|
|
Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s527 | supercontig | LSalAtl2s527:163002..172818 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000008543 >EMLSAP00000008543 ID=EMLSAP00000008543|Name=EMLSAP00000008543|organism=Lepeophtheirus salmonis|type=polypeptide|length=802bp
MSSSVSPPNSFLLSTTTNPHLPSTILSAASATGHHHFRHPIDSHPHHHPI
SSSVCSSVLFSGPSPMTVRLPFTSSSSTTTSPSSASFSERNQSVVHKAVA
TNSSYSIGNNVEGQQQNNLSSSVSHHGGQPISCPGSSTKPTVILGETGGV
KTMFWTDGANSDHQTAVDGLLSLGGGLPIKREPLNLKREPPTPPPPSRRS
SPMNMEKLWAGDRSQLLDKMGPPPSSSTPSFLEMDNKGGLHIXSSXPTSX
ANINSNNPPPIHQSGGPGDNNNPSSQPQQSLVCMICEDRATGLHYGIITC
EGCKGFFKRTVQNKRIYTCVADGECEINKAQRNRCQYCRFQKCLQKGMVL
AAVREDRMPGGRNSGAVYNMYKVKYKKHKRANSSSGGTGXMNPSSTXGPG
TNSSSVSNNNNAATMNNNKSVVGGGGXPCKSSNPHLLIKSENSINNTSSS
RALLPPMTALPPGNGRNAPLHYEKMVVSSATLPSKVLPDLPSSSSSSSNG
GDSDGGTNLGRNILRAALTGSPDIPRQYRGLSKGPLDKRLYDPSYSPPDE
SSKLINELIICDDFEDIATLKNIGELLNQNTADLQQKLCQIGDSIVYKLV
QWTRRLPFYRDLPVDVHTKLLTHKWHELLVLXXSAYQAIHGSKRMGTTRT
DGEKVELHQEVATNLVTLQTCLTSMMGKPISMDQLWQDVGNMVEKITKVI
AIFRQFRLTMEEYVCLKVIAMVSQEDLKATSLASIHDRYLNCLKAFTRKN
FPREPHRVHDLLVRLPEVQVAASLLLESKMFYVPFLLNSSISSEASEFSK
NS back to topmRNA from alignment at LSalAtl2s527:163002..172818+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000008543-704390 ID=EMLSAT00000008543-704390|Name=EMLSAT00000008543|organism=Lepeophtheirus salmonis|type=mRNA|length=9817bp|location=Sequence derived from alignment at LSalAtl2s527:163002..172818+ (Lepeophtheirus salmonis)
CGAGGTGGAAGGATCCCTTTTTTTTATATTCGTTTCTCTCTGAAAGGCTG
ATTGTTTATTATTTGTTAATTAGTTCATTTATTAATAGTTCACTGTTCAG
TTATTCAACCCACAAATAAAATTCTTTTTAAGTAGTGAGGAGTGAATTAG
TGGCTTGTGTATCATCATTAAATTGCATATTTAAAGATTTCAAATAAAAA
AATGCGAAATCCACCGACTAAGAGTATTTGTATTACTGAAAAAAGTAGTC
CGGAATTCATGTTATATTAATATTATTATTTTGTTCAACTAATAGACAAA
AACAAAACACTTCAAAGTACAATAATAAATTATTAGAGTATATTATTCAA
TGATAATGATTAGTCAATCATCATTCTKCTCCGCGACTCCGAGTCTGATK
CTCCGACGTCCCCGACTACCACTATTACATATAGTAAAATGTATTTCATG
AGGTATGCATGCATTTTTATTATATTTACTATTGAGAATTTTTCAGATTT
TTTCCTCAAGACTGACTTGGGAGGGMCGATGCCCTCCAAAGTCATCCCTC
CTTTTTTAGTGTTATTATTTTTTATTTAAACGAGAGAGAGAAAAAAAAAA
AGAAAAAAAGAAATTTTTTTTTCTATTATTATTTTTTTTTGCAGCAGTGC
GTTTGTTGTCTAGAGGGCGCTTTTCCCTTTTTTTTATTTATATTTATTTT
TAAACCATAGAAATGATTTTCGTACATCCTAATTATTGACAAATTTATTT
TTGAATATTCAACTAATAATGATCTACGTCGTTATTAGGGGGCCTTACAT
ATGAAGAAATCAGTTTATATATATGTCAGGGAAATGTGTCAAGGATGTTA
TTTTCTCCGTATTTCATATTTCATTTCTCTCTCCCCCCCCCCTTCATTTA
CGTAAGAGCTAAAGTTAGTTAGTTATTAGTATTAAAGCTTTTTAGCAGGA
AAGAAACTACATCTGATTTATAAATGATTTTTTCTTTCAAACTATGATGT
AAAAATGAAATTTCTTTCATTCCCATTTTCAGGCACAAAGAAGGATCCTC
AATCCCAAATTATATTTTACAACAGACTTCAATAGAGTAGTAGTATTAGG
CGTKCCCAGCCTCTATCTTTCTCTACCCAGATCCTATTCTTCCGAATTCC
TCCTTCTCCACCATTAAATAATGAGAAAATGCGCTCTGAGCCATGAGTTT
ATTTCATAATCTGAAATTGAAAAGGCAGAAAGTTGAACCGCGGGATCTTA
GTGATGAAGACTATGCACTTACTACCTTAGCCCATACTTTGATCAAAAAG
GAGCCTTCAGAGCCGCCTCTTTCTCTTCGACCACCTCCATTACCCACCCC
CGCGACTACCACCACCCTCTTCTCAGGGATGGAATCCACCCAATTCATCA
TCTACGACGTGTATGTCGTCCTCTGTCAGTCCKCCCAACAGTTTCTTACT
CTCTACGACGACAAATCCTCATCTACCGTCAACGATACTTTCTGCAGCGT
CTGCAACAGGTCATCATCACTTTCGTCATCCCATAGATTCTCATCCTCAC
CATCACCCCATCAGCAGCTCTGTCTGCTCTTCAGTATTATTCTCTGGACC
CAGTCCCATGACCGTCCGCCTTCCTTTTACTTCTTCCTCCTCTACAACTA
CTTCACCCTCTTCTGCATCCTTCTCGGAAAGGAATCAAAGTGTGGTTCAC
AAGGCTGTTGCGACCAATAGTAGCTACAGCATAGGGAACAACGTTGAGGG
TCAGCAGCAAAATAACCTCTCCTCTTCCGTCTCCCATCATGGAGGMCAGC
CTATTTCATGCCCAGGCTCCTCCACTAAACCTACAGTGATTCTTGGGGAG
ACGGGAGGTGTGAAAACCATGTTTTGGACTGACGGGGCCAATAGTGATCA
TCAAACTGCCGTGGATGGACTCCTCTCTCTGGGAGGAGGCCTTCCTATCA
AAAGAGAGCCTCTTAATTTAAAGAGAGAGCCTCCAACTCCACCTCCCCCT
TCCAGGCGTTCATCTCCCATGAATATGGAGAAACTCTGGGCTGGGGATCG
ATCTCAACTCCTTGACAAAATGGGGCCTCCTCCGTCGTCATCAACGCCTT
CTTTCCTAGAAATGGATAACAAGGGAGGACTCCATATTGKCTCTTCCKCT
CCTACTTCAKCTGCCAATATTAATAGTAATAATCCACCTCCCATCCACCA
ATCCGGAGGTCCAGGAGACAACAATAATCCCTCTTCTCAACCGCAGCAAA
GTCTTGTTTGCATGATTTGTGAGGATAGAGCCACGGGGCTTCACTACGGA
ATCATTACATGCGAAGGGTAAGGGTCATTCATCTTTATTTCATCATTATT
TCATCTCAATTATAATAATTAGTTGCAAAGGATTCTTCAAACGCACTGTG
CAAAACAAGCGGATCTACACATGCGTTGCCGACGGGGAATGTGAAATCAA
TAAAGCTCAAAGGAATAGATGCCAGTATTGTCGATTTCAAAAGTGTCTTC
AAAAAGGCATGGTCCTTGCTGGTAATTCATTAGTATTCCTTAAATTCATC
CATAAATTATTATTAAATATATATTAGCCGTTAGAGAAGATCGAATGCCT
GGAGGAAGAAACTCTGGAGCCGTTTACAACATGTATAAGGTAGGGAAATT
TCTTTTTTGTTGAATTCACTCCTCCTCCTCCTTTGAATAAGTAGTTTTAT
ATTTTTATGTCCTTTTTTATTTTGGGAAAATGTTCAATAATGATGTGTGC
TCAAATGTCAATCCCCTAGCTCTAGCTATGCAATGGTCAACGGTTTTCTT
CTTCTTTTCTTTTCTTTTTACCCTCTCCTCCGAACAACTTATTATTATTT
TCCTTCCTCCTTTTTGGTATATAATTGCGCCTGCGCAATAGATTTGACCA
TTTTGAAATATGGTTTTTTATCTAACTAAAAGAGAAATTAAGGATACGAA
TATGAATACATTCTTCTCCTTCTCTGATGAAATAAGCAAATAAATAGCAA
GTCCTTCGTCTGTTAACAAACAAATATTGCAGTTCTTGACAGACATTTTC
GCAACTGTTGTGNGAGAGAAAAGGGAAAGAGAAGGAGCGAGTAAAAGGGA
ATGGAATAATWATTGCAATATTTCTTGTCTGGGAATTTTTCTTTCTTTCT
TTCTCTTTTCTCTTCTTTTTTTTCTTTTTTTGTCTTTTCTTTTTTTTTGC
CTTTCCTTTCAATGTACGTACATAGGAAGGAACGATCGAACAAACGAACG
TACAAGTTCAATTTGCTCATCTCTATTTATTATTATTATTATTTTACTTC
CTTCTTCTTCAATAGCAAGTAAGTATGTACAACTATTGTAGTATTGACAT
TGAGAGCCGCTCTAAGGCAACAACATCGACAAATACATTTGTGAGGGCGC
GGAGAGAGAGAAAAGAGTTTCTCGAGTGGGAGCGCCCGTAAAAGTCCCGT
TACAAAAAGATACTGTAAGAGCAGGCTGCTATGTTANCATATAAAAAAAG
AAAAGTAAAGTAAAAAAATCATGATCTTTTTCTGGGAGTGAGCGCATTGC
ATTAAAAAAAAAAAGAAGAAAAAGAAGTCTACTACTAAATAAATTAATAA
TCATAAAAAATGTCGTTCAGTGGAGGAATAACGGTAGTTTTCTTATATGA
TTTTATTTTGATATTTGATCTCTCCTCAACTTTTTGCTCCTGATTAAAAA
TAGAGAGAGAGAGAGAGAGAGAGAAATGATGAGATGAGCTGCTGCTGTTG
AACTCTACGTAACTGAGTGTGAGGAATGAAGGGCAATGAACTTTTGACAT
TTCTGACATCAGGATAGGAGGAAGAGAGAACTGTTTATTTGATGGGGGGA
TATATTAATTATTGACCACCACTCTTGAGTTATTAATGTCTAACACTCAT
TAGTTGTAATCTATATGTATTTATTTAATTAATTACTTTCTTTCAGGTAA
AGTACAAAAAACATAAGCGGGCCAATAGTAGCAGCGGGGGCACTGGAGKA
ATGAATCCTTCCAGCACCKGCGGGCCAGGCACCAACTCCTCCTCAGTCAG
TAATAATAATAACGCCGCCACTATGAACAATAATAAAAGTGTAGTCGGGG
GTGGCGGGKCTCCATGTAAATCATCGAACCCGCATCTTCTTATCAAGAGC
GAGAACAGCATCAACAACACATCTTCCTCTCGTGCCCTCTTGCCTCCCAT
GACGGCCCTTCCTCCTGGCAATGGTAGGAATGCTCCTCTTCACTATGAGA
AGATGGTGGTCTCCTCTGCTACTCTTCCTTCCAAGGTCCTTCCTGATCTC
CCTTCCTCTTCATCCTCCTCTTCCAATGGAGGGGACTCGGATGGGGGCAC
CAATTTGGGTCGTAACATACTACGAGCGGCTCTTACAGGATCCCCAGATA
TACCACGTCAGTATAGGGGACTCTCCAAGGGCCCTCTGGATAAAAGACTC
TATGACCCCTCCTACTCGCCCCCGGACGAGTCGAGTAAACTGATTAACGA
ACTTATTATTTGTGATGACTTTGAGGACATTGCAACACTCAAAGTAAGCT
ATTAAGGGGATCTATTCTCTCTCATGATATGTTAAATACATTATTTAATT
TTCCAGAATATTGGTGAGCTCCTGAACCAAAACACAGCGGATCTCCAACA
AAAGCTTTGCCAAATCGGAGACTCTATTGTGTATAAATTAGTGCAATGGA
CGCGTCGACTACCCTTTTATCGAGATCTCCCAGTGGACGTTCATACCAAA
CTCCTTACTCATAAATGGCATGAGCTCCTAGTMCTCMCCMCCTCAGCGTA
CCAAGCCATTCATGGCTCCAAACGCATGGGAACAACGAGAACAGACGGGG
AAAAAGTGGAATTACATCAGGAGGTGAGTTAATTGATTCCGCAAAGCAAG
GGATGTGTGTGTGTGTTGTTGTCGTTGCAAAATTAGGTCGAGAAAGTGTA
GAAGAGGAGCTATGTTAGTAGGATTGCAGTTGTTTAGATGGAAGACTATA
TTAAGAATGAAGGAGAGAAAGAGAGTTGTTCATACGAACAAAACGCAACN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNAGAGAGAGAGAGAGAGAGAGAGAAAGAAAACA
GTCAAATAATAATAATAATAATAAAAACGATAACAAATAAGTTTCTCCTC
TTCACTCCACGTTCTGCCGGCTTTTTTATGCCTCCCCCTCCTGCAAAATA
CAGCATACATACATAAAAAGGGGTTTATTGTAGATCATTGACCTTTAAAA
ATAAAAATAAACACAGAGAAAAACAAGGAAGGGGAAGAAAAATAGGAAAA
ATAAGACACGAAGGAAAAAGAGGAGAGACCAAAATATGACTGCCTCAACC
ATACTCCTACATATGTAGATACTGAATGAATCCATCTCCTCCAAACATAG
GTATTAAATATCCATTTACTTGCATTCATAGTGCAACTCTAATAAAATAT
GCACTCTGAATCTGGAATCAGTTTTATTTTGGAAATTAGGGGATGCTGCT
GCATACCAGTCCCTCAAAAGCTTATCAAGTTCCCTCCTCGATGACGTTGC
TAAATTGTATTTATTCTTCTTTTAATCGGATCTAGTACTAACTGGTGTTG
TGTCGGTCCTTATTTAGGACTGCGCTCGAGTCCAATCCCACTTGTCGGTC
CTCTAAGAAGGTACAATCTATCCCTTGTGACGACCATGAAGGTGGTTTTC
CTTTTTCCAAACTATTCCATTATATAATAGAATAAATTAAAGAACTAAGT
AACAATAATGTTGTATGATAATGAAAAAAATTATATTTTTTCCCAATATA
TGCACGTGCAATAATATTAGTACATATCGATATTTTTATGAAAAATTCCA
AGGACCGGTCCCAATGATTGACAATACTAAGGACCCATAGGACCGTTCGT
AAGACTAGACWAGACCGAATAAATAAGATCCGACACTACCTGGACTCGAA
AGAATGAATCAGGGCCGACACAACACTAGTACTGACATTCGGAAAGACCG
GTCCTAAGACTGGACTCGACCGAATAAATCAGTACTGACACAAGACTAGT
TGAGCCATTTCTAATCTTCAATGTAACATCATTTACCTTTCATAATGGCA
GGMCGTAATGATGCAATTGGGMCTTATGGAGTTCCAATGATCATCAACAG
AAATCTTGAGAGCTTTTAGATTCGGTCCTTTTGTCCAGCAGACCCTAACA
TGTAGACAGAAAGAAAAATCGAGCGAGTTGGTCCCAGCCAGAACGGAATT
TTGGTCTCTAAAATGTACTGTGTAACCTTTGCTTTGTTTTGCCAATGTAG
CATCCCATTTGGATCCAGAAAGCGATGTAGTGAGTAACGATGAGCCTGTA
TCCTGTTTGTAACATATGCCTGGCATTGTCAGTCAATTGGATGCAACAAA
TCCCAAGCTCATCACTCATCCTAGGTCCTTGGTTGTCATCAGGGTGCAGG
CTCCCTCTCAGTAACAACACTTTTTTCGATGGAGTTTGTTTTTCTTAGGG
GTTGGGAGGGGTGTCAATACACACAACTTGTCAGTTAATGGAAGGAATAA
TCCATTCCTTGCATGCGTTTTCTTATTCATATCATTCTAAGCGTCCATAT
TTCAAGTACGGACCTGCTATAATTGTTTAAATGATTAGGTTCTGACAAGC
CTGGTCATACTCCAAACGTGCGTACTTAGTGCATCCTTTAGTGTTGAGAC
TCTGTCCAGCACTTAATTTTTTTTTCTTTTTTTTTTCGATTCTTTCTCAA
CCGATTTTTCGGTTCAGACCGCGGACTGATATTTTTCGGGCTCACTTGAT
GCAACGGTTTTTGTCTTTCTCATACTATGAGATATAATTATTGTTTATTT
TTTTCTAGAAATTCCGTTATTGATACTTTCATTGTATATATTCAACAAAG
ATCTTACATAGATTATAAATATATGGATAACCTTGAAAATCTAAAAAGTA
CAAAATATGTTGTAGAACAAACATTGCATACATACCATTCAGAATATACA
CTCAGAATCTATATATTGCAGTATGACATTATAACTATACAACAAAAATA
TATAAGTATTTGACATTTAGATATGCTTTTAGTTTGACAATTGCTAGGGC
CTATGAAAATTCTTAATTCATTAGGATCGGATTAAGTGCCCTTTTGTGTT
CTCCAAGATTTAGAACTAATGGAAGATAAAAAGAATCAAACTTTTAACTT
GAAATCCATCTCGAAGATATGCTAGAAATTCGGAGTTCTGTATTCTAGGA
GATACGTCGGTCTTTCAAATTTAATCCATCAATTTATATGTATTTCATTC
TGCCAATGGGAAAATTCATCATAGTTATTTCTATTTAACCTTCGTATAAC
GTCATTATGTCGTGTTCATAATTTAAAACACAACTGACGTCATAAGCCAT
TTATATGTAAAATGGGTCTCGACCGAATTTTAAATAAGACCGATTTTTTA
AGCACGAAACTAGTCCGTATTTTTCTATGAACGGAATGAGTTCGGTCCAT
CAAAAATAATAAGGGTGTCAGACCGGTCTAGGATTTTCATACGTAGTCCC
TAACACATGTACCCATCCCCTTGTCAAGCATATTAATTAAAATTGTATTC
AATTATATTAATAATGCAACTCATATAGATTTTTTTTTTTTTGTGTTCTA
TTGATTAGGTTGCAACGAACCTTGTGACCCTCCAAACATGTCTCACTTCC
ATGATGGGCAAACCCATTTCCATGGATCAACTGTGGCAGGATGTGGGAAA
CATGGTGGAAAAAATCACAAAGGTCATTGCCATATTTCGACAATTCCGAC
TTACTATGGAAGAGTATGTCTGTCTCAAAGTGATTGCAATGGTATCTCAG
GAAGGTAAGAAGAATATATAAATAATTTTTTTTTTCTGTTTCCGACTAAT
TAATTACACATTCTGTTATTCTGTTTTTCCAGACCTAAAAGCCACCTCAC
TGGCATCCATTCACGACCGGTACCTAAACTGCCTAAAAGCATTTACACGC
AAAAATTTCCCTCGGGAACCTCATCGAGTCCACGATTTACTAGTCAGATT
ACCAGAGGTAGTAATAGGTCTCATCATATAATATAATTAATTAATTGTCC
CTCATTTCCAGGTCCAAGTCGCTGCATCTTTGTTATTAGAAAGTAAAATG
TTTTATGTTCCGTTTCTACTCAACTCCTCGATATCCAGCGAAGCCTCAGA
GTTCTCAAAGAACTCTTAAATCATCATTATCATATATACATCCATGTCTC
AGCCCCTCTTACAACACCTCCCCTCACACCAGTCCCCACCCCCAAACAGC
CTTTTTTTTAATAGTTAAAATACTTTTTCGTATGATGATGATAGAAAAGT
AGTAGTACTCTGTTTATTTAGTTTGTGTGAATTATTTTTTAGTTGTTTTT
TAATTTTTCTAAATTTGAAAAAGAAATTTCAAAGTATGTGTATAAAATTT
TCTTCGGGGGGTGAAAGCTTCAAATTCCTCATCAATGTACACTTTTGTGC
CTGAAAAAAACATACACTGACCTACAACGATCCTAAAAGGATCGATCAAT
CATCAATAAGAAGAATAAATTAAGATAATAATGCGTAATATTAATAAGGG
GGGAGAATGTTAATAATAAATCACCCATCTCTTTTAATCAACGTATTGTT
ATAATAACATATATATCACGACGTTACCGCCCTAACTCAAAAATATAAAG
TGTTATTTTGTGGTCAACTATCAACTAGTTCTTTTCTTCTAAGCAGTGTT
TTTAACGTTGATTGGTTGAGTTCGAACTAGACCCATTATATTTGTCAACT
ATGAACAATCCCCAAGAAGTATGTATTTTGGGGAAAATGTACTAAAAAGC
AGTGTTATTAGAACATGGTTAGTTGCCAACAAGAAAATCGTAGGGCAAAC
ATAGCAAATTTATTAAGTCACTTATTTTTTGACGTCATTGGAATCCTTTG
CTTAGATAAATATAAAAAATTAACAAAAATAGCTTAAAAGTTATCATTCA
AGCGGTTGCTAGATATTTTGTAAAACAATCGTTTAACTAAAAGTGAATTT
TAAATTAGTATTTACTTTGATTCCTTATTTTTTTTCACGCTATATTTATA
GCCCCTTCAATTATTCTAGCTCTAAGTTCCAAATACCTTGTTATAATATC
ATTGCCGAATAGCACCTATTAGTGTGGGATCGGTTTTAATACTGATTTAC
TTATCTTTTTTTATGGTCTCTTTGTAAGAAGCTATGATGAAACGTCAACA
TTTGAAATGAATTAATAAGTAGTCATTTCAGCTGTTGGGTTTACCATCAA
AGGGCAATTAGGACCAAATTGATAGGATTGCAGTTTTTTTTAGATCGATT
CAACACTAGAACCCATTTCATACTAGAAACTATACTATCAATATGTGGCA
CCTATAAATTTGAGTTTTTCTCACTCTGTCTTTGCGTGATATAATGTAGG
TAGCGACGACATAATATGTATCCCTCTAATTTAGTWTTACTATAAAATTW
TTTACAAAAATGAATCKCTGCCATTTTTTTTTTTTTTTTTTGAAAGAATC
CTTTGCGTTTTTTTACCTCCCTCCCTACCTTTCAAAAAAGTGAAGTTGTA
AAACAAATACATAATAAATATTCACCACAATCCTAGGGTACTTACAATTC
CGTTTATGTTATTATTTTAAATAATAACCTAATATACAAAAAAATAAGAG
AATTTTGTTTATGTGAT back to top
|
