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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s354 | supercontig | LSalAtl2s354:102276..108440 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000006474 >EMLSAP00000006474 ID=EMLSAP00000006474|Name=EMLSAP00000006474|organism=Lepeophtheirus salmonis|type=polypeptide|length=359bp
MTAPKAVKEPKSLLPEEEEEIFILDSQLTRIFMKTKTTTRQSESDHTPQS
QPTKDEESTSAVYCIPYYFKKKPLATLFVVVLINWLISMVSAAIFIELEG
PAQTARLRSTQELETEVISLRNNFSQDFKLDYFMIYSSKLKTLSIQKNNK
EIIWDMLSSCAFITSVSSTTGYGDIIPLTLGGKIFTIIYALYGIPIFIWY
IVKLGVLFRVLVMRLIFWGVKIFEVGCFNWRKKNRLTNVLQSASEEEKME
SNTLYKELTAXKRFHPCVIGVILLLFMVSVSGFISYMEDITYFDAFYACF
ITYSTIGFGDIDIYRISLRSNWFNLMIYGNCVHVVGYMIVSAWISSILDR
CGISTRKCM back to topmRNA from alignment at LSalAtl2s354:102276..108440+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000006474-702321 ID=EMLSAT00000006474-702321|Name=EMLSAT00000006474|organism=Lepeophtheirus salmonis|type=mRNA|length=6165bp|location=Sequence derived from alignment at LSalAtl2s354:102276..108440+ (Lepeophtheirus salmonis)
TTTTAATATGAACGAGTCATGACAGCTCCAAAAGCAGTAAAAGAACCAAA
GTCATTATTACCCGAAGAAGAAGAGGAAATTTTCATACTTGATTCGCAAT
TAACAAGGATTTTTATGAAGACAAAAACAACGACAAGACAGTCAGAAAGT
GACCACACCCCTCAATCACAGCCAACCAAGGATGAAGAATCCACATCTGC
CGTTTATTGTATACCTTATTACTTCAAAAAGAAGCCTCTGGCCACTCTGT
TTGTAGTTGTTCTCATAAATTGGCTCATCTCAATGGTATCTGCTGCCATT
TTTATTGAATTAGAAGGGCCGGCACAAACTGCAAGGCTTCGAAGCACACA
AGAGCTGGAGACGGAAGTCATAAGTCTCAGAAATAATTTCTCACAAGATT
TTAAATTAGATTATTTTATGATTTATTCCTCAAAATTGAAGACTCTCTCA
ATTCAAAAGAACAACAAAGAAATTATTTGGGATATGCTTTCCTCATGTGC
CTTTATAACATCCGTTTCTTCAACAACTGGCTATGGAGACATAATACCTC
TTACTCTTGGAGGAAAAATCTTCACTATTATCTATGCTCTCTACGGCATA
CCCATATTTATATGGTATATCGTTAAGCTTGGAGTCCTTTTTCGTGTTCT
AGTCATGAGACTCATCTTTTGGGGAGTCAAAATCTTTGAGTAAGTCCATG
TCATACTTAGTTTTCTTGGATAGACCTCTGATTATAAAATCTTATCTCTC
TTCAGGGTAGGCTGTTTCAATTGGAGGAAAAAAAATCGATTGACAAATGT
ACTTCAATCTGCTTCCGAAGAGGAAAAAGTAATATAAAATATCTTATAAT
TAACTATATTAGTTGAATTTTTGCCGATCATCCTTCACAAAAATGATAGT
CTTTTTTGTTTTGTATTGCGAATTAATATAAGAAAAGATCAATCATCACA
TCGCTATGAGAGGCTCATCTATAGTGATATTAATCCTGTGATTTTTTTAA
CGGGCCCCTTTTTCGGAATTGGTAATCTGAAGAATGAATTTTCTTTTGCT
CAGCTGTTGTGATTATTATTTAATTCCTGAGTAGTGAAATTCCTTTTCTA
CTACATTCAATTCCATTCAAAACCTAATTGAACATTCGTGTATGCTCATA
AAAGACAGATAGTAACCTTGAGGGTTTGTTCCAGAGTTATAAAGGTAAGT
CCATGTTGGACTAAAAGTAGAATGAGGATCGACGTCGGATTATTTCTTAC
CAATGTCCTTKTTTWTTTCCYTCCCCCCCCCCCTCCCCCGCCTCCTACCT
TGCCACAGCTGATTGTAGCTGATCTCCTCCATAACATTCTTTAAATTGTC
AGGCTAACCATGTATGTTTTCATTTTTTTGACATGACTATTATTCACACA
ATTTTCATCATTACTCATCTATCTATATTAATAAAGCAAAGTTTGCATGC
TTTATCTATTTATATGAAAAACAGTAATGGATARTGCCCCTGATGTATAT
CGAACATATTTTGATATAATAAATAACAATGTAGTCGTATTATTGATATA
TTGCAGGCGTATGCATAAAGCATAGAACGTGTAACAGGGTGCACTGAATA
CAGTGACCCTTGATGTTTAAAATATACATATTTTTGATCCAACAAATAAC
TATGTAGTCCTATTGATGAAATATTGCAAGTGTGGGCATATAGCATCAAA
TAGCAGTACTGTTTCTGTTTGTTTTTATTATTTTTCTCTTATGTATATCA
TAAGATTTAAATAAAATATAAACGATGACATGTAAAAAAGAATTAACTCT
CTCAGGGGCTTTGTATTTAGCATAAAGTGAACACTCGTTTATTTATCTTT
GTAAATGAACGTTCTAGAGACTAAATCCCTCATTAGTCATCCCAGCATAT
ATTTTTTTTCCTCCAACCTTTATTATTATTTTTCCTCTTTTGAGGACAGA
ACACACATGCATTGATTTATGTAATGTTGTTTCAGTCTTTATTTAGGACT
CAAGACTGCATTCCCGGGCAGTTCAGTCCTGCATATCAGAATTATAAATA
AAGATATCTACTACTCCTACTCTCCTTTTCATTTCCTTTCTTTTTCAATA
TGTGACGCTGAGATTTAGATATACACGCTTGTTGCTGTATTATTATTTCT
TACATCACACAGTTCTAAGTTATTATTCTTAAACTCGAAAATGAGTTCTC
CGTACATAGACATACAAACTTTGCTTTATAATATAGATAATAGATAAACC
CCTGGATTTTACCTTATTAATATTTAAGTATATATAGAGAAATTTGAACA
TACTTTTAGATGGAATCCAATACATTATACAAGGAACTCACGGCGGRTAA
AAGGTTTCATCCCTGCGTCATTGGCGTGATTCTTCTGCTTTTCATGGTAT
CAGTATCTGGTTTTATATCATATATGGAAGATATAACGTATTTTGATGCC
TTCTATGCTTGCTTCATCACATATTCTACCATCGGATTCGGAGATATTGA
TATTTACGTAAGATTAATTCAATTACTAATTAGGATCACTAATAGGTAGA
TTAATTATCCCTAGTTTCTAAACAATTGAAATGAGACATCAATTTAAAGA
TTTCTTTAAAAATTAATTTGTAATATAAACTCAAGTAAAATAGATATGTA
ATAGCTTTAAGGTAATACTTTATCTTGTGAATTGTTGTTAATTCTTAAGA
GTAGATGCCCCACCAATGTGAATTGGAAGAAAAAAAAAATTCAAAATATA
TTTCCGATACTGTGGATACGTATTATCTTTTGTGRAAATCAAAAATGATM
CAGCCAATACTCAATAGTGTTGAGTAGTATTGAATCGGCCTAAAAAACTA
AAAAGACTGAAGTCCTATCAGTCCGGTCCTGATTAATTTTGTCAGTCCTC
AGATCTGTCCTTATCGATATTTTATGGTAACTACAACATCTTAAATTACC
TAGTTGCTAATTATGTCATTTCAGCTGTTAAATTTTTCTCATAACCTTTT
TCAAAGAGACGAAATGTCTGAAGTTGAAAATAGAAGGTATGTGGCTAGAA
NGTAAAATACTCAAGTATTATTACAGTTCTAGTTATCATTATTTTTTTTC
ATCGTTTTTATTTTCTTCAATCCTAGCTATGAATTAAGAAAATAAAAAGA
TAGCTAGGACCTTAGGACTTATGGACCAACTTTTATCGATCCTTTGAACT
GATGAATGGTGAGAAATACTGAACCGAATAAAAAGGGGGAGAAAAAAAAA
GACTGATTAAGAATCCAGTCCTAGGACCGATACAAAACTATTGTTGATAC
TCGGTCCGAGACCGAATTATTTAGAATTATAACAGTTTTAGACCAGTTTA
GATTTCTCAGACCGAAACTAAAACACAAATAATTCCCAGCAAAGACATTT
CCTTTTTTTCTCAGACATGACGTTATTGGCTGKAGTATGGGRAGAGGKCA
TCTTTWATGAACTTATGATGTTTTAGACAGTCTGGRTGGAGATACCAATG
GKGCAGAAAAGATTGTACATGCGTTGCCTTTTTTGTTGTTGTTCCGACAT
ATTTACACTCAGAGACATGAGCAAAAACAAAACTTGGTTATTTTTGTTTC
AACTCTCGTTTAGTTGCGTAATGAAACCTTGTAATTAAAAATAATGGGAT
ACAATCGTAATTAAATGTTACTGCAAGTTTTTGGTCCCCACTATGTATAT
TCAAAAAAATATTTCGATATTTCTGTATGTATCTTTTTATTAATCAAAGA
ACTCATATTTCGGAAACCTCATAGATTTTATCCTTTTTGATGAGTTTGTT
ATAAAAGTTAGAACATTCAAATCTTATTTTTTTAAAGGCCCAATTCATAT
TTTTAAAGTTATTTAAGATTTGTTGCTTGAATATTATTTTTTTTAAATAA
ACAAGGATGAAATGGAACTAAAAAAAAAAATACATATATTTGTCGTCATA
ACTAAACATAACTACTACGTCCACTAAATAAANATTTTCCTGGGATATAG
TTTTTTTTTTTCAAATTCCTTCCAAGAAATTACTCTTAAATAAAACTACT
AACTATATTATAAAATTTCAGATGGTATAGATGGGCCACTTCTAATACAA
ATTTTAAGGAATTTGAAGTATAAGTCTAATCAGGCTGAACTTTTCAATAC
TATAATTAATTTAACTCTCTCCTTGAAATTCGATGGGAACTTATATTATC
CGTTTTTTCAAGCCCAGATGATCTTTTTAACACTCTGTGACAATACAAAG
GTTTGGCATCACCACAAATATTAAAATATAAAGTTTAGCAAATGTTAAGG
GTGAAACAGTTCTTAAAAATAATACATTGACTTATCGATTCATAGTACCC
TCAAGACATCGGCTTTTTGGAATGTATTTTCTAAAAAGGAGGGTGTGGGC
CAATAGCTCCTACGGTTTTTGGCACCACTGACTCGAGGAAGTAAGTATAT
TAAAACATAGAAAAGAAGATAATATTATGACGACTAATGTATGGCATGCA
GAAAAAATATTTCCTCAGGTTTCTGTGCTTCTCTTGTATAATGCATGATT
CTGAATAGGGTTGAAGAAATGGACTGCATATGAATGCTAATGATTTTTTG
CAACTGACGTAGCTCTGGCATTTCGTGATTCCTTCCCAATACTTTGAAAC
CTACGTATTATTTATATATAATTAATTAAGGTTTAAAGAATTGTTATATC
CTAGGCTTGTTTACATTTTGTTTCTAATGTCTCAAAGCTAGAGTACAAAA
GTAAAAATTCAAAATAAATATATGACTAAGAAGAAGTATTATTCCCTTTA
TTATTCTCGAAGGCAAAACGTCGTAAGGCAAAACAGTACAAGGGGAACCG
TCTCAAGGCGAAAACGTAAAAATGTTCAAGGCGATTCCTCCTAGAACCCT
TTGATATACGGTATATCTGCTGACAGATATCGCTATAAAAGCTCGTTGCG
CGCTAATAGATTTGAATTTCCAAAGGAAGGAGAAATTATAAATGAATAAA
GAAAAGTTTGTCTCAGGAGGACTAATTTCTTACAACGAGCCTCTGTATTT
AAAGCCCAGCACAAAAAATAAAATAAAAGGAGCGTATATAATAATAAAAT
AATGAATGTGACTTACAATTAGCAGCGAGAGTGTGTTGCTGAAGCTCAGC
GGGTCACATTAAAACTACTCATTGAGACACTTCAGCTACTATGATAATTG
GCGTTAATTATTAATAATGCTGGAATAGCTCTATAATTTATGTTCAGGAG
TCTTTCCTAATAAATATAAATGTAAGGGAAGACAACTATACAGAAATTTG
CAAATATAATCATAATGGCGGMAAAATATAKTACAATGGAGMGAATTTAA
GAAACGCTTAAACTTAACAAGATACGAAATTTCCCTCTCTAAAAAAATAA
AAGACCCGAAATTCCCCTAAAACATGTATTTTTAAAGAGGCACCAGCTTT
TGTAAATCTGCAGTGTAGAGGTGGTATAATTTACAACATGGCCTCCCATG
TGAAAGTCGAGAAAACTCCACCACTAATAGAAATCGATTATATCAAGTTA
AAACATACAGTTCCGTATATAAATATAATTGTTATAATTATTGCCAATCC
ATCAAATGAATTATTTATATTTCTAGAGAATTTCGCTGAGATCGAATTGG
TTCAATTTAATGATATATGGAAACTGCGTTCATGTTGTCGGTTATATGAT
AGTATCAGCTTGGATCTCATCAATATTGGATCGATGTGGGATTTCTACAA
GGAAATGCATGTAATCTACTCCATAAATAGTATAAGGAACTTCAAAAAAA
TTGGATTATTTCGACAATCATTAGAGTGTGATAATTCAATCTGTAGAATA
ACATCTTGTATTTTATAATTAAGGTCAAGTCTTATAGAATGTACACTAAC
ATCTTCCCCCTCCCCCCGAAAAAAAAGTTGCATTCATATTATATATAATA
TGCATTTACATGCATGTCAATAGTATTCTTTTAGAGCAAATTAGAAATTG
TTAAAGTGATAATACGGAAATGAGTAGTAATATTGCATCACAATTTACAT
TCGCAATGACATTAAAACAATTCATTTAAGTAAGACTATCAATTAGTTTC
TAGAAAATAAAATCAATAAATGAAATGAAATTATGTGTTAATGTTTACAA
TAAATACTAAATAAA back to top
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