EMLSAT00000007741, EMLSAT00000007741-703588 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007741
Unique NameEMLSAT00000007741-703588
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s450supercontigLSalAtl2s450:172104..174744 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007741 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007741EMLSAG00000007741-690507Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000034173EMLSAE00000034173-743101Lepeophtheirus salmonisexon
EMLSAE00000034174EMLSAE00000034174-743102Lepeophtheirus salmonisexon
EMLSAE00000034175EMLSAE00000034175-743103Lepeophtheirus salmonisexon
EMLSAE00000034176EMLSAE00000034176-743104Lepeophtheirus salmonisexon
EMLSAE00000034177EMLSAE00000034177-743105Lepeophtheirus salmonisexon
EMLSAE00000034178EMLSAE00000034178-743106Lepeophtheirus salmonisexon
EMLSAE00000034179EMLSAE00000034179-743107Lepeophtheirus salmonisexon
EMLSAE00000034180EMLSAE00000034180-743108Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773820auto773820Lepeophtheirus salmonispolypeptide
EMLSAP00000007741EMLSAP00000007741Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007741

>EMLSAP00000007741 ID=EMLSAP00000007741|Name=EMLSAP00000007741|organism=Lepeophtheirus salmonis|type=polypeptide|length=648bp
SHFLHNPIHEIVKVAGHFLGRIGGEGSSSASDLSTSSSSSLLGDAGALNL
SESSEAVCDSFNRQKALAQKFRLFALHQRNLLTKKTHSKIVVNKTEMGTG
DRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRQRIYTCKAQGEF
KGRCPIDKTHRNQCRACRLKKCFDCSMNKDAVQHERGPRKSKLQKDLNSA
FRNGNPLLSPTSLNSSSPSSTTLNTLSQPSNFGISVTSSSNHQLHPLPPP
FHYSHHGHHLPSLLEPPKLSPFLFPAAXAAAAAAXAAAGSNLFLNPPTTL
NTTPPPSKLSPSSSSSSSSSPMSHHPLMSPPNVINSNSGVKMSHLTPHPF
FPHHQRPALLSLLSGENNKITELWKSPPPPLLSSSSILSIPPASGSAILP
PPPPLFPFFPSSVSKEDEESEHPPSSFSPTWPMLQETTARLLFMAVRWVK
CLAPFQTLSSKDQLLLLQESWKDLFLMHLSQWAIPWDLSNLLLSRHASLV
DRSDVEDHVVDMEIKTVQEIMCRFRQLSPDGTECGXLKAIVLFKPETAGL
NDFHPVEMLQDQAQCILGDYVRNRYSRQPTRFGRLLLAIPLLRMIRANTI
ENFFFRETVGDTSVIRLIQDMYNADKDIDNNEINSFVVNSLCAKCNIN
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mRNA from alignment at LSalAtl2s450:172104..174744-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007741-703588 ID=EMLSAT00000007741-703588|Name=EMLSAT00000007741|organism=Lepeophtheirus salmonis|type=mRNA|length=2641bp|location=Sequence derived from alignment at LSalAtl2s450:172104..174744- (Lepeophtheirus salmonis)
TCACATTTCTTACACAATCCCATACACGAGATAGTCAAAGTGGCGGGTCA
TTTTTTGGGACGAATCGGAGGMGAAGGATCATCATCAGCATCTGACTTAT
CAACGTCTTCCTCTTCATCACTCCTTGGTGATGCTGGAGCATTGAATCTA
AGTGAGTCTTCTGAGGCCGTCTGTGACTCTTTTAATCGACAAAAGGCTCT
TGCCCAAAAGTTTCGACTCTTTGCTCTGCATCAAAGAAACTTGCTGACTA
AAAAAACTCATTCGAAAATAGTTGTGAATAAAACTGAAATGGGAACAGGT
AATAATGCATCATATCTGTTTGAGGTACGTTTTTTTAATGTTTAACACAC
AAAAAAAAAAATGATTTAAGGTGATCGATTATTAGACATACCCTGTAAAG
TCTGCGGGGATCGAAGTTCGGGTAAACACTATGGGATTTACTCTTGTGAT
GGTAAGTTTGATGGATAATGAATGGATCATGTAATGTTTAACTATTATTT
TTAAATACTTAAGGATGCTCTGGGTTTTTTAAAAGGAGTATTCATCGGCA
AAGGATTTATACTTGTAAGGCTCAAGGAGAGTTTAAGGGTCGTTGTCCCA
TTGATAAAACTCATCGAAATCAGTGTCGGGCCTGCCGATTAAAAAAATGC
TTTGATTGTTCAATGAACAAAGATGGTGAGTTGATAATTTCGTTTGAGTA
ATCAATTTCTTTTCAATTTTGCTTGCTATCCTGATTACCCCCATTGTTTT
TTTCTTCTTCTTCTTCTCCTTACTGCTTAGCTGTTCAACATGAAAGAGGA
CCCAGGAAATCAAAGCTTCAAAAGGATTTAAATTCAGCCTTTCGAAACGG
GAATCCTCTTCTAAGTCCCACATCCTTAAATAGTTCTTCACCAAGTAGTA
CAACACTCAACACCCTGAGCCAACCTTCCAACTTTGGTATTTCAGTCACT
TCCTCTTCGAATCATCAACTTCATCCTCTTCCTCCTCCATTTCACTACTC
TCATCATGGACATCATCTTCCGTCGCTCCTTGAACCACCGAAACTATCTC
CTTTCCTTTTTCCAGCGGCAGSAGCGGCGGCTGCTGCCGCTSCCGCCGCT
GCTGGTTCCAACTTATTTCTCAACCCCCCAACAACACTCAACACCACACC
TCCTCCATCGAAACTGAGTCCTAGTTCTTCCTCCAGTTCAAGTTCATCCC
CCATGAGCCATCATCCCCTCATGTCCCCTCCAAACGTAATAAACAGCAAC
AGTGGTGTCAAAATGAGTCATCTTACTCCTCATCCCTTTTTCCCGCATCA
TCAAAGACCTGCACTCCTATCCCTACTCTCGGGGGAGAATAACAAAATCA
CAGAACTTTGGAAGTCTCCACCCCCACCGCTCCTATCGTCTTCTTCCATC
CTTTCCATCCCTCCTGCCTCAGGAAGCGCCATCCTTCCTCCTCCACCGCC
CCTCTTCCCCTTCTTCCCGAGCAGTGTATCGAAGGAAGATGAGGAATCCG
AGCATCCGCCCTCATCATTTTCTCCCACATGGCCCATGCTCCAAGAAACA
ACAGCCCGATTACTTTTCATGGCTGTTCGATGGGTTAAATGCCTTGCTCC
GTTTCAAACCCTTTCTTCCAAGGATCAAGTAAGGATCTATAAAGCAGGAG
AAAAATGTCCCTTACGGTTTTATTTTTATTATGTTATTCCCTAGTTACTT
CTCCTGCAAGAGTCATGGAAAGATTTATTTCTAATGCACTTATCCCAATG
GGCCATTCCTTGGGATTTATCTAATCTATTATTGTCCAGACATGCTTCCC
TTGTTGATCGCTCTGATGTTGAAGACCATGTTGTTGACATGGAAATTAAA
ACCGTTCAGGTACTTTTTAAAGTCTACAAATATTCATTGACACAAGTATT
TACCTTTTAGGAAATCATGTGTCGTTTTCGGCAGCTCTCTCCAGATGGCA
CAGAGTGTGGCTGMCTAAAAGCCATAGTACTTTTTAAGCCTGGTAAGGTG
AAGAGTCTCCTCTAAGCAAATGTAACTGTTTAATACTATTTGTTTTTTAC
CTTAAAGAAACTGCCGGACTCAACGATTTCCACCCTGTAGAAATGCTTCA
GGATCAAGCGCAATGCATCCTTGGTGACTATGTTCGCAATCGCTATTCAC
GACAGCCTACTCGCTTTGGGCGACTCCTCCTCGCAATCCCTCTCCTTCGA
ATGATCCGTGCAAATACAATAGAGAATTTCTTTTTTCGAGAAACTGTGGG
GGATACTTCTGTAATTCGACTCATTCAAGATATGTATAACGCCGACAAGG
TGACTCCACTTGTCTCAGATTAGGATTTAATAAACTAATAATTTTCATGT
TTCCTTTGGTTAGCACTTTATTCTTTCAACACATTTATATAATATAATAA
CCTCTCATCTGTGATGGGAAATAATCCATTTTTATCTCATTCAGACGTCT
TGATTTTTTCATTTTGTTTTTTAGTTGTTCGCATTTTAGCCCCTATTTTG
AATCTAGTCAGAACTGCATGTGTATTCATTATATATCTGTATTTTTTCTT
AATTGTAATGTGTGTTTTTTTCTAGGATATTGATAATAATGAAATAAATT
CATTTGTTGTGAATTCTCTTTGTGCCAAATGTAATATTAAT
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