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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s389 | supercontig | LSalAtl2s389:253447..258113 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000006873 >EMLSAP00000006873 ID=EMLSAP00000006873|Name=EMLSAP00000006873|organism=Lepeophtheirus salmonis|type=polypeptide|length=916bp
MSFLSSAFNSIRTFYGEINSATLTGAIDVVVVEQKDGSYLSSPFHVRFGK
LGVLKAREKIVSIEINGESVDIQMKLDDAGTAFFVEQLREEECPDXLATS
PIPNSEMMIEQLPKIEEKPPPPQKSKKKRKTRQKHSRSGSKTSLREINLD
IFEMDDVDGDVDESDEETTTAGAGGTLTQTLDKELEELVREMPSSRASLT
SINLAEIDKSFLGSRIPRSISENEKFEADLKKDGTEVKSVLNESSSVKAD
YHYFSEPDELEKIKPSVSKTPKRSRSPGGILSDSEYETTKNKPEDDTSAS
WRWGELPSTSTSTPVTSTSESKPLEKIQESSKEEEVNATNKDSDAKKWSI
FNYLRSSRKDGANSSEGGVYLDDINDEEMLAMYVGASRKYEDAESGNGPS
LPMSPRLVERRHNEDSFIGPNISFSLCGYAEGVFSPASYEQSIISFDDFM
LKLQNNDPVFEDPNLVVKIHNNYYSWKNALPAVMSWLLYKRPLPAELMPK
SIVIPQEEQPINSSADTVPTVVEEIPKLNELENTPDIKEIQSVIEDTTKP
HEDQLSSSSPPPPPPPERTESESRQKKSWWPWYNRDSKITHDSTETAKTL
ETLAEVSEKLNSEVKKRSLKAVSGNSSDSSGASWNEKINAVPSSHGAFIK
GKERFRKTLRLSSDXVXRLNXRDGSNEAEFTVTTPYQGTSYCKCHIYLWK
YTDKVVISDIDGTITKSDVLGHIFPIIGRDWAQSGVAQLFSKIRRNGYHM
IYLSARAIGQASITKEYLQSIKQGDLCLPDGPLFLNPTSLISAFHREVIE
KKPEEFKISCLRDILKLYEDAKNPFYAGYGNRINDAYAYRAVGIPVSRIF
TINYKGELKHELTRTFQTSYCSQSSIVDHLFPPRTDEFDSPTSGQEFCSF
AYWRDPIGEFELPTST back to topmRNA from alignment at LSalAtl2s389:253447..258113+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000006873-702720 ID=EMLSAT00000006873-702720|Name=EMLSAT00000006873|organism=Lepeophtheirus salmonis|type=mRNA|length=4667bp|location=Sequence derived from alignment at LSalAtl2s389:253447..258113+ (Lepeophtheirus salmonis)
ATCTATGTAGAGTAGCTAAAACTAGATGGAGTACGTACATGTGTAGTACT
GTTTTCATCATAGTGGTGAAATGAAGCAGTGAAAGAGAGAGAGAGCGCGG
ATATAACAACGCACGCTTAAATTTCGCAGGATCTCATACTGAATTCCCAT
GATATTAATTTAGTTTTTGTCAGATATTAGAAATGTTAATAGTGAAGTAC
GACGTGCTGTGATACAAGATTTAATCACGGAGCAGAGAAAAGTTAATAGA
TACATATGTACTTTGTTTGTAACAATAGTATTTTAAGCTAAGAGTTCCTC
CTTCCTTTGTCCATTTTGTGTTCTCTGGCCAGCTCTCACTCTCTGTTTCT
CCTTTTACCTCCCTCTCTTTTTCCTTCTCTTTTCTTAGGAAAATTACAAA
CCATTTATCACCCAACCTCATACTTTTCTCCTTCTCAGAGAATATTTCCA
CTTATTTTACAACTTGTACGTTTACCCACTTCTTGGCATCCTCCCTCTTT
TCCTCGTTTCCTCTCTTCCTTAGCCCATTAAAAGAAAGGAGCCTCATTTC
AGTCTTGTGGGAGCTTTCTTCCCATAAGGAAACGAAGGGGCGTCAAGGAT
GAGTTTCTTGTCTTCCGCTTTCAACTCAATTCGCACCTTCTATGGAGAGA
TTAATAGCGCCACACTCACGGGAGCCATCGATGTGGTTGTCGTGGAGCAA
AAGGATGGAAGCTACCTCTCTTCTCCATTCCACGTCCGCTTCGGGAAATT
GGGCGTTCTCAAAGCCAGGGAGAAAATTGTAAGTGTTTTTTCTGAATCTG
AATTGGATTCCGTTCTTTGAGATATTTTTTTTGTTTTCCTTGTAGGTGAG
CATTGAAATCAATGGAGAATCCGTTGATATTCAAATGAAGCTGGATGACG
CAGGCACTGCTTTCTTCGTTGAGCAACTGCGAGAGGAGGAGTGCCCCGAC
TKCCTCGCCACCTCCCCCATCCCCAACTCTGAAATGATGATAGAGCAGCT
ACCCAAAATAGAGGAGAAACCTCCGCCACCTCAAAAGTCCAAAAAGAAAA
GGAAAACACGACAAAAACATTCCAGGAGTGGTTCCAAAACATCTCTGAGG
GAAATTAATTTAGATATTTTTGAAATGGATGATGTTGATGGAGATGTTGA
TGAAAGTGATGAGGAAACAACAACAGCAGGAGCTGGAGGAACTCTTACTC
AGACTTTAGATAAAGAATTAGAAGAGCTAGTGCGGGAAATGCCCTCTTCC
CGTGCCTCCTTAACTTCCATTAACCTAGCCGAGATTGATAAATCCTTTTT
GGGCTCTCGTATTCCTCGTTCCATTTCAGAAAATGAGAAATTTGAAGCTG
ATTTGAAGAAGGATGGAACTGAGGTCAAGTCTGTACTCAATGAATCTTCC
TCCGTAAAAGCTGACTATCATTATTTTAGTGAACCTGATGAACTAGAAAA
AATAAAACCTTCCGTATCTAAAACTCCTAAAAGATCTCGTTCTCCTGGTG
GTATTCTAAGTGATTCCGAATATGAAACAACCAAGAATAAACCTGAGGAC
GATACCTCTGCTTCCTGGCGATGGGGAGAACTTCCCTCTACTTCGACATC
TACCCCTGTTACTAGTACTTCAGAGTCAAAACCTCTTGAAAAGATACAAG
AAAGTTCAAAGGAAGAAGAGGTCAACGCCACTAATAAGGACAGTGACGCT
AAAAAATGGTCTATTTTTAATTATCTACGTTCTAGTCGAAAGGATGGTGC
TAATTCTAGCGAAGGTGGTGTTTACTTGGATGATATTAATGATGAGGAAA
TGTTGGCTATGTATGTTGGGGCTTCACGTAAATATGAAGACGCCGAATCC
GGAAATGGCCCTTCGTTGCCCATGAGTCCACGTCTTGTTGAAAGAAGACA
TAATGAGGATTCATTTATTGGGCCAAATATATCATTTAGTCTATGTGGCT
ATGCTGAAGGAGTATTTTCACCGGCCTCATATGAACAGTCAATTATATCC
TTTGATGACTTTATGTTAAAGTTGCAAAACAATGATCCAGTGTTTGAGGA
TCCAAATTTAGTTGTAAAAATTCATAATAACTATTACTCTTGGAAAAATG
CACTTCCTGCTGTGATGTCCTGGTTACTCTATAAAAGACCTCTACCCGCT
GAATTGATGCCTAAAAGTATTGTTATCCCTCAGGAGGAACAACCAATAAA
TTCTTCTGCAGATACTGTTCCTACTGTAGTAGAAGAAATTCCTAAGCTCA
ATGAATTGGAAAATACCCCAGATATCAAAGAGATTCAGTCAGTTATCGAG
GACACTACTAAACCTCATGAAGATCAATTGTCGTCCTCATCTCCACCACC
ACCTCCTCCTCCTGAGAGAACGGAATCAGAGTCTAGACAAAAAAAGTCCT
GGTGGCCCTGGTATAACAGGGACTCTAAAATTACACACGATTCAACAGAG
ACTGCTAAGACACTTGAAACCCTTGCAGAAGTGAGTGAAAAACTTAATTC
AGAAGTTAAAAAACGATCCCTCAAAGCTGTGTCTGGGAATTCTAGCGACT
CATCAGGAGCATCATGGAATGAAAAAATTAATGCCGTTCCTTCTTCTCAT
GGAGCCTTTATCAAAGGAAAGGAGAGGTTTAGGAAGACTCTTCGATTGTC
GTCTGATGAKGTTAWACGGTTAAATCWTCGTGATGGAAGTAACGAAGCAG
AATTTACTGTTACAACACCCTATCAAGGAACTTCTTATTGTAAGTGTCAC
ATATATTTGTGGAAGTACACAGACAAAGTCGTTATCTCTGATATTGATGG
AACAATAACAAAGTCGGATGTCTTGGGTCATATATTTCCAATTATCGGTA
AGAGCTGTATAATTCACTCTGATATGGATATGAAAATGTANNCTTTGATA
TTTTATAGGTCGTGACTGGGCCCAATCTGGTGTAGCTCAATTATTTAGTA
AGATTAGACGCAATGGATATCACATGATATATTTGTCTGCCCGAGCTATA
GGTCAAGCTTCTATTACCAAAGAGTATCTCCAGTCTATAAAACAAGGGGA
TTTATGTCTTCCGGACGGCCCGTTATTTCTTAATCCAACGTCTCTTATAT
CTGCATTTCATCGTGAAGTGATTGAGAAAAAACCCGAAGAGTTCAAAATT
TCATGTTTAAGGGATATTCTAAAATTATATGAGGATGCTAAAAATCCTTT
CTATGCCGGTTATGGAAATAGAATCAATGTAAGGATCGTTGTTATTTGAT
TATTATGAACTTATGATTGTTTTACTACTACTATCTCTTTGTTTCTTCTT
ATTTAGGACGCATACGCCTATAGAGCAGTCGGAATCCCTGTGTCTCGTAT
TTTCACTATCAACTATAAGGGTGAATTAAAGCACGAATTAACTCGAACCT
TTCAAACCTCGTATGTACTTCATCCCCTCAATTACATAGTTATAGAGCAA
GTTGACTTATTACTTTTTTTTCAGATACTGTAGCCAAAGCTCAATAGTCG
ATCACTTATTCCCTCCAAGGACTGATGAGTTTGATAGTCCAACGTCAGGA
CAAGAGTTCTGTTCTTTCGCTTACTGGAGGGACCCAATTGGTGAATTCGA
GTTACCTACATCAACTTAAGATATAAATAAAAAGAAAGACATAATAATTA
CTACCCTTTTTCCCCTCAAAAAGAGTGGCTCAAAAGGCTATTATAATGCA
AGAAATATTATTTATTGTATATTTTTGAATATCATATTCTTGATGAAAGA
GCGCAAGGATCACTTGGACAATGCTCAAAAATTATTCCTATGAAGAAATA
TGTACCAAAAAGAAAAGAACAGAAAAATGTATTCAAATTTAATTTATTTT
ATTCTCTTCTTCCTTCCACTCTTGCCATATTGCTTTTGCATTTCCTATGA
TTATTTTCTAATTTAAAGTTAGTTTTTCTATTTTTGTTTCACAGTTATAT
CTTGATTCTCGATACATATTACTTAGTACCTTTAGTCAGTCATTTATACC
CCCCCCCCCCACCCCCACCAACACGTTAATAATACCCACCCTCATGAATG
AAACGAATAATAATAAATGGAAATAGCTTATTACTCGTTTTCTATATTGA
TTCATTATCTTCCCCATTGTTTTTTGTTCCGAATTATGGTGTACGTATAG
ATTAATGAAAGAAAGAAATGTTGCCCAAATAAATCTTTATTTAGAAATAA
TTATTCGGAAGTCTCAATATTTATTATTTCAATCAACGAAATGTAATAAT
AAAAAAACAATAATGCACCTTCCTTCAAGGATCTAAGAGACATGAATCCA
AAGTATGTCTTGAGAATCAAGAAGAAGAGTGTGTGTAATAACAAGAAGGG
ACGCAAATAAATATTAATATAGCAGGATATCATTAAGGATTGTGAATAAT
TAAGGGGGAGGAATCATTGATCAACAATTAATGAATTATACAGAGTAATT
ATATAGTTAGTAATAATAATAATAACACTAGTCAACAAAGTTTCACCTTT
TGATGAAGATGGTGTGTTCCAAATTGTTTTTACCATCTCGGAAAATATGA
AAATGACCTTCATAACCCAACTTTTCTGGAGAATATTTGTATGAAAGATC
AAACTCAAGGAAAAAATTACAAAATATACTTCGTATGAATTATAATTCAT
TTATTTATGTATCGGAG back to top
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