EMLSAT00000006928, EMLSAT00000006928-702775 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006928
Unique NameEMLSAT00000006928-702775
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s393supercontigLSalAtl2s393:107315..110460 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006928 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006928EMLSAG00000006928-689694Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000030446EMLSAE00000030446-739374Lepeophtheirus salmonisexon
EMLSAE00000030447EMLSAE00000030447-739375Lepeophtheirus salmonisexon
EMLSAE00000030448EMLSAE00000030448-739376Lepeophtheirus salmonisexon
EMLSAE00000030449EMLSAE00000030449-739377Lepeophtheirus salmonisexon
EMLSAE00000030450EMLSAE00000030450-739378Lepeophtheirus salmonisexon
EMLSAE00000030451EMLSAE00000030451-739379Lepeophtheirus salmonisexon
EMLSAE00000030452EMLSAE00000030452-739380Lepeophtheirus salmonisexon
EMLSAE00000030453EMLSAE00000030453-739381Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772326auto772326Lepeophtheirus salmonispolypeptide
EMLSAP00000006928EMLSAP00000006928Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006928

>EMLSAP00000006928 ID=EMLSAP00000006928|Name=EMLSAP00000006928|organism=Lepeophtheirus salmonis|type=polypeptide|length=726bp
MTFSQIKGIFTFLLLAICCQMYRGLKIIDTPRDVWTILQNSVELECIVDS
TWQWCYWENLKESQKYPITMNDRSNEDNGNLLLSTSSESCKITIHLDGSE
ERAQKYIGDWKCHLAKTDTDEVSSSYKDEQIITLHLAVPAGIHFSIEYNN
ERKDVYKVIQGEEILPFDSGEVIEKTRILSTNESVCEIKDTDFQNGIFLL
PLVMGNEVILNCDIDSSIAKPEPNLSLWLSSPIEDQLISKVSSSFTYVPK
MEDDRKRFECFSIQKNEFLSFEAIKSYSFPIYVMSIPSILEYPTNTQKLL
KENDLDLIPISLQFYSQPPPQKNSIFWTFNDVIIKPNQTIEVENDLILRT
SDVIPLKKKDSPSVFQIXLFISKGLFXSHSNISIIASIGNRLGKVNWSYD
YNEDFFSSRYVVSWLSMSHFTTYLIIILLVLNLFLIGIWCTCCCCCGSIC
RCCLCPFLRKIPKTPESNRNFYVSVQSNEDLHCSDLSSLPEKDSSNGNDW
SLLNPKTFTYEEEPSRNKVSSPPEEKWIRLKSLSHDDTQILITSTDDSKL
LYIDEISVSSQNDSSKDEVDSFEKKVQSITPPPAYSSELPSQDKKIQSNI
IKYPPPLPGMVENPIYEVPEMIEIEVKDQDTQTTKSFKKSIKIIPEYIPD
HNIYARDRSSSTNVETSPSENKTFTLSKNYTLTGPTSYPVYSPMSISNPE
KIYSDYLGSAQETSWIKKTKDEDDEE
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mRNA from alignment at LSalAtl2s393:107315..110460-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006928-702775 ID=EMLSAT00000006928-702775|Name=EMLSAT00000006928|organism=Lepeophtheirus salmonis|type=mRNA|length=3146bp|location=Sequence derived from alignment at LSalAtl2s393:107315..110460- (Lepeophtheirus salmonis)
ATACAAATCATGACTTTCTCTCAAATTAAGGGAATATTCACATTTTTACT TCTGGCAATATGTTGTCAAATGTATCGAGGATTAAAAATTATAGACACTC CAAGGGATGTATGGACGATTCTACAAAATTCAGTAGAACTAGAATGTATA GTAGACTCCACTTGGCAGTGGTGCTACTGGGAAAATTTAAAAGAATCTCA AAAGTATCCCATTACTATGAACGACAGATCCAATGAGGACAATGGYAATC TACTGCTATCCACCTCATCCGAATCCTGTAAAATAACCATTCACTTGGAT GGCAGTGAAGAGAGAGCACAAAAATATATTGGAGATTGGAAATGTCATTT AGCAAAGACGGATACAGATGAAGTTTCATCATCTTACAAAGATGAACAGA TTATTACACTTCATTTAGCTGTACCTGCGGGAATTCACTTCTCAATTGAA TATAACAATGAAAGGAAAGATGTGTATAAAGTTATTCAAGGTGAGGAAAT ACTCCCATTCGACTCGGGTGAGGTTATAGAAAAGACAAGAATACTCTCTA CAAATGAATCTGTTTGTGAAATAAAAGATACAGATTTCCAAAATGGTATA TTTTTACTACCTCTTGTGATGGGAAATGAAGTGATATTAAACTGTGATAT AGATTCGTCAATTGCTAAGCCAGAACCAAATCTAAGTCTATGGCTATCCT CGCCGATAGAGGATCAATTAATTAGCAAGGTCAGTTCATCTTTCACTTAC GTTCCTAAAATGGAAGATGACAGAAAGCGGTTTGAATGTTTCTCAATTCA AAAAAACGAGTTCTTATCATTTGAAGCTATCAAGAGGTATGTTTAATGAT TAGTTAATAACATATTCCTACTTCATTAGCTCTTTATGTTCCCTTTCAAT AAAACAGCTATAGTTTTCCAATTTATGTGATGAGTATTCCATCAATTTTG GAATATCCAACAAATACTCAAAAATTATTAAAGGAAAATGATTTGGATTT AATTCCCATCAGCCTACAATTTTACTCACAACCTCCTCCTCAAAAGAATT CAATTTTCTGGACCTTCAATGATGTGATTATCAAACCAAATCAAACAATT GAGGTGGAGAATGATTTGATTTTACGAACATCTGATGTAATACCCCTGAA AAAAAAGGATTCTCCATCAGTTTTTCAAATTGWTCTTTTTATTAGTAAAG GGCTGTTTAKTAGCCATAGCAACATCAGTATAATTGCATCTATTGGCAAT AGATTGGGAAAAGTTAATTGGTCGTATGATTACAACGAAGATTTTTTTTC ATCAAGATATGTTGTTAGTTGGCTATCAATGTCACATTTTACAACGTATC TCATTATCATCCTCCTTGTATTAAACTTGTGTAAGTATTGTCAGAAGACT TTTTTCGAACCATCATGTCAATAGAGTAACGTATATATTTTTTTAAATAA CTAAATTACAATTACAATTTTTGTTCAAGTTTTGATTGGAATTTGGTGCA CCTGTTGTTGCTGTTGTGGGAGCATTTGTAGATGCTGCCTTTGCCCATTT TTGCGAAAAATTCCTAAAACCCCCGAATCTAACCGTAACTTTTATGTTAG TGTTCAAAGTAACGAGGACTTACATTGCTCTGGTTTGTAACTTTATGATT TTCAATTAAAGTGCAATTATAATTGTACTTTGTGTTTTAGATCTTTCTTC ATTGCCTGAAAAGGATAGCTCTAACGGTAATGATTGGAGTCTTTTAAATC CTAAGACGTTCACGTACGAAGAAGAGCCTTCACGAAACAAAGTATCTTCT CCTCCTGAAGAAAAATGGATCCGATTGAAATCTCTATCTCATGATGATAC TCAAATTTTAATAACTTCTACTGATGATTCAAAATTATTATATATTGATG AAATATCAGTGTCTAGTCAAAGTAATTTTTAAAAGTCTGTATTACTAGCT CTTACTTATTCATCATTTTAATTTCGTATTTTAGACGATTCATCAAAAGA TGAAGTCGACTCCTTTGAGAAGAAAGTTCAATCCATCACTCCACCTCCAG CTTATTCTTCAGAGCTTCCATCTCAAGAGTAAGCANGAGTAACTGTCAAT TTCTCAATTTATCGATTCAGCTAAGTCAAATTTGAATAATTATTAACTAC GTATACGGATCATTTTAGACTCAATATTTTTTTCTAATCCAACTCTCATT TGGTATAGTTAAGCTGTCAAGTCATCTTATATTTGAATGAAACTATTATA TTTAAACTTTTTATCAAACGTTTATCATCCTGATGATCTAATAATGTATA AATTAAATGTTGAAAACATTCATTAGTGAATTGACAAACTTATATAAAAA AAAAAAATTCTGAATAGTATTTGCATAAATTATCTACTTTTCATTATTGT TTTATGTATTAAAAAGTACTCTAACAGATGTTAGTGACCAATAACAGATT AGCTGATTAACTTGTACTTTTAGATAAAACTATATAATGCCATTATTAAA TAAGTAATTTTTATTAAATTGCATATGTAATTTTCGATCCGGACACGTAG CCATACAAGCAAAATGTCATTCAATCTTAATTACTTATGATACATAAGTA AAAAAATACAGTCAAATATAATCAAATGTAGAGTAACTTGGATTACTATT TGAACCGGTGAAATAACTGAAGAAATTCTGACAACAATAATTATTTATCT ATTTTAAAAATATAGATCCTCCACCTTTGCCAGGCATGGTCGAAAATCCT ATTTATGAAGTCCCGGAGATGATTGAAATTGAAGTCAAAGATCAGGATAC TCAAACAACTAAGTCATTTAAAAAATCAATAAAAATTATACCAGGTACAG AAAAAAAAATGTTAATATGTATATAAAATACTCAGCTGAGCTTTTATTTA GAGTACATTCCGGATCACAATATATATGCAAGGGATAGATCTTCAAGTAC GAATGTTGAGACATCTCCAAGTGAAAATAAAACATTTACTTTGAGTAAAA ATTATACTTTAACCGGACCAACCTCTTATCCTGTATATTCACCAATGAGC ATTTCAAATCCTGAAAAAATATATAGTGACTATTTAGGATCTGCTCAAGA AACAAGTTGGATCAAGAAAACTAAAGACGAGGATGATGAAGAATAA
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