EMLSAT00000005670, EMLSAT00000005670-701517 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005670
Unique NameEMLSAT00000005670-701517
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s307supercontigLSalAtl2s307:53823..54756 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005670 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005670EMLSAG00000005670-688436Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000024810EMLSAE00000024810-733738Lepeophtheirus salmonisexon
EMLSAE00000024811EMLSAE00000024811-733739Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770798auto770798Lepeophtheirus salmonispolypeptide
EMLSAP00000005670EMLSAP00000005670Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005670

>EMLSAP00000005670 ID=EMLSAP00000005670|Name=EMLSAP00000005670|organism=Lepeophtheirus salmonis|type=polypeptide|length=288bp
MTMGGISSLQKLHAYAWGHRDKRVDNWALMWSIYPTLFIILCYLILIKII
GPYFMKNRKPFEFKNIMQFYNAFQVGFSFWLFYYGISLGWATHYNWVCQP
VEKDATPNSLPMQMAEMVWWYYFSKFTEFVDTIIFVLRKKNNQVSFLHVF
HHSSMPLFSWILLRWAPGGHETFGGVINALVHVFMYSYYFLSSLGPSIAP
YLWWKKYLTIMQLIQFLLVLLKSSVILLGIVDCGFPWQISLMSLSIIIPF
IGLFSNFFVVEYSKRKNAYLKKNNDPNSNYLVDIKKSS
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mRNA from alignment at LSalAtl2s307:53823..54756-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005670-701517 ID=EMLSAT00000005670-701517|Name=EMLSAT00000005670|organism=Lepeophtheirus salmonis|type=mRNA|length=934bp|location=Sequence derived from alignment at LSalAtl2s307:53823..54756- (Lepeophtheirus salmonis)
ATGACTATGGGTGGAATATCGTCTCTTCAAAAACTACATGCCTATGCTTG
GGGACATCGTGATAAACGAGTGGATAATTGGGCATTGATGTGGAGTATTT
ACCCAACTCTCTTCATTATTTTATGTTATCTTATCTTGATTAAGATTATT
GGGCCATATTTTATGAAAAACAGAAAGCCGTTTGAGTTTAAAAATATTAT
GCAGTTCTATAACGCATTCCAAGTTGGTTTTAGTTTCTGGCTTTTCTACT
ATGGAATATCTCTAGGGTGGGCTACGCATTATAATTGGGGTAAAGTAATC
CTAATATATACATAATTGGAAATTGAATCTTGAGACAATATATTATTTTC
TTTTAGTTTGCCAACCTGTAGAAAAGGATGCAACTCCAAACTCACTCCCG
ATGCAAATGGCAGAAATGGTCTGGTGGTACTATTTCAGCAAATTTACGGA
ATTTGTGGATACAATAATCTTTGTACTAAGGAAAAAAAATAATCAAGTTT
CATTTCTTCATGTATTTCATCATTCTTCCATGCCTTTATTTTCATGGATT
TTACTTCGATGGGCTCCTGGAGGGCATGAAACCTTTGGAGGAGTCATTAA
TGCTCTAGTTCACGTTTTCATGTATTCTTATTACTTTTTGTCATCCCTTG
GACCATCCATTGCTCCTTATTTATGGTGGAAAAAGTATTTGACCATTATG
CAACTAATTCAATTTCTTTTGGTTCTTTTGAAAAGCTCCGTTATATTATT
GGGAATTGTAGATTGTGGATTCCCTTGGCAAATAAGTTTGATGTCATTGA
GCATCATCATTCCATTCATTGGACTATTTTCGAACTTCTTTGTGGTCGAA
TATTCAAAAAGAAAGAACGCCTATTTAAAGAAAAATAATGATCCCAATAG
TAATTATTTAGTAGATATTAAGAAATCAAGTTAA
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