCATATCCGCCTTTTGATCCATGTCCAAATGTTTGCACAATG AGATCCCCTAATAATATAAATTAAATGCAATTAATATATATTTTATGTCA AACCGTTTATAACACTACTTATAAATTTAATGTTACATTAGTAATACATG TTCGTCATCTAGTCCGTGTATAATTTGAAATATGATTTAAAGAAACTAAA GTTATAACTAAAAAAATATTTTTATAGTTATTATTTTTGAAAAAGTATGC AAATAAATTTGCACGTATAAAAACGAAATGTTTCATTTCGAAGAGAAAGA GTCACTGTGAAGCATTATATTACCAAAATAAAATAATGTTGAGTTTTTCC ATTCCCATAGTAAGCAACACACTGAAATTGAACATGCTATAAAATTAATC ATTATTTGTATACTTCATAGTTCATATTAATTTCCCTCTCCACTATAAAA ACTGAGCCTGTACTCAACCCAGAAGCCAAAACAATTCAAGATAATGAAGA GGTTAGACAACAAGCTGCGAATATTTGTTCTTGTGGTCTGAAAATAATAA TGAATGGAACGGATAGTTTCTTCTTAAAGTCTCCCAACTACACAAATAAT CCGTGTTTATGGGAATTCCATGTCCTTCCTGGGGTCTCTGTGGAAATTAA TTGTTTTATTCATGGAATAAAAGGAGTTCAAATGAGTCCTTCAAAATGCA TGCCTAAAGGAGATAGCTTTTCGATAAGTGTACATGGAAAAACAGAGGCG CATTGCAATCCATTTCATCATTTTTCTAAATATTTTGAGGGTTCTCCCAA GGGTAAAGAGTTATCATTCTATAATGTAAGTTCCCTAACACTAGGTTTTT TTTTCTTCTTCAGATAAGGGATATACGATTTTCATGGATTTTAAACGTCA TGAAGTCATCGAAATGGAAGGACAAAGCTTTGAATGCTCTATCAATGGAA ATTTAATAAATCAAAAGAAATCAAAACTGATGAGGGGCTTAAATCGCTTT AAAGAAGATCTGAGCCAAAATAAATGTGGACAGATGAAAGTTCCACTTAC ACGAATGACAAATGGAGAGATAATTTCACCAGAGAAATATCCATGGATTG TTCCCCTGAGCATTGAAGGTAATCACTGAACTAGTAACTAATGTATATAC AGATATAAAATATCATATTATCCTAATTAGGTGATAAATTGTGCGGAGGT ACAATCCTAGGAGATCACTGGATCCTAACATCTGCCCATTGCGTTGCTAA AGCCCATTGGGCAAAAGTCTATTTTGGTGTTCGTGAGTATGGATTCTACG AAGAAACCCAAATTTCACAAGAATTTATCATTCACCCCGAATATGACTTC CCTCATCATGACCTCGCTCTCATCAAGCTCCCAAAGAGAATAGTATATAC TCCTTTTGTGCAACCTGTATGTCTCCCTACAAAAGAATCATTGGATAAAA ACTACAAGGGTTTTGGATGGAGKACTATATCTGATGATGAGACAGGAGCT TCAAGATATTTGAGAGGAACCATCCTTAAAGAAATTGAAGTAGAGGATTG TCGAAATAAATATAGAAATCCTCAAATAAGCCATAATATCATTTGCATAC AATCCCCAAACACATGTCTCGAAGAACAAAATGAGGATTCAGAAACAGAT TTTTCTGTATCCATTTTAGGGCAAATATATGAAAATAGATTTATAATATA TGGAATAGCTTCTTTTTCATCCAATACTTGTAATGAGAGCTATCCAATAG GATTTACACGATTGTTCCCCCATACCAAATGGATAATGAAACAACTGAAT CATCCGACTACATCCGTGCAGTTACTTCCCACATTTGACGTTTTAGATCA CGGATTTTAAGAGTTTAACTATTATATTTTTACCTTGGAATTGGCGTGTG CAATGATGGGAGATATTTCCGCGATGACAAACTTTCCAGCCTTGATGAAA GGCACTTTACCTGAAGACAATTAAATGATGTATTAATGTAGTAACTAATT TATATTTTAAAGTATATTTAATATTTATGTATGATAAAATAAATTATTAC CAGAAGGGGACATTTCTGCGGCATTGGACATCATTACAACTGTGTATTCC AGATCACACATTCTGAGGAAAGTTTGAACACTCAGGACGGAGGAATTGTC TGCTAAAAGAATTTGAACATCTTCGTAGGGTTGGTAAAGTCGCACCTCAT TAGGCCAAGGCTCAGAAGCTAATTGCAAAAATTAGACAAAAGTCATTTAA TAAGTAATAATATTATTCTGATCAATATAAAACTTACATCCAATTTCCAT ACGGATTGTCTCTGTATATGTCTTTTTCGAGATACGTGAAGACGACATTT TTGTATATCAACAATACCCAAAGTGAGGGGAATTTATTTTATTTATTATG AAAAAAATGTATTGTGACCAATGAGGACCAAGTAGGGTTCTCATCTGACG GTTTTTTATCTTATCATTATCTAGCAATTATCACTTTAAA
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