EMLSAT00000008342, EMLSAT00000008342-704189 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008342
Unique NameEMLSAT00000008342-704189
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s50supercontigLSalAtl2s50:1234628..1237194 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008342 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008342EMLSAG00000008342-691108Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000037061EMLSAE00000037061-745989Lepeophtheirus salmonisexon
EMLSAE00000037062EMLSAE00000037062-745990Lepeophtheirus salmonisexon
EMLSAE00000037063EMLSAE00000037063-745991Lepeophtheirus salmonisexon
EMLSAE00000037064EMLSAE00000037064-745992Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780547auto780547Lepeophtheirus salmonispolypeptide
EMLSAP00000008342EMLSAP00000008342Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008342

>EMLSAP00000008342 ID=EMLSAP00000008342|Name=EMLSAP00000008342|organism=Lepeophtheirus salmonis|type=polypeptide|length=467bp
MEKQCHHLNLKKVLGTGDLISLGVGSCVGTGMYLVTGIVAKTXAGPAVII
SYLVAGLAAMLSGLCYAELGVRVPHTTGSAYIYSYVTVGEIIAFIIGWBM
IXEXIIXTAACASALSTCVDILSTGAISNVTSTWGDVWDSPPDILAWFIT
LVMMFVFVNGVKSSIQLNNFLSIINFLSWVIVVFVGLFFIHLSNWSPFAP
FGIRGILKGAATCFYAFIGFDVIATTGEEAKDPKRSIPKAIITSLIILMV
AYVSCTIILTLMVPYVELNEEAALVRVWAQIGYPFLQWVICIGAVSALTA
SMFGSMFPMPRIAYAMAKDGLIFRFLSEVNDKGVPACATLCLGLIASVCA
LILPFEVLVEMMSIGTLLAYTLVDGCVLILRYQTDQQKNYPSFISDTEGV
DCGEEEETCPSIWGILYNYIFFHQLPVDEQTPVSQLSGKIVLKLCFXALI
LISSSSWIWICSFQQSH
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mRNA from alignment at LSalAtl2s50:1234628..1237194-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008342-704189 ID=EMLSAT00000008342-704189|Name=EMLSAT00000008342|organism=Lepeophtheirus salmonis|type=mRNA|length=2567bp|location=Sequence derived from alignment at LSalAtl2s50:1234628..1237194- (Lepeophtheirus salmonis)
ATGGAAAAGCAATGCCATCACTTGGTAAAATTCTCTTCTTCTTAAGAGGT TCAAAAGGAAAAGAAAGGATCTAATGTAATGGTACATTACATTATTATAA TACATTGCTATGGAGAGTCGTTTCTTATTTATTTCTTCGTAGCAAGGTTT TATTTATTATTATTAATAGTAGTAAGAAATAGTAAGCTTTCATTTTAAGA AGCAACTAGTGGGTTTCTTCACTTGGAGGGAGAGAGAAATAAGAAAGAGA AAAGTTCTTAAGACTCTTCATAAAAAGGTGGAGGGGGTAACCAGAATTAT TACTCGTCAATTGTCTGAGTTAACATGGAAGAAAAACAGAATAATACTCC GGCTCTGAAGCGGCTATTCCGCTTGAAACAGATTACAAATTTTCAAGAAG AAGATGAAGACTCAAAGGTAAGGAAATATATAATTAAGGGCGTCCGCAAA AGTGGGGTGTAGCCCCCCTCAAATGAAGGAATTTTTGCTTTTTATTAGAA ATTTATTTTGGCAGCTTGAAAAAATGAAACGAGGAATTAGGTAAATTTTA ATTTTTGAGGGGATTTTTTAAAAAAAAAACAAGTTATTTGGGAAATTTAT GAAAACAGAGCAAAAAAATGTAAAATTTGATTTTTTTCTTGGGAATAAAA GTAATTTTTTTGTTTTAAAAATATTTTTGAAATATTTTCCAAAGAAATTT AAATTTAGGGAATATTTTCTCAGAAAAATGTAATATATGAAATTTAAAAA AATTAGGTTCATTTATTGTTCACAGCCATGGATTTTTCCAAAGTTCAATT TATTTTGTATTGTTGTGGATTTTTGAAACAAATAATAATGTTTTTTTATC AAAAAAATTAACATTTGAAATTTTTTTTCAAAAAATTTATTGTCAAAAAT TGAATATGTGTAATTTTTTAAATCTTTTGTGAATAGCTATTGATTTTTGA AATGTTTTTCAACGAATTAGTTATTGTATTTTTTCAAAAGAAATCCAAAA AACTCCCCCCTCCCCCCCTCTAAAAAAATTAATAAATAGTCTTACGGACG CCACCCCTAGTCCTCTTAAATTTAGAGTCTATCCATCACAAGCTGGTTCT GTTTTCTTTTTTTACCATAGAATCTCAAAAAAGTTCTTGGAACTGGGGAT CTCATATCCCTTGGAGTTGGATCCTGTGTTGGAACAGGAATGTATCTGGT CACTGGGATTGTTGCTAAAACCAKGGCTGGTCCAGCTGTTATCATTTCCT ATTTAGTTGCAGGACTTGCTGCCATGCTATCTGGCCTTTGTTATGCAGAG TTAGGTGTACGTGTTCCTCACACCACTGGTTCGGCCTATATATATAGCTA TGTGACCGTTGGAGAAATTATTGCTTTTATCATTGGCTGGRACATGATTT TWGAATAMATTATTNGAACGGCTGCATGTGCCAGTGCCTTGAGCACATGT GTGGATATACTTTCTACTGGTGCTATCAGTAATGTTACTTCTACTTGGGG GGATGTATGGGGTAACTAATCAACTTATACTTTCGTGTTTCTTAATCCAT TGTCTTTGTCCTTTATAGACTCACCCCCGGATATTTTGGCTTGGTTCATA ACCCTTGTAATGATGTTTGTCTTTGTAAATGGAGTCAAATCCTCAATACA ATTAAATAACTTTCTTTCCATAATTAATTTTTTGTCCTGGGTGATAGTGG TCTTTGTCGGTCTATTCTTCATTCACCTCTCAAATTGGTCGCCATTTGCT CCTTTTGGTATAAGAGGCATACTAAAAGGGGCTGCCACATGTTTCTATGC TTTCATTGGGTTTGATGTCATTGCAACGACTGGAGAAGAGGCCAAGGATC CCAAAAGATCAATCCCTAAGGCAATCATTACGTCTTTGATCATTCTCATG GTTGCCTACGTTTCCTGCACAATCATTCTAACCCTCATGGTTCCATATGT AGAATTAAATGAGGAGGCAGCATTGGTTCGGGTTTGGGCTCAAATCGGTT ACCCATTCCTTCAGTGGGTCATTTGTATTGGAGCTGTAAGTGCACTAACC GCCTCCATGTTTGGTTCCATGTTTCCGATGCCTCGTATAGCTTATGCTAT GGCTAAAGACGGGCTTATATTCCGATTTTTATCAGAAGTGAACGACAAGG GTGTTCCAGCTTGTGCAACTCTTTGTTTGGGTCTTATTGCCTCTGTTTGT GCTCTCATTTTACCATTTGAGGTTCTTGTTGAAATGATGAGCATTGGTAC TTTGCTCGCCTATACACTTGTGGACGGATGTGTACTTATTCTTCGCTATC AAACAGACCAACAGAAGAACTATCCTTCATTTATATCCGATACAGAGGGA GTGGATTGCGGAGAGGAAGAAGAGACTTGTCCTTCCATTTGGGGCATTCT ATATAATTATATATTCTTTCATCAACTTCCAGTGGACGAACAGACTCCAG TCTCACAGCTCTCAGGGAAAATTGTTCTCAAATTATGTTTCKTGGCCCTC ATTCTCATAGTCATTGTAGAGCTCCTCATCATGGATTTGGATTTGCTCAT TCCAACAGTCCCATTGA
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