EMLSAT00000006030, EMLSAT00000006030-701877 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006030
Unique NameEMLSAT00000006030-701877
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s327supercontigLSalAtl2s327:308968..311912 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006030 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006030EMLSAG00000006030-688796Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000026303EMLSAE00000026303-735231Lepeophtheirus salmonisexon
EMLSAE00000026304EMLSAE00000026304-735232Lepeophtheirus salmonisexon
EMLSAE00000026305EMLSAE00000026305-735233Lepeophtheirus salmonisexon
EMLSAE00000026306EMLSAE00000026306-735234Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776177auto776177Lepeophtheirus salmonispolypeptide
EMLSAP00000006030EMLSAP00000006030Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006030

>EMLSAP00000006030 ID=EMLSAP00000006030|Name=EMLSAP00000006030|organism=Lepeophtheirus salmonis|type=polypeptide|length=386bp
MKILLIHFRIFIGFQTSLCLVASTKDFIIFQPHQIEGFVLNNPSNTSGQL
HGEESNRDNVLECPSNNVIKTRYRCKEGDLWTDCYRSSCCPDYNYVTGKC
FHESVDVCSLNLCPQRCSVYFGRVVCTCYNGFKFDRELHKQDPKNSCLDI
DECLEDDHGCDQICINTFGGFRCQCEPGFALDPLTNQTCIKVSAHAHRGQ
EKELEDQKGKFVMSSQVMELTARLTKKTDQLEEKLXSLNTAVKLYSFATG
PPGPTGPPGPEGPRGFPGYPENQSGSHLDDEDELDDYRVIRKPNGKRDFC
KCKRGPIGPPGAPGSDGLRGIIGPIGPEGPKGDPGSFDFIVLMIADLRSD
IIELQKRVFPSKAKNTKFDFENNLKKLVQLSNPNKN
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mRNA from alignment at LSalAtl2s327:308968..311912+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006030-701877 ID=EMLSAT00000006030-701877|Name=EMLSAT00000006030|organism=Lepeophtheirus salmonis|type=mRNA|length=2945bp|location=Sequence derived from alignment at LSalAtl2s327:308968..311912+ (Lepeophtheirus salmonis)
AAAAATGTTAGAGCCCCCTACTTCCTATTGCCTCTGTACGCTTCTTTGTG
AACGCATCTCCTCTGCTGCTAGCTAGGAGTACATTGCTAGAGAACAACTA
CGTCAATAGAGGATTATAATTGGAGCAACGCAAGTCMCAGCCATGAAGAT
CCTATTGATTCATTTTCGTATCTTTATCGGGTTCCAAACCTCCCTTTGCC
TTGTTGCAAGCACAAAGGACTTCATCATTTTCCAACCGCATCAAATTGAG
GGATTCGTTTTGAATAATCCTTCCAATACGTCAGGGCAGCTTCACGGGGA
AGAGTCGAATCGAGATAACGTTCTGGAATGTCCAAGCAACAATGTGATCA
AAACTCGATATCGCTGTAAAGTAATGTATATGTCGCGATATTGAATGAGC
AGTACTCATGTCTATGACAATTACCTAGGGGATTAATGATACAGTTTTGT
CATTTAGGCATGATCTTGGTTCTAATGTATATCTTTAAAAATATATTTAT
TTGTCGAAATGAGTAGTTATCGTCCTGATTAAAAAAAAATAAACTGTCAA
ATGTTTTTTTCCTGTCAGTTTTTTTTTATCAAAAAAAGATCATTCGCTCT
AATTTTTGTCTTTTCAGAAAAAAAATTTAAATCTAAAAATTCTTTGTCAA
ATTTAATCTTTTGTCTCCTTTTCAAATTTTATTTGTCAAATATGGCTACT
TAAAAAAGTAACATTTTGATATATTTCTTTTTTTCAATTTTTAAAGATTT
TATCTGCCATTTTTCCTATTTATAAAAAAAAAATTGTCAAGTGTTTTCTT
TTGCCATTTAAAAAAAAAAAAAATATTTGTGAAATTTCACTTTTTATAAA
GAATTGTTAAATATCACTTTATATAAAAAAAAAGTTTGTCAAAATTTGTT
CTTTTTTACTTATTTTAAATTTTATTTGTCAAATTTGCCATNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNCACTTCTTCCCCCCCCCCCCCCTAAGGAAAATTTCAGTCAAGGCCCTG
GTAGTACTCTGTTTACATCTTGATTTGTTTGTAGGAAGGTGACTTATGGA
CAGACTGCTATCGTTCGAGTTGTTGTCCAGACTATAATTATGTGACTGGG
AAATGCTTTCATGAGAGTGTGGACGTTTGCTCACTCAATCTCTGTCCACA
GAGATGTTCTGTTTATTTTGGACGTGTCGTATGTACCTGTTACAATGGAT
TTAAGTTTGATCGTGAGCTACACAAACAAGATCCCAAAAACTCCTGTCTG
GATATAGACGAGTGTCTGGAGGACGATCACGGATGTGACCAAGTATATAA
ATTTATTTATCAAAGAATGTAAGTATTTCATTGATTCCTCTATACTTTAG
ATCTGTATAAATACTTTTGGGGGATTTCGATGTCAGTGTGAGCCAGGCTT
TGCTCTTGATCCTCTTACGAATCAGACATGCATCAAAGTATCCGCTCACG
CTCATCGTGGACAAGAAAAGGAATTGGAGGATCAGAAGGGAAAATTTGTT
ATGTCGTCTCAAGTCATGGAGCTAACCGCTCGTCTAACAAAGAAAACGGA
TCAGTTAGAAGAAAAGTTGAKCTCCCTTAATACTGCTGTTAAACTCTACA
GTTTTGCAACAGGTCCACCTGGACCAACAGGTCCTCCAGGGCCAGAAGGA
CCCAGAGGATTCCCTGGATATCCGGAAAATCAGTAAGGAAATTATCTATT
TTGAATAAATATGCATATATAAATTAGTATTGAGACTAAATCCGAGACTA
AGAGAATTGTTTTTAGACTGATCTGGACCGATTTTTTTTCTTTTTACAAA
AAGGTGATACATAACAATTTTATTTTCTTTAAAAAAAAAAGGATTTTTTA
TTGTGTGGCACGGATTTTGGGCGATTTTTTTTTGTGTAGAGCGAATTAGT
TCGTTCTACACAAAAAGTATAACGCCCCCTAGGATGTCCAGACCAAAATC
AAAATATATGTACCTTAGAGTGGTTTGATTTCCAACTTTTTTAGAGTATC
GACTTGGGTTAGTTCGCAAAAACTGTGATATGGTGAGGAACTAACCTATG
CAAAATTGTATGTTTCTATAATGTTATCTTTAGGTAGTACATCTCCTTCA
ATTTTGAGAGGAGACAGAAGATCTTTATTTCGTCAATAAAGATTAAAGTA
GAGCATTCATCATTATTTTGCATGTATTAATTATGATAGACATTATTCTA
ACCAATAACAATTTGATTTTTCCTTTCTGAAAATTTAAAGAAGGATGCGC
GCTATACACAGATAATCAAATTTTCATAACTTTTTTTTAATGTATATAGC
ATCTAAAATGTCTTCATACAATTATGCATAGTATTTAATGTAAATATTGC
TACTAAATCATTGCCTCACTCCTTTCATGACCTAGAAGTGGAAGTCATTT
GGATGACGAGGACGAACTGGATGACTATCGTGTGATCCGTAAACCAAATG
GTAAAAGAGATTTTTGTAAATGCAAAAGAGGACCTATTGGACCGCCAGGA
GCTCCTGGATCTGATGGATTAAGAGGAATAATAGGACCAATAGGTCCTGA
GGGCCCAAAAGGAGATCCTGGGTCATTTGATTTCATTGTTTTAATGATTG
CTGATCTACGCAGTGACATCATTGAGCTTCAAAAAAGAGTTTTCCCCTCA
AAAGCCAAGAATACGAAATTTGATTTTGAAAATAATTTGAAAAAGTTGGT
TCAACTCTCAAATCCAAATAAAAATTAACAAAGATAAATGAAAAGATGTT
ATCTTATGATTTTTATTTTTTTATTTTAATTGTACAAAATATAAAATAAG
CAATTGGGTAATTTCATTTAGTAAAATAGAAATAAACATTGTAGTTTAAA
ATTAGTATCCAAAGACAAAGCACTCTTTATTTACAAAAGTATACT
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