EMLSAT00000007039, EMLSAT00000007039-702886 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007039
Unique NameEMLSAT00000007039-702886
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: -Missing-
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
G F38 g12979_PEP3 female
  1. PreAdult2
No visible phenotype
-Missing-
20.12.2012 - 10:57
29.01.2013 - 10:06
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s39supercontigLSalAtl2s39:55736..62644 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007039 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007039EMLSAG00000007039-689805Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000030898EMLSAE00000030898-739826Lepeophtheirus salmonisexon
EMLSAE00000030899EMLSAE00000030899-739827Lepeophtheirus salmonisexon
EMLSAE00000030900EMLSAE00000030900-739828Lepeophtheirus salmonisexon
EMLSAE00000030901EMLSAE00000030901-739829Lepeophtheirus salmonisexon
EMLSAE00000030902EMLSAE00000030902-739830Lepeophtheirus salmonisexon
EMLSAE00000030903EMLSAE00000030903-739831Lepeophtheirus salmonisexon
EMLSAE00000030904EMLSAE00000030904-739832Lepeophtheirus salmonisexon
EMLSAE00000030905EMLSAE00000030905-739833Lepeophtheirus salmonisexon
EMLSAE00000030906EMLSAE00000030906-739834Lepeophtheirus salmonisexon
EMLSAE00000030907EMLSAE00000030907-739835Lepeophtheirus salmonisexon
EMLSAE00000030908EMLSAE00000030908-739836Lepeophtheirus salmonisexon
EMLSAE00000030909EMLSAE00000030909-739837Lepeophtheirus salmonisexon
EMLSAE00000030910EMLSAE00000030910-739838Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770852auto770852Lepeophtheirus salmonispolypeptide
EMLSAP00000007039EMLSAP00000007039Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007039

>EMLSAP00000007039 ID=EMLSAP00000007039|Name=EMLSAP00000007039|organism=Lepeophtheirus salmonis|type=polypeptide|length=1172bp
MLMNGEAQFPEALTAKPSALIGFLGLSLEQHIIWNTFSEVSSRLRFVNME
NLEFPALKPKRTTYDWYIPKGILKRNWVSKHLNGIPSVVVLFVQLDWKHP
NWSEKILEVASKVKSVRGTLSGRGTKLAVVLIQKEAPLPSAASDEDSERA
SSLCSACELSSRSLFALPISTDSLRGYAVKLENAFYELSQNYYHSEIRGV
KSHRDYLNKTTHLYLFVRHQFKIGFLYELKQEPMSAHKHYGHAYSLLMEV
RATDTNIMEVKTVAGFINYKVCRLAFALNLNRDAIAQFRKHADVFRHKVG
CDRLAFEHSAWQSQQCHVFAQLFEKTISSSSGNNAASQAQHPGVYYQQAA
SHAISRRQQSEEAIQEEPNNFENVNMNLLENADHLEYYGQRPWRPGKATL
EPPDVERENSGIRALIYWEKMNVNDSQIIITLLKKSISIFEMFKSPRMTA
HLTVEVAEELRKEHQYRESLELLKPVIKTYRQEKWSFLLNSVLSLSLKCS
FLICAIPEYASLCLELGSLEIQHVSQEEKNRITGNLIKLLERQCPSAEPG
LTSKSERAAVTEAFPLWTSNLEYNQNTETPLIDLQSISSSSFNIKVTFEN
QEPVTVNSPGKCRLRLVNTGTNFPVPVQGVEISINDWSIDRKFNELVFVG
PCSYLDEMFELKLQQSDIDLGKFSIVSVVVTIGSKFFIKLKKSFVDEVVT
DHFLIPPSSSSNADAILNIMNEPDVTKVVVRQRTPLLQMKVLEKNPILVG
EWFKIKLDFFNEEDSKIEDFECKTILLDSQDPLIGDTTSVSYDPSSQLEI
KXPTDENVEAYAVTKHIGELESSKSLSFNVFLKASTTGIRNVRIRIKYKI
GDEFYYTLKQNLSLNAIEPFVISTEFLSVRQRNISRIYTDEPFLCIPEVR
SLCSGSIRILDCRIEPRFPVEKYSEGEDDSSLKNSILFQKGLARDCFCLL
VKRDNLSNHLDIQDITIGKYIMEWRRDDENDINANVTSVFELSPAKLSLG
SLFIQAFHSPYGVKKSPFNLTYKLSNLTDKVQEYSLNIESSEYFLISGNK
QVHFKIIPHQSRTVNYVLHPVKAGPKVPLPKLNLKSLRLAQGLDVNETLE
RLLPEYMIVLENTHKDGFVKGQIRDECFKKSSSIFIESKISDKSSKSRSF
KKWMKIMKRRTFLVQIEKKDWK
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mRNA from alignment at LSalAtl2s39:55736..62644+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007039-702886 ID=EMLSAT00000007039-702886|Name=EMLSAT00000007039|organism=Lepeophtheirus salmonis|type=mRNA|length=6909bp|location=Sequence derived from alignment at LSalAtl2s39:55736..62644+ (Lepeophtheirus salmonis)
TAAGGTTGACGCTCAAGTCTATTGTCGCAACTCTTATTATAGGGCTCTGG CCCAATTATGGGAGTTGTGACGTCATACTTTACCTCATGACTTAAATTGA GTCTGCTTTAATTCTCTCTCCCTCTTTTTTCGTGCCTCCTTCTCTCTGTA TGTATGTCAGTTAGCTTGTTGTTTTGATGTCATAGATAACCAGAGGACTC GAGTAGAGTGAGCTAACAACTACTAGAGTCACTAGTCTAAGAATGCTTAT GAATGGTGAAGCTCAATTTCCAGAGGCTCTCACTGCCAAACCCTCTGCCC TCATTGGTTTTTTGGGCCTGAGTTTGGAGCAACACATAATATGGAACACT TTTTCGGAGGTGAGTTCACGTCTCCGATTCGTGAATATGGAGAATTTGGA GTTTCCGGCCCTGAAACCTAAACGGACAACCTACGACTGGTACATTCCCA AAGGGATTCTTAAAAGAAATTGGGTGAGCAAGCATTTGAATGGGATCCCG TCTGTTGTTGTACTATTTGTGCAGTTGGATTGGAAACATCCGAATTGGAG CGAAAAGATCCTTGAGGTGGCCTCCAAAGTCAAGTCCGTGAGGTTTGTCT CCCTTTTCCGCTCGTTCTTGTAGCAGAAAACTCTAATGCATTTCTTGTTT TCCTTCCAGAGGGACACTCTCTGGGCGAGGCACGAAACTAGCGGTGGTCT TAATACAAAAAGAAGCTCCCCTCCCCTCTGCAGCCTCCGATGAAGACTCC GAAAGGGCGTCATCCCTATGTTCAGCCTGTGAACTATCTTCTAGATCTCT TTTTGCTCTTCCAATCTCGACAGATTCTCTGCGAGGTTATGCTGTCAAGC TAGAAAACGCCTTTTATGAGCTATCTCAAAATTACTATCATTCGGAAATA CGGGGTGTCAAATCCCATCGTGACTATCTCAATAAAACCACTCATCTCTA CTTATTTGTTCGCCATCAAGTAAAATCCCCAGACTGTCTCATTACTTAAT AATTTTATATTAATTCCATTCTTTTCAGTTTAAAATCGGTTTTTTGTATG AATTAAAACAAGAACCCATGTCCGCCCATAAACACTATGGTCACGCCTAT TCACTTCTTATGGAAGTTAGAGCTACTGATACAAATATTATGGAAGTCAA AACTGTCGCAGGATTTATTAACTATAAAGTCTGTCGTTTAGCATTTGCTC TTAATTTAAATAGGGATGCAATTGCGCAGTTTCGTAAACATGCCGATGTA TTTAGACATAAGGTTGGGTGTGATCGTTTAGCATTTGAGCACTCGGCTTG GCAATCTCAGCAATGTCATGTTTTTGCACAACTTTTTGAAAAAACAATCT CATCTTCAAGTGGTAATAACGCAGCTTCTCAAGCTCAACACCCTGGTAAA TAGAATGATTAAAAGTTGATTTTTGAGATATATAATTTTCACATTTTCAG GAGTGTATTATCAACAAGCTGCTTCCCATGCAATTTCTCGTAGACAACAG AGTGAAGAAGCTATTCAAGAGGAGCCCAACAATTTTGAAAATGTGAATAT GAATCTCTTGGAGAATGCTGATCATTTAGAATATTATGGACAAAGACCTT GGCGTCCTGGAAAGGCTACTCTTGAACCTCCTGACGTGGAAAGAGAAAAT TCTGGCATTAGAGCACTCATCTATTGGGAAAAAATGAATGTCAATGATTC CCAAATTATTATTACTCTCTTAAAGAAGTCCATATCCATCTTTGAGATGT TCAAATCCCCAAGGATGACTGCTCACTTAACTGTAGAAGTGGCCGAGGAG CTCAGAAAGGAGCACCAGTATCGGGAAAGTCTTGAGCTTTTAAAGCCTGT CATTAAAACTTATAGACAAGAAAAATGGTCTTTCCTACTCAATTCCGTTT TAAGCCTGAGTCTGAAATGTTCTTTTTTAATCTGTGCTATTCCGGAGTAT GCTTCATTGTGCTTGGAGCTAGGGTCTTTGGAAATACAACATGTTTCTCA AGAGGAAAAAAATAGGATTACTGGTAATTTGATCAAGTTGTTGGAGCGTC AATGCCCTTCAGCAGAGCCTGGATTGACGTCTAAGTCTGAAAGAGCTGCT GTAACTGAAGCTTTCCCTCTTTGGACTTCAAATCTGGAGTACAACCAAAA TACAGAAACTCCTCTTATCGATCTGCAGTCAATAAGTTCTAGTTCCTTTA ATATTAAAGTAACATTTGAAAATCAGGAACCAGTGACAGTGAATTCACCG GGAAAGTGCCGCTTACGCCTAGTTAATACTGGAACGAATTTTCCAGTACC AGTGCAAGGGGTTGAAATAAGTATCAATGATTGGTCCATTGATAGAAAAT TCAATGAACTTGTTTTTGTTGGTCCCTGCTCCTATCTGGATGAAATGTTC GAACTAAAACTTCAACAAAGTGATATTGATTTAGGGAAATTTTCGATTGT TAGTGTAGTTGTGACAATTGGAAGTAAATTTTTTATCAAGTTAAAAAAAT CATTTGTGGATGAAGTTGTGACAGATCATTTTCTAATTCCACCCTCTTCC TCTTCTAATGCAGATGCTATACTTAATATCATGAATGAACCAGACGTCAC AAAGGTTGTGGTTCGTCAAAGAACTCCTTTGCTTCAAATGAAAGTGCTAG AAAAAAACCCTATCCTTGTTGGAGAGTGGTTTAAAATAAAACTTGATTTC TTTAATGAAGAAGATAGCAAAATTGAGGATTTTGAATGTAAAACTATACT TCTTGACTCTCAAGATCCCTTGATTGGGGATACGACTAGTGTAAGCTACG ATCCTAGTTCTCAATTGGAGATAAAAYCTCCTACGGATGAAAATGTGGAA GCCTATGCAGTAACAAAACATATCGGAGAATTAGAGTCCTCTAAATCTCT TTCTTTCAATGTTTTTCTTAAGGCATCGACTACAGGGATCCGGAATGTTA GGATTAGAATCAAATACAAAATAGGGGACGAATTCTATTACACTCTAAAG CAGAATTTGAGCTTAAACGCAATAGAGCCTTTTGTAATTTCCACAGAGTT TCTTAGTGTGAGACAGCGAAACATTTCCAGAATTTATACTGACGAACCCT TTCTATGTATTCCTGAGGTTCGAAGTCTCTGCTCTGGTTCAATTCGTATT CTGGATTGCCGCATTGAGCCTCGATTCCCAGTTGAAAAATATTCTGAAGG AGAAGACGACTCTAGTTTGAAAAATTCCATATTGTTTCAAAAAGGTCTAG CTCGAGATTGTTTTTGTCTTCTTGTGAAAAGAGATAATTTAAGTAATCAT TTGGACATTCAAGATATTACAATAGGCAAATACATTATGGAATGGCGAAG GGATGACGAAAATGATATCAATGCAAACGTGACTTCTGTTTTCGAATTAT CACCAGCAAAACTCTCTTTAGGATCTCTTTTCATTCAAGCCTTTCATTCT CCCTATGGAGTCAAAAAATCCCCTTTTAATTTAACTTACAAATTGTCAAA TCTAACAGACAAGGTTCAAGAGTATTCATTAAATATCGAGTCTTCGGAAT ATTTCTTAATCTCTGGAAACAAACAAGTTCATTTTAAAATAATTCCTCAT CAGTCACGAACCGTCAACTATGTCTTACATCCTGTCAAAGCTGGTCCTAA AGTTCCATTGCCAAAATTAAATTTGAAATCCCTAAGATTGGCTCAAGGAC TCGACGTTAATGAGACATTGGAAAGACTTCTGCCTGAGTACATGATTGTT TTAGAGAATACGCATAAGGATGGATTTGTTAAAGGCCAAATTCGTGATGA ATGTTTCAAAAAATCATCTTCAATTTTTATTGAAAGCAAAATAAGTGATA AAAGTTCCAAGTCAAGATCATTCAAAAGTTAATTAATTAATTATGACTAT CGATTGTTGTATATTTAAATAGATATTTATTTTAAAGTTTATTGTACGAT TTGAGTACATTGCATTATACTTTTCCAACACTTATTAAACCCCGTTTTAT TTTATAAATCGATATTATAGTATTTATTCAATCTAGCCTCATTATAGATG ATGTTTTGAGAATACTCTGAACCAATTGACAGTTATTATAAGTATSCCTG CCGTAAAAGTTAAACAATATATGTATATATATATATATTCTTCATAGATC CCGTTAAACGTATTAGAGAGGACTTGAATGAGAGAAGTTAACYCCCTTCA TTTCAAGCACACATATCTCTTCTTTTTTTTTTTTTTACATACGCGATTTG AATGTTTTAGTTGTAAGCAGTAGAAGTTATTCATGACGTATTGCTTCAAG TGGGAAAAGTTGCTTGTCTTAGCTTAACAGCAAACTTGGTTTTTAAGACA AAATATTTTAAAGTTATTATACTTTTTATAAATAAACATGGGATGCTTCA AGTAAATACATCATTATTTTGAGAATCATAAATTCAATTCTGACAAGTAA CTAACAATATATTATTCTCCCTTCCTTTGGTAGAATGGATGAAGATAATG AAACGTCGAACCTTCTTAGTCCAGATCGAGAAAAAGGACTGGAAATAGAG GAAACCGAAAAGCCTCGATATCCTTATAGTGTWTTTTGCATTCTATCAAC AGAAGCCTGTGAACGGTTCTCTTATTATGGAATGAGAAGCACGTTTGTTG AAAGTTAATTAATAATTGAGCCTTAATTTTACCAATTCTTTTTTCCACTA TGACATTCTATAGCTATATTGGTGTTATATTTGCAAAGCCTTTTATCTAA ACACTCTATGGTAGGATACTCAAGTGAATCCGTGGACTCTGTTGCAAAAA CGCTGTATCATACATTTGTATTTTTATCTTATTTCACTGCATTGATTGGT GCATTTCTGGCAGATTCCTTTTGGGGGAAATTTAAAACAATATTTTATAT ATCCATCGTGTATGCTGTAGGACAAGCTATTCTAACGTTTGGATCTATCC CTGATGAATCAAATTGGACAAATCTTCCTAGAGAGTGTGTTGGTTGTTTA TATGATATCTTTAAAATCATTTTAAATTAATTAACACTGTGTTATTTTAT TTACATAGATGGCTGTCTTATATTGGTCTCTTACTTATTGCATTTGGGAC TGGAGGTATCAAACCCTGTGTTGTATCTTTTGGAGCAGATCAGTTTAAAT TACCAGAGCAGCAAAAAGAGCTCGATACCTTTTTTGATGTTTTTTATGCT TCCATTAACATAGGATCACTTCTATCCACATTTTTTACTCCCATGTTGAG AAATGTGCATTGCTATGGTTCCGATCATTGCTTTCCATTGGCATTTGGAG TTCCTTCAATTCTCATGGTTCTTGCTGTCAGTGAGTTTGAGCTTGATTTT TCTTGAATCTTTTTTTAAATAAAGTTGCTTTATTCTAGTGTTTTTTCTCG TGGGTAAGTCTTTTTATAAGCGAAGAATACCAGAGAGTAACATTGTATAC AACTTCTTCAATTGCCTCTGGGTAAGTATTGACTCATTCTCTCATTATTA ATATATTATTTGCTTCTAACAATGATTGCATTTATTTGCACAGTACATCT GTACATATCAAAGTAATACAAATAGTAAAATTATGTTACTTATGTCCCAT TTATATGGCTATTATTCTTTCAAACAAGACTCATAAATGTTTTAATTAGT AATTAATTTATCTGCATTTATAGGTTGGTTTTAAAAATCGGAAAAATCCA TACAAGTCAGAACATTTAGATGCTTCAGATTCGAATTATTCTTGGCTATA TAAAGCTGAACTCAATCCAAAGTATGATGTAAACTTCATTGAGGATGTAA TGGCCGTGCTTAAAGTGAGTGTGTTAATGATTCCATTTCCAATCTTCTGG TCGCTCTATGATCAACAAGTAAGTTAGTCCATTAAATTACTATCTTGATC TAGTATACTGTTTATTCAAAAATCAGGGATCACAATGGTTAATACAAGCA ACCAAAATGAATGGAGCAATCACTGAGTCCTTTACTCTCTTACCGGATCA AACGTCAATTTTTAATGCATTTTTTGTTTTATTCCTTATACCCGTTTTTA ATAAGCTCATCTATCCGGTTTTTGGTAAAATGACATTAATTTGATGTGTA TCGATTATTTGTTAATGAGGTAGTCTTTCTTTTCATTATGTAGATAGGTG CGGAATTTTGACAAAACCCCTCTCCAAAATTGCATGTGGGGGAATGTTTC TTGCATTAGCTTTTGTTATAGCTGGCATTTTGGAAATTGTTCTTGATAGA TTTCCCAACAAGTCTATTCATATGGCTTKGCTGRTTCCGCAATATTTTTG TCTTACTTGTGGAGAAATTATGTTTAGTATCACTTCGCTTCAATTTGTTT TTACTGAGGTGCTTATTTTGTTCAATTATTATAATATGTACTAATGCATA TATTTTCTGTTAAGGCTCCAGAGAAAATGAAAACTGTTGTTCAAGCATTA TATCTATTGACTACTGCCTTCGGCAATTTTATTGATATCATGATTATGGG GATTTTTGATTCTCTATTCTCTAGGGTGAGTAGTATTCGGAGTAAAAACT GTCTTTTCTCAAGTCTCTTTAAATAATAAGAATAGTAACCATTACTAGCA GAGTAATTGTACTTTCTATACTATAGGCAATGGAGTCATTTGTATTTAGT GCCATCATGTTTATGGATATGCTCATCTTATTGTATTTAGCAAGAAATTA CAAGCACTATCGACCGAGAAAGAATTGAAAATGTGATAATAAGTTCGGTT ATTTCGCAGTATTATTTGAATGGACATTGTATCTGGTTATTGTATTTAAA ATATATAAATATGTTTTATTTAATTTTTATTTATTGATGAAACTTGAATT CATTTTTTTAAGTCATATTATATTTTTTATAAAGTAAGTATATAATTTAA TAGTATAAT
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