EMLSAT00000006370, EMLSAT00000006370-702217 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006370
Unique NameEMLSAT00000006370-702217
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s348supercontigLSalAtl2s348:387469..388765 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006370 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006370EMLSAG00000006370-689136Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000027818EMLSAE00000027818-736746Lepeophtheirus salmonisexon
EMLSAE00000027819EMLSAE00000027819-736747Lepeophtheirus salmonisexon
EMLSAE00000027820EMLSAE00000027820-736748Lepeophtheirus salmonisexon
EMLSAE00000027821EMLSAE00000027821-736749Lepeophtheirus salmonisexon
EMLSAE00000027822EMLSAE00000027822-736750Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777155auto777155Lepeophtheirus salmonispolypeptide
EMLSAP00000006370EMLSAP00000006370Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006370

>EMLSAP00000006370 ID=EMLSAP00000006370|Name=EMLSAP00000006370|organism=Lepeophtheirus salmonis|type=polypeptide|length=348bp
MKLLIQVTFFGLVSFALAKESPNENKRTAKSLVNVFPFNNRGSRENQNQN
HAQHHDHHDGHHDEVANAASSRDSRQNFLPPGNDVPLDIGSIAAAGERCI
DKVVTVEETEYDEHIECHHSYSERCHTTYTTDFEAQQEEECEENFKKSCF
IEYKKTAHEEEVQFCHTPFICEGEGPEECKTVFETECSTRYHEHDVQDDI
VDCETIQEEKCEDVTQGYTTEQKCTKWPRQVCQSRRENVKKYSPETECKK
VPRQLCGPSGCVARPGQEECFPKREVVVVEEPVETCNLEPQKACKQVTKL
VPSLKPTEECVDVPKEVCSRSRKNPRKVLKPXVKKWCYXPSAASGLAQ
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mRNA from alignment at LSalAtl2s348:387469..388765-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006370-702217 ID=EMLSAT00000006370-702217|Name=EMLSAT00000006370|organism=Lepeophtheirus salmonis|type=mRNA|length=1297bp|location=Sequence derived from alignment at LSalAtl2s348:387469..388765- (Lepeophtheirus salmonis)
ATGAAGCTTTTGATACAGGTAATTTCTCAAAAAATATTAGATTAGTTAAT
TATATTATTCATTGCTGAAGGTTACTTTCTTTGGCTTAGTATCTTTTGCG
TTAGCAAAAGAGAGTCCAAATGAAAACAAAAGGACAGCCAAGTCCCTTGT
CAATGTTTTCCCCTTCAATAATCGAGGATCCCGCGAAAATCAAAATCAAA
ATCATGCTCAACATCACGATCACCATGATGGACATCACGATGAAGTAGCA
AACGCCGCTTCTTCCAGAGATTCCCGTCAAAATTTTCTTCCTCCAGGAAA
CGATGTTCCCTTGGACATTGGTAGTATAGCCGCTGCTGGAGAGAGATGTA
TTGACAAAGTTGTGACTGTGGAGGAAACAGAGTATGACGAACATATTGAA
TGTCATCACAGCTATTCAGAAAGATGTCATACAACCTATACCACGGACTT
TGAGGCGCAACAAGAGGAGGAATGCGAGGAAAACTTTAAAAAGAGTTGTT
TTATCGAATATAAAAAGGTGAGTCAGGACGTTTTGTAGGATCATGCAATT
CTAATTAATTTTTACACTTATGCATATTTAAGACTGCCCATGAGGAAGAG
GTCCAATTTTGTCACACACCATTCATTTGTGAAGGTGAGGGGCCAGAGGA
ATGTAAGACGGTGTTTGAAACTGAATGTTCTACTCGCTATCACGAGCATG
ACGTTCAAGATGATATCGTAGATTGTGAGACTATCCAAGAAGAAAAATGT
GAGGACGTAACTCAAGGATATACCACGGAACAAAAGTGTACCAAGTGGCC
CAGACAAGTATTTTTCCTTGATCATGGAATACATTTTAAGCATTGAATCA
ACTCTATGTTTGATTAACTATAGGTCTGCCAAAGTAGACGAGAAAATGTG
AAAAAGTATAGTCCTGAAACTGAATGCAAGAAGGTACCTAGACAACTCTG
TGGCCCATCTGGATGTGTTGCTCGTCCTGGACAAGAAGAATGTTTCCCTA
AGCGTGAAGTTGTCGTTGTTGAGGTAAGAATGTATTTGCCTTGCTTAAAT
GTCTTATTAAATTATATAAATCTCTRTTATATATTCTCAGGAGCCTGTTG
AAACTTGTAATCTTGAGCCACAAAAAGCTTGTAAACAAGTCACAAAATTA
GTTCCCTCATTAAAACCAACAGAGGAATGTGTGGATGTTCCCAAGGAAGT
ATGTTCTAGATCAAGAAAGAATCCAAGAAAAGTACTGAAGCCTRTAGTCA
AGAAATGGTGCTATRTCCCATCCGCTGCCAGTGGTTTGGCCCAATAA
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