EMLSAT00000007068, EMLSAT00000007068-702915 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007068
Unique NameEMLSAT00000007068-702915
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s3supercontigLSalAtl2s3:26414..28261 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007068 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007068EMLSAG00000007068-689834Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000031059EMLSAE00000031059-739987Lepeophtheirus salmonisexon
EMLSAE00000031060EMLSAE00000031060-739988Lepeophtheirus salmonisexon
EMLSAE00000031061EMLSAE00000031061-739989Lepeophtheirus salmonisexon
EMLSAE00000031062EMLSAE00000031062-739990Lepeophtheirus salmonisexon
EMLSAE00000031063EMLSAE00000031063-739991Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769753auto769753Lepeophtheirus salmonispolypeptide
EMLSAP00000007068EMLSAP00000007068Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007068

>EMLSAP00000007068 ID=EMLSAP00000007068|Name=EMLSAP00000007068|organism=Lepeophtheirus salmonis|type=polypeptide|length=361bp
MMSVQALRTQQYCLKWNNHNKNVSKVFDRLRVSEQFVDVTLSTADKKXIK
CHKIILSAGSGYLEEILEENPSDHPTIVLSQIVFEDLKLLIDFMYAGEVS
VEQAXLXRXXDAAKILKINGLYETAPFEEDGMSPSHEIATTTESATHSPL
KTTPNNTIVVETQKRKRNESSTDSKESTNPSSPKSLTSNPLFGVTNAYFL
TNANMNHTSPKPXQPVGSVPMLISKNDLSHTNESSSLPIKPMSPSDESNK
LSKINQILTNGQIRRYKQYTEETLQQALKEIMEGQSINRSSTKYNIPART
LRDWMKRLNIKSVFTHNMNNSNSSLKNDVDHKSLSEEELREISTHPDLTS
NEDLKARIQFL
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mRNA from alignment at LSalAtl2s3:26414..28261+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007068-702915 ID=EMLSAT00000007068-702915|Name=EMLSAT00000007068|organism=Lepeophtheirus salmonis|type=mRNA|length=1848bp|location=Sequence derived from alignment at LSalAtl2s3:26414..28261+ (Lepeophtheirus salmonis)
ATTGAAAGGTAGGTAAGGCGTGCGGAGAAGAGGGGGGAAGAAAATAGAAT CCCCTCTGTACAAGTTCCCCCTATCCTAAAAAAATTACCTTACCGCCTGT TGATTATTATATAGGTTATTATTCTATGTATCATCAGTTTCTTAGTAGCT GAGGAACAGGTTCTATCGGTTTGCTATCACCAACGCTACCACCTATTTGA ATAGCTTACAGCTCGATAAATCTGAAAGGCTCTCTCTTCCTCTCCATTTC TCTATTATTAAGGTAATAATAATTAATCGACAATCATTTTTATTTCATAA CATAACTTCAATATTTAATAATGCTAATATCAACCCTTTCATTTTGACTT CAAAGATTTTTAATTTCATTTAAAAATTTATATATTACGTTATATTAATA TATCAAGGTAGAGGTTTTGTTGTAGGATATATAAAATCTTGCGTAATGAA TTACATTAATTAATAATTACCCTCATATNACTATAATTCCTCTATTATAT TATCTTATAGAACCGATTGTGTGGCAAAGAAAAAAAAAACTTTATACAAG TGACCAGTATGATGAGTGTTCAAGCTTTAAGAACACAACAATATTGTCTA AAATGGAACAATCATAATAAAAACGTTTCAAAAGTATTTGATCGACTTCG TGTATCCGAGCAGTTTGTCGATGTAACTCTATCAACGGCTGATAAAAAGA GMATAAAATGTCACAAAATAATTTTATCTGCAGGGAGTGGGTAAGCTTTT AATGTTCTTATAATAGTTATAGATATTTTATATAATTATAATCTTAATTA TTATAGCTATTTGGAAGAGATTTTGGAAGAAAATCCATCGGATCATCCAA CAATTGTATTGAGCCAAATTGTTTTCGAAGATTTGAAGCTCCTTATAGAT TTCATGTATGCTGGAGAAGTCTCTGTYGAACAGGCTCSACTGGMTAGGST CTTWGATGCTGCAAAAATTTTGAAAATAAAYGGACTGTATGAAACAGCCC CGTTTGAAGAAGATGGAATGAGTCCATCCCATGAAATCGCTACGACCACA GAGTCAGCAACGTAAGTTCTTATTATAGATACTTGAATAATTATATGCAT ATTAAATAAGACTAATAATTAAAATATATGTGATTTAGACATAGTCCACT CAAGACAACACCGAATAATACCATCGTTGTGGAAACTCAAAAACGTAAAA GGAACGAGTCAAGCACTGATAGTAAAGAGTCAACAAATCCCTCCTCTCCA AAAAGTCTTACCTCGAATCCCTTATTTGGTGTCACAAATGCATATTTTTT AACCAATGCAAATATGAATCACACAAGTCCAAAACCCATKCAGCCTGTAG GCTCTGTTCCAATGTTAATAAGTAAAAATGATCTATCCCATACAAATGAA AGCTCTTCTCTTCCAATAAAACCCATGTCACCCTCTGATGAAAGTAATAA GCTGTCTAAAATAAATCAAATATTGACGAATGGGCAAATTAGAAGGTATT TTGATCTTAAAATGAATTAATTATCCCTTTAGCATGTCATTTTTTTCACC ATTTAGATACAAACAGTATACAGAAGAAACTTTACAACAGGCTCTGAAAG AAATTATGGAAGGMCAAAGTATTAACCGCTCTTCTACAAAGTATAATATT CCGGCTAGAACTCTGCGAGATTGGATGAAGAGACTCAACATTAAATCTGT ATTTACCCATAATATGAATAATAGCAATAGTAGCCTGAAAAACGATGTGG ACCATAAAAGTTTAAGTGAAGAAGAGCTAAGAGAAATTTCAACTCATCCT GATCTAACTTCAAATGAGGATCTAAAGGCAAGAATTCAATTTCTTTAA
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