EMLSAT00000006569, EMLSAT00000006569-702416 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006569
Unique NameEMLSAT00000006569-702416
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s35supercontigLSalAtl2s35:845590..849230 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006569 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006569EMLSAG00000006569-689335Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000028753EMLSAE00000028753-737681Lepeophtheirus salmonisexon
EMLSAE00000028754EMLSAE00000028754-737682Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779904auto779904Lepeophtheirus salmonispolypeptide
EMLSAP00000006569EMLSAP00000006569Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006569

>EMLSAP00000006569 ID=EMLSAP00000006569|Name=EMLSAP00000006569|organism=Lepeophtheirus salmonis|type=polypeptide|length=106bp
MISSIALDISRVEFIGTEIQNLFARWGISHRVSSPHFCQSIRLAESAVKS
IKARLLKAGNTDSEAFQEGLFELKNTPLRQGSLIPVQIVFGIIMRSRLPC
PQPITC
back to top

mRNA from alignment at LSalAtl2s35:845590..849230+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006569-702416 ID=EMLSAT00000006569-702416|Name=EMLSAT00000006569|organism=Lepeophtheirus salmonis|type=mRNA|length=3641bp|location=Sequence derived from alignment at LSalAtl2s35:845590..849230+ (Lepeophtheirus salmonis)
ATGATATCTTCGATTGCTCTAGATGTAATTCCCATATCAAAAAGTAATCT
TTGATCCACTCTTGCTTGTATCTTTGGCTCTATTGGATACAAYTTTCCAT
TGGGATCAAATGTACGAACCAAYTAGCCAGCTATGGCTCTGCTTTCATTC
ATGATGAAATCGTCATGTTGTAGAACGGGGATATTGTGCTGAGGATTTAA
CTAACAAATGAAATATTAAACTATGTATGAAAGGGAATTTAATTTTTAAA
GAACATTTTTTTACCAATACTATTTCATGACTTTATTTACGTTTAAGAAT
ATACAATACTCACAATTGTAGGTTTTCAAATGCCCATTCTTTTTTATTGA
TTTATATATTTTTTGAATTGGTTAATTAATGACTAGACAAGTCAACAAAT
CCTTTTCCTTGGATTAGATGATGTGTTGTTTTTTATAGCAACAAATTTTA
AATAACTTACAAAATATGGATTTTTTTAAAAGTGCTCTTGTTTATTATGA
AGTTGTAAGTCTTCATCAACAATTTATGATTTTTTTCCTAGCGATCAAAA
ATGTCCCAAAGAAAAGGTCCTTTTTTTGTACTTAAAAAGTATTTTCTCAA
TTAAAAAGTTTAAAAAAAATTACACAGTGGGATACACATTTTATACAATG
AATTCAAGCCAGAAAAGTAATTTATGTTTGAGCTCAGAATTCAAAACTTA
TTTAATTTTTTTCTCAGTCATCTGAAATATCTGTGATTATAGRAATTCGG
GACTATTAACGTTCAAAGTTATTTTTTTACAATTAAAATTATCCCCAAAT
TAAAAATAAAATTTATAAAACTTATGTAAAAGTATTTTTTACGATTAATA
AGTGTTTTTATTGATTCTGTATCTCGTTCTGATCTTGATATATATGTATT
TCTATTTTTAGACCCTTATAACTTATTCATAATACATAGTGATGAGGATA
GTTATAATTTATATTTTAGGAAAATATGAAATATATTATTTAATAAATTT
AAAATTATTTATAAAAAAAAATATGCATATCCAAGGATTTTTGTTCCATT
TGATGATTTGTAAGGGATCCCATTTTGAAATATTAAAATTATCTAGTCAT
CGAGAATGGGTAGTTTTTTTGTTTCGATCCTAGTATCTCATTCCCAATGC
TGGAGTCCCCTTTACTCTCTTATGAGGAAAATTGCCAAAACACACTGTTA
TACAAAAAAAAGGATACATTTTGGGTTATTAAGGTCACTTTTATGGTTCT
TGAGGTAAACGTAATCAGGAACACATCATATATTATATAGTTAAAATCCT
GTGTTTTTGCTTGATTTAAGAAATTACTTTACAATTATAATTAACATTTG
AATGTTCTACCTTACCTTCAAAAAATCATCAGCTAATTGCTCACTTTTAT
CTATGTTAACCTCCACAAACTCATAGTCCAGGCCCAAAACCTCAGCAGTT
AATAAGACTAAACGAACTGGGGGTGAAGCTGTCATTCCATAGATTTTGAG
AGGCATATCTATGATTTTTGTGTCTACGTTTGACAAATATATGTAGAAAT
ATACTTTGTTAGAATCTCTTTAGTATATTTATTCACTCATGTAACGTTTT
CTTACAAATGAAAATATACATTTATATTTTCTAATCTCAAAACATATACA
TTTATAATACTTCATTTCAATTGATTAAATTACAATAAAAGACGAGGTAA
TATTAAGTACCATAGATATCATGTAAATAAAGACATGTACATTAAGATCT
TCCCTGACATATAACATGAATCCTGACTGTAAAATAAAAACAATCAAAAG
AAAATATATCTAATAATATTATTTATTCATTCTAAAAAAAACCCCAACAT
CATCACTTTATATAGAGTAAGCTGGACTAAGGAAAGTGGAAACACGTTTC
AAAGAATGACTTTGAGATACTTACAATTACAGAAACCAAAGTTTTACACA
ACAAACATWCYTATAARTWCGWATAATCAAACGATCTAAAATTTATTTAT
GATATGTATTTTTTGTGTAATCTTAATTGGCATGTAAATTTCTCGGTCCA
CTCTACAATTAAGTCACCAAATTGACTTTAAGCTCTCGTTGGTACCTTTT
TGTCATTGTCTTAGAGATTTCCCCCATATTTGAGTACCTGATATTAAATA
TKTATATATATATATATATATATATANTTTTTGAAAAATTACTTTTGATT
TTATAGGACACCTTAACATGCTTCTTTTTGAAAAAAAATCGTTATAAAAA
CCCATATAGATTCATATTGAGGAAAAAACCATGTCAAAAATGAAAAATAA
ATTAATCAGGGGCGTATGCAAGGCGTGGGGGCAAATTTAGGCAGGGGCTG
MAGCCCCTGCCCTAATTTAATTATTCAATTTTTTCCCCAGATAATCAATT
TTTCATGAATAGCTATGGATTTTTGAAATTTTTTTCCTAAAAATTTAATA
TTTGAAATTAAAAAAAATGAAATAATAATATTGATAATTTGATTTTTGAA
ATTATTTTCCAAAAAATTAAATTTTTGTGAAGAGCTGTGGATTTTTGAAC
TTTTTTAAAAAAATATCTACATTTTTTGTGAACAGCTATGGATTTTTTGA
AATTTCTTAGAAAATATTTCCAAAAACCAACGCCCCTCAAAATATAATCC
TGTGGACACCCCTGTTATTAGATAAAGGAAACACTTTTATTCAATTTTAG
TTAAGTATAGGATTTATCCCTATTAAAATTTTTGATAATTCATATACGGG
GCCAACTTTTGTTATTTACTCATCTCTTATTATGCAAATTTTGAGAGGTT
AAGAGTCATTTTTTTTACAATTTTTCAATAAGTAATGTTGTAGAACACAT
AATTAACTGTTGATTTCTAAGAAAACATTGTCTTAGTCGCCAGAATGAGT
ATACAGTACGATAAATGGATTAAGATCGCAGGGCTTCTCAGCCCAGGATT
GTCCCAAAAGACCATATGAAAGCAAACTGGGGCCTCGAGGAAGAAGATTT
ACTCCATACGTTTGAAGGTCGGAGAGGGCCTTAAAAACTATCTATCAGGT
ATTAAATCCTCAGTGTTCGTCAACCGCCTGAAGTCGACCTTCAAGTAAAA
GGGTAATTCCTCAATTACTGACATGACAAGAAACAAGTCCCTATTAGCGC
TGTCTAGGAAGAACGACTCTGCAATGTATTCCACGGCCTCTGTTGACAAA
ATAGCAGACAAGTACTATTTGGTAATAGTAGATCAATACTCGAACTTTTT
TCTGGTCCACAAATTTTTGTCAGCACGTTTAAGTCCCTTATCAGTAGCCT
CCTCCACATCGCCACTTTTGGTAGACCATTAAGAATATTTTCAGATCAGT
AGAGTTGAATTCATAGGAACAGAAATACAAAATTTATTCGCTCGCTGGGG
TATCTCACATAGAGTATCATCCCCACACTTCTGTCAATCCATAAGACTAG
CAGAATCCGCTGTAAAGTCAATTAAAGCTCGGCTACTTAAAGCTGGGAAC
ACAGATTCTGAAGCCTTTCAGGAGGGGCTATTCGAATTGAAAAACACACC
GCTTCGACAGGGCTCACTTATACCAGTCCAAATCGTCTTTGGAATAATAA
TGCGATCAAGACTCCCTTGCCCACAACCTATCACTTGCTGA
back to top
Add to Basket