EMLSAT00000007494, EMLSAT00000007494-703341 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000007494
Unique Name	EMLSAT00000007494-703341
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s430	supercontig	LSalAtl2s430:159418..165885 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000007494 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000007494	EMLSAG00000007494-690260	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000032947	EMLSAE00000032947-741875	Lepeophtheirus salmonis	exon
EMLSAE00000032948	EMLSAE00000032948-741876	Lepeophtheirus salmonis	exon
EMLSAE00000032949	EMLSAE00000032949-741877	Lepeophtheirus salmonis	exon
EMLSAE00000032950	EMLSAE00000032950-741878	Lepeophtheirus salmonis	exon
EMLSAE00000032951	EMLSAE00000032951-741879	Lepeophtheirus salmonis	exon
EMLSAE00000032952	EMLSAE00000032952-741880	Lepeophtheirus salmonis	exon
EMLSAE00000032953	EMLSAE00000032953-741881	Lepeophtheirus salmonis	exon
EMLSAE00000032954	EMLSAE00000032954-741882	Lepeophtheirus salmonis	exon
EMLSAE00000032955	EMLSAE00000032955-741883	Lepeophtheirus salmonis	exon
EMLSAE00000032956	EMLSAE00000032956-741884	Lepeophtheirus salmonis	exon
EMLSAE00000032957	EMLSAE00000032957-741885	Lepeophtheirus salmonis	exon
EMLSAE00000032958	EMLSAE00000032958-741886	Lepeophtheirus salmonis	exon
EMLSAE00000032959	EMLSAE00000032959-741887	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto773565	auto773565	Lepeophtheirus salmonis	polypeptide
EMLSAP00000007494	EMLSAP00000007494	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s430:159418..165885+

protein sequence of EMLSAP00000007494

>EMLSAP00000007494 ID=EMLSAP00000007494|Name=EMLSAP00000007494|organism=Lepeophtheirus salmonis|type=polypeptide|length=1126bp
MDWSISPIERQRHGDQFSSIGPVDGYVNGIQAKGFFMQSGLPPKTLAEIW
ALADMDSDGRMSFQEFSIACKLITNTLKGFEXPRGLPPSLLHPLPMSLPV
GGVMPAPAIQQPLAMPRMMPPSHTMLPPNSMMAALPPSAMPPNSMMAALP
PSAMPPNSMMPQLHPSMMIPVSMAPVPNMMNMQPIPTSIPVSIPNGPIVP
TPTSMSLNMQQQMVPMHDGSGSSTPQQQQIIIEWGIPPPTRVKYATVFNQ
SDRARTGFLAGVPARNILLRSGLPQNTLAQIWALSDADNDGRLSLEEFIL
SGYLCDLAQKGEPMPNVLPSNLLPPSQRKNKEVIISGTASNGGGVGTPSS
VKSAAEELSSPTSFEDKRRENFNKGHAELERRRQSLIDQQRKEEDERKKK
EKEEAEEREKQKRELERQRLAEWEAQRKAELIQHRQREQEKVLFLKAKQD
NLKQELEANREKVKNLTTNISDTRSGVTDVKTFIDGMRSSRDSKMGDMNA
LKLEARSKITDAKIAEGRDEELSHFEVKKQEKEKEVNVLREKLAILKNKE
EEKKDKYNSVKKILLELEEKLKLIIEVCRKLFSQFDEQRREVRAEKAKRI
RELTDPDAAWGVGFEVPTTETVVINTNIVHHLQSPVKNQEYIKYRALYEY
EARNDDELGFKVGEFILVHPGQDHEPGWLGGELNGRVGWFPEAYAERVDG
ALQPIAEEETAGSNSTLSXSTVRVLYDWTAIKRSELSIEKDQTINVTSIS
NDNWWQGESSEGKKGYFPANFVTTEHLEKRGTTPTEVPEVIGSSPSIDEP
QTDAPTSEIRCVALYPYNSEELGDLTFDQGDIIYLVSQAEDWWTGRIGDR
TGVFPFNYVEIIQDSTLKNDTSTIVNNTNDVQELPVKETESQEVNVDELP
ESIAKKTEEISEENKKENVTLDDTTGGVTNEIKAEVVPPSNAGTSSASAV
VVEGTGTTKRKNKKKKDESGKSPEIATVVAPYEATSKEQISLQKGQMILI
KKKNSTGWWQGEVQGGKGKKRQLGWFPANYVKIVGGLSSSSSDKQFSAAN
TPASQDDSTPKVESSVTTEKQTFRALFPYIANHEDELAFEADDIITLISK
EEEAWWKGECKGQIGVFPSNYVEIVE

mRNA from alignment at LSalAtl2s430:159418..165885+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000007494-703341 ID=EMLSAT00000007494-703341|Name=EMLSAT00000007494|organism=Lepeophtheirus salmonis|type=mRNA|length=6468bp|location=Sequence derived from alignment at LSalAtl2s430:159418..165885+ (Lepeophtheirus salmonis)
CCTAAACAACCAAGTTATTATAAAAATAAAAACCCCTTTTCATCAATATT
AAGGTAAATTGTAAACTATTGACTATCAAAATGGGACCAACAAATAAAAG
GACTCAAACCTTACTATCTATCAAAATTTTATCCCTCTATTGGATAGTTT
TATTAAATCATTATATATCTGACCTTAATATCTATTAAAAATATATTGTT
AAATCGCCATTCAGTCTTATTTCCGCCTTGTAGATAATCATATTACTTAT
TACAACGGAAAAAATGAGATAAGATGGAACGTACTCTTTTTTTGTACTTT
ACAATAAAAAGAAAGAAAATCTAGCAATTAAACAATTATCATTTCCATGC
CATAGAATATACATTATGTATTTTTAATTAGACTTAATTTTATAATGTAA
CACATATATTTTTCTCTCATAGAAAACTGCCCTATGTATGTGACAAAATT
ATATTTTTCAGAAAACCCATAAAATAATAAATATTCATCCAAAACTTTCA
TCGATGGGTTTTATAGATGGCTTGCAAGCTGCAAGCTTTTAACAACTATT
TACTCGAAACAATATATTGTGCACATAATACAATTTGCGATGAGAAGTCA
GTATTGTGTACAATATTAAGTATACACTAATACTGAAGATAAAATGGAGT
TAATTCACAAATCAAACAAACTTTTGGGAGAAAAAATGGAAAATGAATAA
TTTTTTTAAACACTTTTCCTCTTTTTATTTGGATGAAGTTGGCTTATTGC
TTAAGAAACACAATTTTTAGTTTAGATAATGAAGAATGATGATTTTTTAA
ACCATGTATGTTTGATAGGAAATTGATTTGCTCACACTCATTTGCAGAAA
TTGGTTTAGGCACATATTATATAATATAGTTACATTATAAAATTGGGGTT
AAATTAAAAATATATAATAGATGTTCTTTCTCAATTGAATGATAATTGCC
TAATGGTTAAACTTTCTCAAAAAAGAATGTATTTTTATTTTAAATGGATA
AGAACCCCATGAGCTGTTACAGTTTCGATTTATTCAAATGATAAAAATAT
TTTGCACTCTAGTCAAGCACAAAAATGAGTGCGTTCTATATTAATTTAAT
TCAGTGTTCCTTTGCCTACACAATCTGTGTTTATTGACGTTATTTTATTT
AAAATATATTATTAAGAGTATAAGAGAGAGAGAGAGCTAGCTGAACGTCA
TGGGATTGAGGTTTTGCTAGAGGCAAGAGCAGAGGTATCTTCGGCCGGAG
AAGAAGAATAAGAATTAAGAGGCAAAGAGGAAAAGAACTAGGAACTGTAG
TGAAAGATTTGAGAGGAATTGGGCCCAACTGAGAAAATCCTAGGATTAAA
AGGAGGCATCATAATTAACTATTTACACTAATTTGATTATTAATTAAGAT
TGAAAGATGGATTGGAGTATTTCTCCAATAGAGCGGCAAAGACATGGGGA
TCAATTTAGTTCAATTGGTCCCGTGGATGGATACGTAAATGGAATCCAGG
CTAAGGGTTTTTTTATGCAGTCTGGACTCCCTCCAAAGACTCTAGCTGAA
ATATGGGCCCTTGCTGACATGGACTCGGACGGTAGAATGAGTTTCCAGGA
GTTTTCCATCGCTTGTAAATTAATAACGAATACATTGAAGGGGTTTGAAG
KGCCTCGGGGTCTTCCTCCTTCTTTGTTGCATCCGCTGCCCATGTCACTT
CCCGTTGGTGGCGTCATGCCAGCTCCAGCTATACAACAGCCCCTCGCTAT
GCCTCGAATGATGCCTCCCTCTCATACCATGCTMCCTCCCAATAGTATGA
TGGCGGCTCTTCCACCCTCTGCMATGCCTCCCAATAGTATGATGGCGGCT
CTTCCACCCTCTGCAATGCCTCCTAATAGTATGATGCCGCAACTTCATCC
ATCAATGATGATCCCAGTTTCTATGGCTCCYGTGCCCAATATGATGAATA
TGCAGCCTATTCCGACAAGCATTCCAGTATCAATTCCTAATGGACCCATA
GTCCCGACACCAACTTCTATGTCCTTAAATATGCAGCAACAAATGGTTCC
AATGCATGACGGTTCTGGTTCATCCACTCCACAACAGCAACAGATCATTA
TCGAATGGGGAATTCCACCTCCAACTCGTGTAAAATATGCTACAGTATTT
AATCAAAGTGACCGAGCACGAACAGGATTTCTGGCTGGTGTTCCAGCTCG
CAACATTCTTCTCAGAAGTGGATTGCCCCAAAATACACTAGCTCAAATCT
GGTTAGACTCATTTGAGTTAAAATATTAAAAGATTTTTAAATTATTGGGT
TTTCTCTTTTAGGGCACTTTCGGATGCAGACAATGATGGAAGATTAAGTT
TAGAAGAGTTTATATTAAGTGGATATTTGTGCGATTTAGCTCAAAAGGGA
GAACCAATGCCTAATGTATTGCCATCTAATTTGTTACCACCTTCACAAAG
AAAAAATAAGGAAGTAATTATTTCTGGTACTGCTTCAAATGGCGGAGGAG
TTGGAACTCCTTCTAGTGTTAAAAGTGCTGCTGAAGAACTATCTTCTCCA
ACATCATTTGAGGATAAGAGGAGGGAGAATTTTAACAAAGGTCATGCTGA
ATTAGAAAGACGTCGTCAGAGTTTGATTGACCAGCAAAGGAAAGAAGAAG
ATGAACGGAAGAAGAAGGAGAAGGAAGAAGCGGAAGAAAGAGAAAAACAG
AAGTAAGATTAATCGGCATATATATTCCGTCTCTTTTTTTAAAATCTGAT
CTGATTCTAGACGAGAACTTGAACGTCAGCGCTTAGCCGAATGGGAAGCC
CAAAGAAAAGCAGAATTGATTCAACATAGACAAAGAGAGCAGGAAAAAGT
ATTGTTTCTTAAAGCCAAACAAGATAACTTGAAACAAGAACTTGAGGCAA
ATGTGAGCTCATAAAAATAATATAATTCCATTTAACTGTGACACGGTTTT
TATTTTATTCTTTTTAATAGAGAGAAAAAGTAAAAAATCTTACTACTAAC
ATAAGCGATACTAGATCTGGTGTCACAGATGTAAAGACGTTTATTGATGG
TATGAGGTCATCAAGAGATTCAAAAATGGGCGATATGAATGCATTAAAAG
TACAACTTAAAGATCAAAATGCTCGTTTGATCTCTGTGACACAAGAAAAA
GCAAAGNGTATGAATCAAATGTAAATCTTTTTATTTAGCATAATCCATAT
TTCTTGATTTTAGTTGGAAGCCAGAAGTAAAATAACCGATGCAAAAATTG
CAGAGGGTAGAGATGAAGAGCTATCCCATTTTGAGGTCAAAAAGCAAGAG
AAAGAAAAGGAGGTTAATGTCCTAAGAGAAAAGTTAGCAATTTTAAAAAA
TAAGGTAAGCAAAGTTAATAAAAATACTTTATATCTATGTATTTAAAACA
AAACGTTGATTGTAGGAAGAAGAAAAGAAGGACAAATATAATAGTGTTAA
GAAAATATTATTGGAACTTGAAGAAAAACTCAAACTTATTATTGAGGTGT
GTCGTAAACTTTTCTCTCAGTTTGATGAACAGAGACGAGAAGTTAGAGCA
GAGAAGGCCAAGCGTATTAGGGAACTAACAGATCCTGATGCGGCATGGGG
AGTAGGATTCGAAGTTCCTACTACAGAAACTGTAGTCATTAATACAAATA
TTGTGCATCATCTCCAATCGCCGGTTAAAAATCAAGAATATATTAAATAT
CGTGCTCTGTATGAATATGAAGCAAGGAATGATGACGAATTAGGTTTCAA
AGTTGGAGAGTTTATTTTAGTTCATCCTGGTCAAGACCATGAGCCTGGTT
GGCTTGGAGGTGAATTAAATGGTCGTGTTGGTTGGTTTCCTGAGGCTTAT
GCTGAAAGAGTTGATGGTGCATTACAGCCTATTGCTGAAGAAGAAACTGC
AGGCTCAAACTCAACCTTGTCTKCTTCCACTGTAAGGGTCTTATACGACT
GGACCGCTATTAAAAGATCAGAACTATCCATAGAGAAAGATCAAACAATC
AATGTTACTTCCATTTCAAATGACAATTGGTGGCAAGGTGAAAGCTCTGA
AGGAAAAAAAGGGTTAGTACTCTGTAGTACGTGAGATGTAAAATATTTTG
ATTCTTCATTTTTTTTAGATACTTCCCCGCAAATTTTGTCACCACAGAGC
ATTTAGAAAAGCGAGGTACAACTCCAACCGAGGTTCCTGAAGTAATAGGT
TCATCTCCATCTATTGATGAACCCCAAACTGATGCKCCTACCTCTGAAAT
CCGTTGTGTTGCTCTATATCCGTATAATTCCGAAGAACTTGGTGACCTAA
CCTTTGACCAAGGGGATATTATTTATCTTGTATCTCAAGCAGAAGATTGG
TGGACTGGACGAATTGGTGATCGTACGGGCGTCTTTCCCTTTAATTATGT
AGAAATTATACAAGACAGTACACTAAAAAATGTAAGTCTATATTCATAAT
TTGTTTTTGTAAATTGTAGAGTTTTTAATTGTCCTGTCTTGATGGATTGC
TTATGAGTGATGATGTTTGATAATTTTAAGAAAGTACTCATATACATATA
TAGTAAATGTAAASCAGCCATTTTTTTAACTAAAATAATTACTAATACAA
TATACAAATATGCAGAGACGATGCTAGTTTTCAATATTATTAAAACAAAA
AAAGGGGACTAACAACGTCCCTGCATACATGTATTGTTGATCATATTGTA
TCTCKCCTACCATAATTAATTCTCGTCATCCCTATCGCTTCCCTTTTCTG
AAATATTTTTGATTAAGGACACATCAACCATTGTTAATAATACCAATGAT
GTTCAGGAATTACCTGTTAAAGAAACTGAATCTCAAGAAGTTAATGTTGA
TGAGCTACCCGAATCAATAGCCAAGAAAACAGAGGAAATATCTGAAGAAA
ATGTAAGTACTTTTTTGTCGTCCATGATGTGTGATTTCCTATTTTATTTT
TGTGTGAATTGATATAATTAATGTGAAATTTCTGTAATTTATTTAATGCT
GCCATTCTAATTTACATTTTGTAATGTAAATAGAAAAAGGAGAATGTAAC
TTTGGATGATACTACGGGTGGTGTTACTAATGAAATAAAAGCAGAGGTAG
TTCCACCTTCTAATGCTGGGACATCATCAGCTTCTGCTGTTGTAGTTGAA
GGAACAGGCACTACCAAGAGAAAAAACAAAAAGAAGAAGGATGAGGTTAG
ATCATGTTTGGAAGACTCTTTGGGATTGTTACCATTATTATATATAATTT
TTGGATCATTTTAGCTATTGTTTTAATAATATTATTTTGCATGACACACC
AATTAAATTAATTATATGCGTTAATCAATGTATTATGTCAGTAATCCATT
AATACAAATGCTTTCAGAGTGGTAAAAGTCCTGAGATAGCGACAGTGGTT
GCTCCATATGAAGCTACTAGTAAGGAACAAATATCGCTTCAGAAGGGCCA
AATGATCCTAATAAAGAAAAAGAATTCAACTGGATGGTGGCAAGGAGAAG
TTCAGGGGGTAAATTATTGATATTTAGAAAGAAAAAAAGAATATTAATTT
AAGAACGAATTATATAATAGGGCAAAGGAAAGAAACGACAACTGGGTTGG
TTTCCAGCCAATTATGTAAAAATTGTTGGAGGGCTTTCATCTTCTAGCTC
AGATAAGCAATTTAGTGCAGCTAATACTCCTGCTTCACAAGATGATTCAA
CACCTAAGGTGGAGTCATCCGTAACTACTGAGAAACAGACCTTTCGAGCT
CTATTTCCATACATAGCTAATCACGAAGATGAACTTGCTTTTGAAGCTGA
TGATATCATTACTCTTATTTCCAAAGAAGAGGAGGCGTGGTGGAAAGGAG
AATGTAAAGGGCAAATCGGTGTATTTCCATCAAATTATGTTGAGATTGTC
GAGTGTAAGTCATTTCTATTTTTAGGTATTAAATTATAATGTTTTATAAT
GTGATTTTTTTTTTCATCTTTAGGATTATTGCGTCAATATCAAGTATTTT
GTTTTATCATTGTCATCTTTAGTTCAGGGGAAAACACAATAATAATAATA
CTCTCCATATTGATTATAATTAAATGTATTTGTCATTATGTGTTTAAGTT
TTTATTAAATTTTATTATTCATGCCCACAACCACCTCAGAATACTACTCA
TGTTATTAGTTAACTATGTATTTGTTTTATGTAGTTTAGTCAATTGTTTA
TAGTATCGTAAACCTCAAATAAATTATTCAATTTTTATTTTATTGAGTTT
TTAGTCAAAAACTTCACTCAGTGGTGGATGTGTGAGATCATTTATCAATA
ATCTGCATTCAATCAGTTATAAACATGGATAACAAAAGATAAAATATTTT
TCTGCGTGCCATATATAAGTCGTTAATATTATTAGTTATGATATTAACAT
TTTCATGGCCTCCATTAATTTCAATCCAGACATAGGGAGATTTTTTTTAG
ACATTTCACTAACTATTT

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