EMLSAT00000005702, EMLSAT00000005702-701549 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005702
Unique NameEMLSAT00000005702-701549
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: -Missing-
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
AT F394 + F149 female
  1. PreAdult2
No Visible Phenotype
-Missing-
01.10.2018 - 12:00
30.10.2018 - 12:00
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s309supercontigLSalAtl2s309:326623..333557 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005702 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005702EMLSAG00000005702-688468Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000024932EMLSAE00000024932-733860Lepeophtheirus salmonisexon
EMLSAE00000024933EMLSAE00000024933-733861Lepeophtheirus salmonisexon
EMLSAE00000024934EMLSAE00000024934-733862Lepeophtheirus salmonisexon
EMLSAE00000024935EMLSAE00000024935-733863Lepeophtheirus salmonisexon
EMLSAE00000024936EMLSAE00000024936-733864Lepeophtheirus salmonisexon
EMLSAE00000024937EMLSAE00000024937-733865Lepeophtheirus salmonisexon
EMLSAE00000024938EMLSAE00000024938-733866Lepeophtheirus salmonisexon
EMLSAE00000024939EMLSAE00000024939-733867Lepeophtheirus salmonisexon
EMLSAE00000024940EMLSAE00000024940-733868Lepeophtheirus salmonisexon
EMLSAE00000024941EMLSAE00000024941-733869Lepeophtheirus salmonisexon
EMLSAE00000024942EMLSAE00000024942-733870Lepeophtheirus salmonisexon
EMLSAE00000024943EMLSAE00000024943-733871Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776421auto776421Lepeophtheirus salmonispolypeptide
EMLSAP00000005702EMLSAP00000005702Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005702

>EMLSAP00000005702 ID=EMLSAP00000005702|Name=EMLSAP00000005702|organism=Lepeophtheirus salmonis|type=polypeptide|length=1626bp
SAHSSRDSSPNYDKTTSPIHEYILPHHCKKLSCSFHSSYNYTLVRLLFTI
RMEPRNYQLELFDIAKDQNSIVYLGTGSGKTFIAIMMIKEFYGGXKNEEK
KIVMVVPSLPLAHQQSRVIDEQCKFARVGKIVGEDGVDLWDSSKWNEVIN
SLDIIVXIHQVLLDSLSHSFLTLSNISLLIFDECHHTFKDNPYNMIMKEH
YLTLKSTHPHKVPHILGLSASVVISQCDDELKFLREKKILEANLDSKIIT
TMDLDNYLRFVTQPHECLKQYHAPSLGTDISNIVDDGLIKIENEFENHII
FLKQEMRDSKDKISLLTTRAKSKKKLFNRTLNDISMLYNTLGMFAARIYV
YTMLQDTFPEIKLRCDEKYQFKLLQIVYDTFKSVEGIFQRKWNDFVGSDL
QKMYYFMSSKLKKLLEIFTEFVTDSQFSMQSFTAVVFVKRRESCKIIYEV
LKEILRLDSRFSFISPAYIIGQSMVELNPGSNEMKKMQDTITNFRSGRYN
LIVSTSVLEEGMDIKKCNLVIRFDEIDTYRSYVQSKGRARAKPSMYVIMC
STTDLPTMDMKLSSFRKIEQMSITECHTLPFELQKLNDFHEENEDNEEEE
DPYFVNPNDKTNSAMISPATSISLLHQYINSITTDKFTTLAPYWEYSRTT
SKPHNILLSVLEEPKYVCQVTLPHKTPLNFPVKGALRASRKKAKRSAALQ
ACTMLHQLGELDDKLIPKKKRIHEELEELDDGLDDDEDHAKPGTKRFRRY
YAQKKPLLSSSPILCASKVFIYTIDMHLVSITKHNPKRYSLYYPQETERK
LGLCLISPLSDIVMSNKITLYSRSGIVEVNILLANSHISGSTLVEKCGGL
NTLQKYTKLIYSDVLQVVTPWMEELTEKELLECRDPLIVPLLNGEIDKDF
ILKTISGQPYNDGDMTERVVSLLHKPDPQRYFVEEVIPELTPLSLINENT
TFVEYYSQKYGMKITDKSQPLIRLSNADAERFAYSEVVIEEKDNKLTKLG
NLDFYRTRWLAIPELVLAHSVPSSFWKDLKLLPYILERINQIQNSMTLLK
ELCSFEKGEPCSNKDLSFDFLTDLNSDAQTLSFNHFELFKSLTLTNAGEE
FDLERNEILGDAFLKIMTSIYLYFAINSKDEGYLSLYRSRIVGNRNLLRV
GEMIGDLQLGGVLNAVKLQPKLNWQVPFYNNLKSLEEEIVKMNRDFRKTV
LTSNEKFKSHNFLDGMNNSDLSRLKEILCCDNPNTSIFYNDIVNKLSEAR
GNTNYSESKAQLSSLRVFVPVNDKSIADALESIIGVYLLHYGCKATLRMM
ATKMGISLFPNVKVENNICGHSKLKVSQSLNWFVPPTNAIQDFGKKVVNH
EILNRLLLKLQYKTIEKIIGYEFKEKTFLLQAFTHSSFSSNKITDSYERL
EFLGDAILDYLVTSYIFIEFPTYGPGKVTDARSAVVNNVTLAILTIKSEL
YCHLLHSEPLILSRIDSMIANMEFDESNMNEFDFFKLKMSLLSETECPIL
EEVDVPKVLGDICESVLGAVFLDSGFDLKIVWNVFKRLCPNLDQIVALKP
KNYVTKLYELFPERISFGPSKKVGNKIEKTVSLRMKDDKVYKARGIGPKG
KIAKISACKCLIRGLVKIKELPSDVI
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mRNA from alignment at LSalAtl2s309:326623..333557-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005702-701549 ID=EMLSAT00000005702-701549|Name=EMLSAT00000005702|organism=Lepeophtheirus salmonis|type=mRNA|length=6935bp|location=Sequence derived from alignment at LSalAtl2s309:326623..333557- (Lepeophtheirus salmonis)
TCGGCCCACTCTTCTCGGGACTCGAGTCCGAATTACGACAAAACGACTTC TCCAATACACGAATATATACTACCACATGTAATAAGCAAATATTATTTAT TAATTTCATTGATGTAGATCTTTACTTTGAGGGATTGAATATCAATTATC ATTTAATCATTATCTAACAATTGCATTTCTTCCTTTCCTTCAAAATGGAG CATTTACTCAATTTCTATTTTCTATCTAATAATATAATTAAAGCTTCACA CAACTGAGTGAGTCATAACAAATATCAAAATGCATTCATTTACKAAGTTA TTGATTCGTCCACGTAGTAGACTCTTTGATAAAATAACTGATATCTGATG CAATCTTTATTAAACTCAATCTTCATCGCTCTACAATATATGTTTTTATT AGTATTACTATATTAGATGTAAGTAGATATCTTCCTCCTACTTCACTAAA TCCACCTCTACTTACTAACTAAAAATGACTATTAATCAAAACTATCACCA TGTCTGACGTCAATATATTCTCAGTCCATTATTTAGCATTGTAAAAAATT ATCTTGCTCCTTCCACTCTTCATATAATTATACACTCGTTCGATTACTCT TTACCATCAGAATGGAACCACGAAACTATCAGGTAATTGCATCAAAAACT CATTTTATTATTTTCCCTCAATTCAGTATTTCTTATTTTCCTGTTCCTTT GTACATAGTTGGAGCTATTTGATATAGCGAAAGATCAAAATTCAATTGTT TATCTAGGAACTGGAAGTGGGAAAACTTTTATAGCTATCATGATGATTAA AGAGTTTTATGGAGGGKCGAAAAACGAAGAGAAAAAGATTGTCATGGTTG TGCCAAGTCTTCCTTTAGCTCATCAACAATCCAGGTATAAGGTCGTCTCT TGTTTACAAAATTTGGATTGTAAAAAATGTTGACCTTTTATCATTACAGA GTAATAGATGAACAATGCAAATTTGCTCGTGTTGGAAAAATAGTAGGAGA AGATGGGGTAGATTTATGGGATTCTAGCAAGTGGAACGAAGTGATTAATT CATTAGACATTATAGTAATSATCCATCAAGTCCTACTTGATTCATTGTCT CACAGTTTTCTCACATTATCTAATATATCACTTTTAATTTTTGATGAATG CCACCACACATTTAAGGACAATCCTTATAATATGGTTTGTATAACCTTTT TTGCTTATATTATCTATTTTCCACTAATTATCAACATCATTTATTCATTT TATCAAATCAATTAGATAATGAAAGAGCATTATCTTACTCTTAAATCAAC ACATCCTCATAAAGTTCCACATATATTGGGCCTCTCTGCATCTGTCGTTA TTAGTCAATGTGACGATGAGCTCAAATTTTTAAGAGAAAAGAAGATTCTT GAGGCCAACCTTGACTCCAAGATTATAACAACCATGGATTTGGATAATTA CCTTCGGTGAGTGTCTATTCTTTAAATATGTACAATTTTGATCATTATAT TTTATTTATAAAATTTATTTAGATTCGTTACTCAACCACACGAGTGTTTA AAGCAGTATCATGCACCCTCACTGGGTACGGATATAAGCAATATTGTTGA TGATGGGCTGATTAAAATAGAAAATGAGTTTGAAAATCATATTATTTTCC TAAAGCAGGAAATGAGGGACTCCAAAGATAAAATTTCTTTATTGACAACA AGAGCAAAGTCTAAAAAAAAACTTTTCAATCGAACCCTTAATGATATCTC CATGCTTTATAACACATTGGGTAATTAATTCATGAGTATTATCATGATGA TGATCAAGTAACTCTTTTTTAGGAATGTTTGCGGCAAGGATATATGTTTA CACAATGCTACAAGACACTTTTCCCGAGATCAAACTCAGATGTGATGAAA AATATCAATTCAAACTTTTGCAAATTGTTTATGACACATTTAAATCTGTT GAGTAATGCCTTTAAAATATTATGAAACTATTGATAAACACAAATTATTT ATAATTTATATCATATTTCTTTATTAAGAGGGATATTCCAAAGGAAATGG AATGACTTCGTTGGAAGCGACCTTCAGAAAATGTATTACTTCATGTCATC AAAATTAAAGAAATTACTCGAAATTTTTACTGAGTTCGTTACAGACTCGC AATTTTCAATGCAATCTTTTACCGCAGTGGTTTTTGTAAAGAGACGAGAG AGTTGTAAAATTATATATGAAGTTCTTAAAGAAATATTACGATTAGACTC AAGATTCTCATTTATATCACCTGCTTATATCATTGGTCAATCCATGGTAG AATTAAATCCTGGAAGTAACGAAATGAAAAAAATGCAAGATACCATCACC AATTTTCGGAGTGGCCGATATAATCTAATAGTTTCAACCTCAGTTCTTGA GGAAGGAATGGATATCAAAAAATGTAATCTCGTTATTCGTTTTGATGAAA TTGATACTTATCGATCCTATGTTCAAGTAAGATTGTATAATACGCATATA TTCTAAACTAAGGCTTCTCAAACATTGGGGTTATTTAGCTTGGCTGGTTC ATAGGCAGAGTTTGAAATACTGAGAGGGGGGTTTCAAAAATAAAATAAAA TTGCATACTATGTATATAATATAAACGTCTATCATTATATATTAAATATT GATGATCTGCAAACTCCGCCTTTAGAGTGGATCAATTCCAGGGAGGGGGA TTTTAGCAAGTATTATATATATATATATAAATATATAATAAGTTTTCTTT GCTGGGAGATGTTCAAATGCTACCAGAAGTGGAGGGGGATGTGCACCTCC AAAAGTTTGAGAAGCACGATTCTGTAATTAATCAATTAAATATTATTTAT GTATATTCTTTCTTTATTTTTTTAGTCAAAGGGCCGAGCCAGAGCAAAGC CCTCAATGTACGTAATCATGTGTTCAACCACTGATTTACCTACAATGGAC ATGAAATTGAGTTCTTTTAGAAAAATTGAACAGATGTCCATTACTGAATG TCATACCCTGCCTTTTGAATTACAAAAATTAAATGATTTCCATGAAGAAA ATGAGGACAATGAGGAGGAAGAGGACCCTTATTTTGTAAATCCAAATGAT AAGACAAATTCTGCTATGATTTCYCCTGCCACATCCATTAGTTTACTCCA TCAATATATTAATTCAATTACTACAGACAAATTTACGACTCTTGCTCCCT ATTGGGAATATAGTCGCACCACATCAAAACCACATAATATCCTTTTATCA GTACTTGGTATGTTTTTTATACTTATATATATAATCATAATCATGGGTTG TGTTCTCCAATTTTAGCAACTGCAATTTTATTATTATTTTTATCATACAT CCATTGTGTCTTCTTAACAACAAACATATTTATTGTACAGTATTTCTTTT AGAGATAGATTGACTTTCAGTCGTGCCTGGCATCTGAAAATTTTACGTCT ATTGGTATCATTCTACAAATATTTAGTTACGTTCTTAATACAATATGATA TTAATACAGTGGACTAGTTAATTTCCACCCTTTAGTGTGATTTTAAAAAC ACACGATTTTTAGTTCGAAAAAAGTATTTTTCGGGGTAGGAGAGATTTGT TTTGCTTTTGTCCAAGAAAATATATCCATGAAGACATACCTAATTAGAAG CATTAGAAAATACAACCTGAAATAAAATGACGATACTCCTCCCTTCTTTA AGAAGTCTACACCCCATTACACTGCTTTAATTCAAGCATTGTGTATTTAA TTGCCAAAACTTAGAACTTAACCCAGGATATATGTATTAAAAATATGTAG AAATTTTATGAATCAATGTATATTTTAGAGGAACCAAAGTATGTATGCCA AGTAACTCTTCCTCATAAGACACCACTAAATTTTCCTGTAAAGGGTGCTC TACGAGCATCGCGAAAAAAGGCAAAAAGAAGTGCTGCTCTTCAGGCATGT ACCATGCTGCATCAATTGGGAGAATTAGATGATAAATTGATTCCAAAGAA AAAAAGAATACACGAAGAGCTTGAGGAGCTCGATGATGGCTTAGACGATG ATGAAGTAAGTAATCAATCAATTAATTGAGTTCATACGAGCTATAAATAT GTATTTAATGGATTCTAGGATCATGCAAAACCGGGTACTAAACGCTTCCG ACGTTATTATGCTCAAAAAAAGCCTTTATTAAGTAGCTCTCCTATTCTGT GTGCTTCCAAAGTATTCATATATACCATAGATATGCATCTTGTAAGCATA ACTAAGCACAATCCGAAGAGGTATTCTCTTTATTATCCACAAGAAACTGA GCGTAAGCTAGGATTATGTCTTATTTCACCATTGTCCGATATCGTTATGT CCAACAAAATTACTCTTTACTCCAGATCAGGGATTGTTGAAGTGAACATA CTATTAGCGAATTCCCATATATCCGGATCTACACTTGTAGAAAAATGTGG AGGTCTAAATACATTACAGAAATATACGAAACTAATATATAGTGATGTTC TTCAAGTTGTCACTCCATGGATGGAAGAGCTAACCGAAAAAGAGTTGCTG GAATGTAGGGATCCATTAATTGTGCCTCTTTTGAATGGAGAAATAGACAA AGATTTTATTCTTAAAACCATTTCTGGTCAACCCTACAATGACGGTGATA TGACTGAAAGAGTAGTTAGTCTCTTACACAAACCTGATCCTCAAAGATAT TTTGTTGAAGAAGTAATTCCTGAACTTACGCCTTTGTCATTAATAAATGA AAACACAACTTTTGTAGAGTATTACTCCCAAAAATATGGCATGAAAATAA CTGATAAGAGTCAACCATTAATACGACTTAGTAATGCAGATGCTGAACGA TTTGCGTATTCGGAAGTGGTAATCGAGGAAAAGGATAACAAATTGACAAA GTTAGGTAATTTGGATTTCTATCGTACAAGATGGCTTGCAATTCCTGAAC TTGTCTTGGCACACTCTGTTCCTTCTTCCTTCTGGAAAGACTTAAAACTG CTTCCGTATATTTTGGAGCGTATTAATCAAATTCAAAATTCTATGACACT TTTGAAAGAACTTTGCTCCTTTGAAAAGGGGGAACCTTGTTCAAATAAGG ATTTATCCTTTGATTTTTTAACAGATCTGAATTCTGATGCTCAAACTTTA AGCTTTAATCATTTTGAGCTATTTAAGTCCTTGACATTAACAAATGCAGG TGAAGAATTTGATTTGGAGAGGAATGAGATTTTAGGTGATGCATTTTTGA AGATCATGACCAGTATTTACTTGTACTTTGCGATTAACTCTAAGGATGAA GGTTATTTATCATTGTATAGATCCAGGATTGTGGGGAATAGAAATTTACT CCGAGTTGGTGAAATGATCGGTGACCTCCAATTAGGTGGTGTACTAAACG CCGTGAAATTACAACCAAAGCTTAACTGGCAAGTTCCCTTTTATAATAAC CTTAAATCCCTTGAAGAAGAAATTGTTAAAATGAACCGAGATTTTCGTAA AACTGTTCTTACTTCTAATGAAAAATTCAAGTCTCATAATTTCTTAGATG GAATGAATAATTCAGACTTAAGTAGACTGAAGGAAATATTATGCTGTGAT AACCCAAATACATCAATATTCTACAATGATATAGTCAATAAGTTGTCAGA AGCACGAGGAAACACGAATTATAGTGAATCCAAAGCTCAACTAAGTAGCT TAAGAGTCTTTGTTCCTGTCAATGACAAATCTATTGCTGATGCCCTTGAA TCCATCATCGGTGTTTATCTCCTTCATTATGGATGTAAGGCCACTCTTCG TATGATGGCGACTAAAATGGGTATAAGTTTGTTTCCTAATGTAAAGGTAG AAAACAATATTTGTGGGCATTCGAAACTGAAAGTATCTCAATCCTTGAAC TGGTTTGTTCCTCCTACTAATGCTATTCAAGATTTTGGCAAGAAAGTAGT CAACCATGAAATATTGAATCGATTACTGTTAAAGCTACAGTACAAAACTA TCGAAAAAATTATAGGATATGAATTCAAAGAAAAAACGTTCTTGTTACAA GCCTTCACACATTCCTCGTTTTCTTCCAATAAAATAACTGATTCGTATGA GAGGTTGGAATTTCTAGGAGATGCAATTTTAGATTATCTCGTCACTTCTT ACATTTTTATTGAATTTCCTACCTACGGTCCCGGAAAGGTAATTTATAAT TTTACATCTTATTATTACTGTATGACCTAGTGAAATGACTGCCTATGTTG AGAATGAACCTATTATGTTTGGACATAGTTATTATAATTAATTAATGATT AGTCATTAATAAAATCAGCATTTATTTTATTTTAGGTCACTGATGCCCGG TCGGCAGTTGTCAACAATGTAACATTGGCTATATTAACTATTAAATCAGA ACTCTATTGCCATTTACTTCATTCTGAACCATTAATTCTCTCCAGAATCG ACTCTATGATAGCCAATATGGAATTTGACGAATCAAATATGAATGAATTT GATTTTTTCAAGCTTAAAATGTCCCTACTTAGTGAAACTGAATGTCCCAT TTTAGAAGAAGTAGATGTGCCTAAAGTTCTGGGTGATATTTGTGAGTCTG TGCTTGGAGCTGTGTTTTTAGATTCTGGATTTGACTTAAAAATTGTTTGG AATGTCTTTAAGAGACTCTGTCCCAATTTGGATCAAATCGTAGCCCTAAA ACCAAAAAATTATGTGACGAAGCTCTATGAACTTTTTCCTGAAAGAATTT CCTTCGGTCCATCCAAAAAAGTTGGTAATAAAATTGAGAAAACTGTTTCA CTTCGAATGAAGGATGATAAAGTCTATAAGGCCCGTGGTATAGGTCCTAA AGGAAAGATAGCAAAAATTTCAGCATGCAAGTGTCTTATCAGAGGACTAG TAAAGATTAAAGAACTCCCTTCTGATGTCATATGA
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