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Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: -Missing-
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Gallery Image |
Title |
Gene or target symbol |
Sex/Stage |
Phenotype |
Date |
|
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neverland |
nvd |
unknown |
-Missing-
-Missing- |
14.04.2015 - 12:46
23.04.2015 - 00:00 |
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Neverland AD F 1 |
nvd |
female |
non
-Missing- |
08.05.2015 - 13:12
08.06.2015 - 00:00 |
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neverland |
nvd |
unknown |
non
-Missing- |
24.07.2015 - 13:01
30.07.2015 - 00:00 |
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Neverland fragment 2 |
nvd |
both |
non
-Missing- |
24.07.2015 - 13:04
30.07.2015 - 00:00 |
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Halloween gene |
nvd,dib,shd |
unknown |
Non
-Missing- |
08.10.2015 - 12:55
14.10.2015 - 00:00 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s495 | supercontig | LSalAtl2s495:91559..93015 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000008221 >EMLSAP00000008221 ID=EMLSAP00000008221|Name=EMLSAP00000008221|organism=Lepeophtheirus salmonis|type=polypeptide|length=388bp
MTCLIGGWLVFIPMNRVRHIENDSVSRQKVLNRIRRRRGSIPPPYPNGWY
IIAQSTQVTSGSKLRVSALGREFLIYRGLESNEVFVVDPYCPHLGADIYY
GGEVSKDSIICPFHHWKFDGHTGDCISIPYSKNEKRPSTKLKTVESSELN
GHIYIWYHANETERPLWRPVTLETFSTMSYQGRSEYEISCHIQDIPENGA
DVNHLDAIHRTGIIAGGNPGSFKILLSSLLAYHKWEVNWTSDDKTNPHIA
KVSLNHKMIIFGRFQTMDLNVKAYQIGPSIVHLHFQSPFFGEGVMIQSII
PVQPFLQKVIHTFYTNRFWPPPLAKFVLWGESILLERDIAVWNHKKYVKK
PVLIREDALILKHRRWYSQFYSEDSLSVGECNLSKNDW back to topmRNA from alignment at LSalAtl2s495:91559..93015- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000008221-704068 ID=EMLSAT00000008221-704068|Name=EMLSAT00000008221|organism=Lepeophtheirus salmonis|type=mRNA|length=1457bp|location=Sequence derived from alignment at LSalAtl2s495:91559..93015- (Lepeophtheirus salmonis)
ATGACATGTTTAATTGGAGGCTGGCTTGTGTTCATTCCTATGAATCGAGT
ACGACATATTGAAAATGACTCTGTATCAAGACAAAAAGTTTTAAATAGAA
TCCGAAGAAGGAGAGGGTCGATACCACCACCATATCCCAATGGATGGTAT
ATCATTGCTCAAAGCACTCAGGTCAGGAGATAATTTTTGTAATGTGCTTG
TTCCTTTGATACTTCTACTTAGTGATTATAGGTTACTTCGGGCTCGAAGT
TGAGAGTATCAGCATTGGGACGAGAATTTCTGATATACAGAGGTTTGGAA
TCGAATGAGGTCTTTGTTGTGGATCCATATTGTCCACATTTAGGTAACCT
CATAGCCCTCTATATCTAAGTTTCTTTTATCTCCTTGTTGAGATTTAGAA
ACTGATATGATATTCGTAAATACATCGTCTTAAATATGTATAGTTTATAT
ATTTTTATCTTTAAGTACCAGAGTAATGACATAATATTTTTGTATTCAAC
GTACCAATCTGTAGGAGCGGATATATATTATGGAGGAGAAGTTAGCAAAG
ACTCAATTATTTGTCCATTTCATCATTGGAAGTTTGATGGCCATACAGGT
GATTGTATCAGCATTCCTTACTCTAAAAATGAAAAGCGTCCATCCACCAA
GTTAAAGACTGTGGAATCATCTGAGCTCAATGGCCATATTTATATCTGGT
ATCATGCAAATGAAACTGAAAGACCCTTGTGGAGACCTGTGACATTAGAA
ACATTTTCTACAATGTCTTACCAAGGTAGAAGTGAATACGAAATATCATG
TCATATCCAAGATATACCAGAAAATGGAGCGGATGTTAACCATTTGGATG
CTATTCATCGTACGGGAATTATTGCTGGAGGAAATCCTGGAAGTTTTAAA
ATTTTATTGTCTTCTCTATTGGCGTATCACAAATGGGAAGTTAACTGGAC
TTCTGACGATAAAACCAATCCCCACATTGCCAAAGTTTCCCTTAATCATA
AAATGATTATATTTGGGAGATTCCAAACCATGGATTTGAATGTTTGTATA
CACATATGTTAATTAAAATGTTATTTATCTGACATTACATCGAGTTTTAG
GTTAAAGCATACCAGATTGGTCCCTCTATTGTTCATTTACATTTTCAAAG
TCCATTTTTTGGAGAGGGTGTGATGATACAGAGCATAATACCAGTTCAGC
CATTTTTACAAAAAGTCATTCATACGTTTTACACAAATCGCTTCTGGCCM
CCGCCTCTAGCCAAATTTGTTCTTTGGGGTGAATCCATTCTTCTGGAGAG
GGATATAGCTGTTTGGAACCACAAGAAGTATGTTAAAAAACCAGTATTAA
TTCGTGAGGATGCATTAATTCTTAAGCACAGACGATGGTATTCTCAATTT
TATTCGGAAGACAGTCTTTCCGTAGGTGAATGCAATCTAAGCAAAAATGA
TTGGTGA back to top
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