EMLSAT00000006446, EMLSAT00000006446-702293 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006446
Unique NameEMLSAT00000006446-702293
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s3528supercontigLSalAtl2s3528:7829..9665 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006446 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006446EMLSAG00000006446-689212Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000028144EMLSAE00000028144-737072Lepeophtheirus salmonisexon
EMLSAE00000028145EMLSAE00000028145-737073Lepeophtheirus salmonisexon
EMLSAE00000028146EMLSAE00000028146-737074Lepeophtheirus salmonisexon
EMLSAE00000028147EMLSAE00000028147-737075Lepeophtheirus salmonisexon
EMLSAE00000028148EMLSAE00000028148-737076Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768746auto768746Lepeophtheirus salmonispolypeptide
EMLSAP00000006446EMLSAP00000006446Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006446

>EMLSAP00000006446 ID=EMLSAP00000006446|Name=EMLSAP00000006446|organism=Lepeophtheirus salmonis|type=polypeptide|length=346bp
MWYKYIVLFVFTTFEGTYSELSHAQCRIIHDKYSYNGIGSRNLLGGKVWP
NNTVPYTLAQGFSKTDLSLIQSAMDEIENKTCVRWVPRNGEKNYVYIKNN
ERGCFAVLGYNQYRRMHVLNLQRSNGFSSCMVSGIVQHEMLHILGYHHEQ
TRPDRDSYVKIHWDRIQRDSLNNYFKNIYDNAAVIPPKCQPLSNATTFDD
CYSGFTIDTFGYAYDYGSVMHYGLADFQTSDNNTMDVLRFVPFGIEVGQR
NGMTELDALKVKAKYKCDQLSTLSTTPPTQVTTKGSKNNCLDKYETCSKY
LSFCSDKIMTDNCPRSCKLCPEQGKTITPEKVTTKKPDTSNDLKLF
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mRNA from alignment at LSalAtl2s3528:7829..9665-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006446-702293 ID=EMLSAT00000006446-702293|Name=EMLSAT00000006446|organism=Lepeophtheirus salmonis|type=mRNA|length=1837bp|location=Sequence derived from alignment at LSalAtl2s3528:7829..9665- (Lepeophtheirus salmonis)
ATGTGGTACAAGTACATTGTTTTATTTGTTTTCACAACATTTGAAGGAAC ATATTCTGGTAGATTCATTTTGTGTAAGTCAAAACCTTCATCAAGTAATC AATATCTTTTTTAAATAGAACTGAGCCATGCTCAATGTCGAATCATCCAT GATAAGTATAGCTACAATGGAATTGGATCAAGAAATCTTTTAGGAGGAAA GGTGTGGCCCAACAATACAGTTCCCTATACATTAGCTCAAGGATTCAGTA AGACGGATTTGAGTTTAATTCAATCTGCTATGGATGAAATAGAAAATAAA ACATGTGTGCGATGGGTTCCTAGAAATGGAGAGAAAAATTATGTATACAT TAAGAACAATGAGAGAGGATGTTTTGCTGTCCTTGGTTACAATCAATATA GACGAATGCATGTATTAAATTTGCAAAGAAGCAATGGATTCTCTTCTTGC ATGGTAAGTAGAAAAATTAGAAAATGTTATGTTAGAGAATCTAAAGATTT TTTAAGAACCTAATAATTATTCTTAAAACAAACAACATAGTTATAAATAG CAGGATCTTATTTATTTTAATACTATTCTGGAGCCCCTGGAGTAAAGATC CTATCTGCTCTTATTCATTTTAATTTATAAATCTTATATCGTCGTTACCG CCATACAATAAAAAGTTTTATTTTTCTTTAGGTCTCAGGAATTGTACAAC ATGAAATGCTTCATATACTTGGATATCATCATGAGCAAACACGACCTGAC CGAGACAGTTATGTCAAAATACATTGGGATAGGATTCAGAGAGATTCTTT AAATAATTATTTTAAAAACATTTATGATAATGCCGCTGTCATACCACCCA AATGCCAACCCTTGTCAAATGCAACAACCTTTGATGATTGTTATTCAGGT TTTACTATAGACACTTTTGGGTATGCTTACGATTATGGATCTGTGATGCA TTATGGATTGGCTGAGTGAGTAGCTAAATAATACATCAATTCCTCTTATG TTTATATAATTTCAAAATAGTTTTCAAACGTCAGATAATAATACAATGGA TGTACTCAGATTTGTACCATTTGGAATTGAAGTTGGTCAAAGAAATGGAA TGACAGAATTGGATGCATTAAAAGTTAAAGCAAAATATAAATGCGATCAA CTATCAACTCTTTCTACTACTCCCCCGACACAGGTTACAACAAAAGGTTC AAAGAATAGTACGTATAAAAATATAAGAATGATAGGGATAGGCTTTATAT ATTTTTTTGGAACCGGATAATTACAGATAATTTAAGTTGGGAGTCGATTT TGTCCTTAATTTAACTTCGAGTCCAACAAGGGTTTAAACTTATAATTATT CAGCGTTACTCTACATAACACATAAACAAATACATTGGTGCTTGCACTTT ATGGCTTATAGTACATAAATTTAACATCTAATGGTAACTTTCTTGTTTCA GATTGTGAAGATAAATGGCCATATTGTGACTCNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACA TTAATACCACAACAACAACAACTTCTACCAAAGATATTACAACCACTTCA GGCAATCATTTGTTTAACATTTAACAATAAGATCAAAAATGTTAATTGTC TTATATTTCAGATTGCTTGGACAAGTACGAAACTTGCAGTAAATATTTAT CTTTTTGTTCAGATAAGATTATGACTGACAATTGTCCAAGATCATGTAAG TTGTGCCCTGAACAAGGAAAAACCATAACACCAGAAAAAGTAACAACTAA AAAGCCTGATACAAGTAATGACCTTAAACTTTTTTGA
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