EMLSAT00000005973, EMLSAT00000005973-701820 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005973
Unique NameEMLSAT00000005973-701820
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s322supercontigLSalAtl2s322:1022100..1022765 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005973 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005973EMLSAG00000005973-688739Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000026056EMLSAE00000026056-734984Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780271auto780271Lepeophtheirus salmonispolypeptide
EMLSAP00000005973EMLSAP00000005973Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005973

>EMLSAP00000005973 ID=EMLSAP00000005973|Name=EMLSAP00000005973|organism=Lepeophtheirus salmonis|type=polypeptide|length=221bp
MFHYLLVTLPIFANAVFGDNLDPYHVPVYHPEPYQPPVHAPIPHHAPPAP
HYQHYDETPKAYAFKYDVNDEYRGTRYNVEESTDGKLTTGSYQVALPDGR
IQTVTYTVDGYSGFIADVHYDGVAIPPKHEPHPVYTPPPPPHYHPVHKQG
PIGPPPPPPHLFTPGSLAPTAVGSGPFASRAAGPAPLPLTPLPGLDSTPX
FRSGPSIDPTRGFGGAPNFGF
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mRNA from alignment at LSalAtl2s322:1022100..1022765+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005973-701820 ID=EMLSAT00000005973-701820|Name=EMLSAT00000005973|organism=Lepeophtheirus salmonis|type=mRNA|length=666bp|location=Sequence derived from alignment at LSalAtl2s322:1022100..1022765+ (Lepeophtheirus salmonis)
ATGTTTCATTATCTATTGGTTACATTGCCTATTTTTGCAAATGCCGTATT
TGGAGATAATTTAGATCCCTATCACGTGCCTGTTTATCATCCAGAGCCTT
ACCAACCTCCTGTCCATGCACCTATTCCACATCACGCTCCTCCAGCTCCT
CACTATCAACACTACGATGAAACACCAAAAGCCTACGCCTTCAAGTATGA
CGTGAATGATGAATATAGAGGAACCAGATACAATGTTGAAGAGTCTACTG
ATGGAAAGCTTACAACCGGATCCTATCAAGTTGCTCTCCCCGATGGTCGT
ATTCAAACCGTGACTTATACAGTAGATGGCTATAGTGGCTTTATTGCTGA
TGTTCACTACGATGGTGTCGCCATCCCTCCAAAACATGAACCTCATCCAG
TTTACACCCCACCTCCACCTCCTCACTACCATCCAGTTCATAAGCAAGGA
CCCATTGGTCCACCCCCTCCACCACCACATTTGTTTACTCCAGGTTCTCT
TGCTCCTACAGCTGTTGGATCAGGTCCTTTTGCTTCCAGAGCTGCTGGAC
CAGCTCCACTTCCGCTTACACCTCTTCCAGGCTTGGATTCTACTCCCMTA
TTCAGAAGTGGGCCATCCATAGATCCAACCAGAGGATTCGGAGGTGCACC
TAACTTTGGCTTTTAA
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