EMLSAT00000005882, EMLSAT00000005882-701729 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005882
Unique NameEMLSAT00000005882-701729
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s3194supercontigLSalAtl2s3194:2307..3653 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005882 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005882EMLSAG00000005882-688648Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000025699EMLSAE00000025699-734627Lepeophtheirus salmonisexon
EMLSAE00000025700EMLSAE00000025700-734628Lepeophtheirus salmonisexon
EMLSAE00000025701EMLSAE00000025701-734629Lepeophtheirus salmonisexon
EMLSAE00000025702EMLSAE00000025702-734630Lepeophtheirus salmonisexon
EMLSAE00000025703EMLSAE00000025703-734631Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768244auto768244Lepeophtheirus salmonispolypeptide
EMLSAP00000005882EMLSAP00000005882Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005882

>EMLSAP00000005882 ID=EMLSAP00000005882|Name=EMLSAP00000005882|organism=Lepeophtheirus salmonis|type=polypeptide|length=281bp
MMKLFCAILLSIAFLQSSSAEYEDICGIENKEXSSKIIGGQEAEPNQFPW
VVAILMSSIFGSGRCTGSIVNKQYILTASHCVAQFDRFTISAGTHDYSKD
EPHQQIMLATESIPHPNFTNNMFEYHDDIALIKLEKELEFNDYVRPICLP
KYSDMEKTFADETVTSTGWGLIQGSPNPISVPQLHYVNGLRVIKNDVCAQ
TYGSLINEDLICIDSSDHKGVCNGDSGGPMNYEIEDGKYMQIGVADFVGG
KTCDDGKPEGFARVTSYLEWIEENTGRKIEA
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mRNA from alignment at LSalAtl2s3194:2307..3653+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005882-701729 ID=EMLSAT00000005882-701729|Name=EMLSAT00000005882|organism=Lepeophtheirus salmonis|type=mRNA|length=1347bp|location=Sequence derived from alignment at LSalAtl2s3194:2307..3653+ (Lepeophtheirus salmonis)
CCCCTTTATACTCTACTATGATTAGGCTAGTACCACATTAAACATGATGA
AGTTATTTTGTGCTATTTTGTTATCCATTGCATTCTTGGTAAGTGATTTT
TAAATGAATATCCTGAACTAACACTCAATATATTTCCCCTTCTAGCAATC
ATCTTCAGCTGAATATGAAGGTAAAAGCTAACCGAAACTGTTACATATTT
TAAATACTTTCTACTATGTATAATAGATATTTGCGGAATTGAAAACAAGG
AATTMTCATCGAAAATCATTGGTGGACAAGAAGCTGAGCCCAATCAATTT
CCATGGGTTGTTGCTATCCTAATGAGCAGCATTTTTGGCTCTGGTCGCTG
TACAGGATCCATTGTGAATAAGCAGTACATTCTCACTGCATCCCATTGTG
TTGCTCAATTTGATAGATTCACTATCTCTGCTGGAACTCATGATTATTCC
AAGGATGAACCTCACCAGCAAATAATGTTGGCCACTGAATCTATTCCTCA
CCCCAACTTTACCAACAACATGTTTGAATATCATGACGACATTGCTCTAA
TCAAACTAGAGAAGGAATTGGAGTTTAATGGTAATCTACTTTACTTATTC
TATAGCAAAAATGATGATGTTAATTGCAGATTATGTTAGACCCATTTGCT
TGCCCAAGTACTCCGATATGGAAAAAACTTTTGCTGATGAAACTGTCACG
TCCACTGGTTGGGGACTCATCCAAGGATCTCCAAATCCTATTAGTGTGCC
CCAATTACACTATGTCAACGGACTGAGAGTGATTAAAAATGATGTGTGTG
CTCAAACATATGGCTCATTGATCAATGAAGATTTGATTTGCATCGATTCC
TCTGATCATAAGGGTGTTTGTAATGTAAGTGACAATCAAGTCAATTGCAT
TCGATGTTATAAATAGCTTAAAAATTAATTCTTAGGGAGATAGTGGAGGT
CCAATGAATTATGAAATTGAAGATGGAAAATATATGCAAATCGGTGTTGC
AGACTTTGTTGGAGGAAAAACTTGCGATGATGGAAAGCCCGAAGGATTTG
CTCGAGTCACTTCTTACTTGGAGTGGATTGAAGAGAACACGGGAAGGAAA
ATTGAAGCTTAAGGCTTGAATAGTCCTATAAATAAATTTTGAGTAACTTA
TTTTATAATACCTCGAGCTTGATGAAAAAATAGTCATTTCACAATTAGAG
AAATAATAAAATATAAAATGGCTCAAAAGTCAAAATGTCTTACTTGATAA
TTTCCTGTATCTGGTAATAATCTGGTTTTTTTTATGAATTATATGTGATC
AAGAGACATATACACAACTATACACAATTCAAAGAACTTTTGAATTC
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