EMLSAT00000006156, EMLSAT00000006156-702003 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006156
Unique NameEMLSAT00000006156-702003
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s336supercontigLSalAtl2s336:420428..421924 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006156 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006156EMLSAG00000006156-688922Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000026881EMLSAE00000026881-735809Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777513auto777513Lepeophtheirus salmonispolypeptide
EMLSAP00000006156EMLSAP00000006156Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006156

>EMLSAP00000006156 ID=EMLSAP00000006156|Name=EMLSAP00000006156|organism=Lepeophtheirus salmonis|type=polypeptide|length=498bp
MSDDEDVQYVKRSRHVHFGSLAENVGSSVDGAAHVSQSSEYLPLSAHENG
GEDDGKREILEEFERRKRARAIPVPTDDDEIKRDLRTLGEPICLFGEGPA
DRRNRLRDFLSEFGEDAVKKRRDEAITVKEHEETTWYHEGPSSLRVARKW
IAKYSLPRAKERIARLKAEESARLKEEALEMARXQEIQKRLKSLDVVASQ
IADTRPISWCTFSPNSQYLLTGSWSGLCKLWSVPDCKEIRTLRGHSSNIG
SIVFNPHATLEGHSNKDPCMASCSQDGSVKLWNLESDEPIADIEGHDSRV
SRCAYHPSGRFLATCVYDNSWRLWDLEQLQEVLHQEGHSKPVHCIAFQND
GSLALTGGLDSFGRIWDLRTGQCIMFLEGHLKGIIGVDWSRDGYHCATGS
SDNACKIWDLRKRKIEYTIPAHTNVVSNVVFDEDYLLTASYDGTAKLWAR
KTWQPLASLKGHDLRLMDCAISPDRSYIATCSYDRTFKLWSXDIKQRL
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mRNA from alignment at LSalAtl2s336:420428..421924-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006156-702003 ID=EMLSAT00000006156-702003|Name=EMLSAT00000006156|organism=Lepeophtheirus salmonis|type=mRNA|length=1497bp|location=Sequence derived from alignment at LSalAtl2s336:420428..421924- (Lepeophtheirus salmonis)
ATGTCGGATGATGAAGATGTACAATATGTCAAAAGATCACGGCATGTCCA
TTTCGGATCACTGGCGGAGAATGTAGGAAGTAGTGTGGATGGAGCTGCAC
ACGTTTCTCAAAGTAGCGAATATTTGCCTCTAAGCGCTCACGAGAATGGT
GGAGAGGATGACGGGAAGAGGGAGATCCTGGAGGAGTTTGAGAGGCGAAA
GCGAGCTAGAGCTATTCCAGTGCCAACAGATGATGATGAGATTAAAAGAG
ATCTGCGCACGTTGGGTGAGCCCATTTGTTTGTTTGGAGAGGGGCCGGCG
GACCGGCGGAATCGTTTAAGAGACTTCCTTTCTGAATTCGGAGAAGACGC
GGTAAAGAAAAGGCGGGATGAGGCCATCACTGTCAAGGAACACGAGGAAA
CGACTTGGTATCACGAGGGACCCTCTTCTCTACGAGTAGCGCGGAAATGG
ATTGCAAAGTACTCGCTGCCCCGCGCCAAGGAAAGAATTGCCCGACTTAA
AGCTGAGGAGTCTGCTCGTCTCAAAGAGGAAGCTCTTGAAATGGCTCGCK
CTCAAGAGATCCAGAAAAGACTTAAAAGCCTTGATGTCGTAGCTTCCCAA
ATAGCTGATACAAGGCCCATTTCCTGGTGCACCTTTAGTCCCAATTCCCA
ATACCTCCTCACAGGCTCATGGTCGGGTCTATGCAAATTATGGTCTGTAC
CTGATTGCAAAGAAATTAGAACCCTTCGCGGACACTCCTCTAATATTGGG
TCTATTGTATTTAATCCTCATGCCACTCTTGAGGGACACTCAAATAAAGA
TCCTTGTATGGCCTCCTGTTCTCAAGATGGGTCTGTCAAGTTGTGGAATT
TAGAATCAGATGAGCCCATCGCTGATATTGAGGGCCATGATTCACGAGTT
TCGAGATGTGCTTATCATCCATCCGGAAGGTTTCTGGCTACTTGTGTCTA
TGATAATTCTTGGCGGCTTTGGGATTTAGAGCAGTTACAGGAAGTTCTTC
ATCAAGAAGGACATTCCAAGCCTGTTCACTGTATTGCATTTCAAAATGAT
GGATCCTTGGCTCTCACGGGTGGACTTGATTCATTTGGCCGCATATGGGA
TCTACGTACTGGACAATGCATCATGTTTCTTGAGGGACATCTGAAGGGTA
TTATTGGTGTTGACTGGAGTAGAGATGGTTATCATTGTGCGACAGGTTCT
TCAGATAACGCATGTAAGATCTGGGATCTTCGTAAAAGAAAAATTGAATA
CACTATTCCTGCTCATACCAATGTTGTCTCGAACGTAGTCTTTGATGAAG
ATTACTTACTCACTGCATCCTACGACGGCACTGCCAAACTATGGGCTCGA
AAAACATGGCAGCCCCTCGCATCATTGAAGGGCCATGATCTTCGTCTAAT
GGACTGTGCTATAAGTCCTGATAGGTCATATATTGCAACGTGCTCTTATG
ATCGTACTTTTAAACTATGGTCCKCTGACATTAAACAGAGACTTTAA
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