EMLSAT00000008591, EMLSAT00000008591-704438 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008591
Unique NameEMLSAT00000008591-704438
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s52supercontigLSalAtl2s52:448398..457585 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008591 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008591EMLSAG00000008591-691357Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000038159EMLSAE00000038159-747087Lepeophtheirus salmonisexon
EMLSAE00000038160EMLSAE00000038160-747088Lepeophtheirus salmonisexon
EMLSAE00000038161EMLSAE00000038161-747089Lepeophtheirus salmonisexon
EMLSAE00000038162EMLSAE00000038162-747090Lepeophtheirus salmonisexon
EMLSAE00000038163EMLSAE00000038163-747091Lepeophtheirus salmonisexon
EMLSAE00000038164EMLSAE00000038164-747092Lepeophtheirus salmonisexon
EMLSAE00000038165EMLSAE00000038165-747093Lepeophtheirus salmonisexon
EMLSAE00000038166EMLSAE00000038166-747094Lepeophtheirus salmonisexon
EMLSAE00000038167EMLSAE00000038167-747095Lepeophtheirus salmonisexon
EMLSAE00000038168EMLSAE00000038168-747096Lepeophtheirus salmonisexon
EMLSAE00000038169EMLSAE00000038169-747097Lepeophtheirus salmonisexon
EMLSAE00000038170EMLSAE00000038170-747098Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777766auto777766Lepeophtheirus salmonispolypeptide
EMLSAP00000008591EMLSAP00000008591Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008591

>EMLSAP00000008591 ID=EMLSAP00000008591|Name=EMLSAP00000008591|organism=Lepeophtheirus salmonis|type=polypeptide|length=722bp
MSLTPENGGSKYRFWSCADIEIVPRGKLKVRCSGNGKYNRATGSCECDRL
FTGRRCQYELECSSDSDCGNGKCIDIQSTGSTIKQCFCNMGYFGRYCDKR
SSLNSKMSDLTSYQSRNFNDKMQMFYKTLPETGEIEVVLKVKGLSYGAIG
FRKKGTSTSCRNFPLIDEESEDELSSFESEQISRTPKFNKDLDLSAFIPK
GKLHAMDCTDMVIGMARGNLNRVFDGYTRDRSRPRRDSFWGGEEDLTSAL
AYEEDGETTIAFRRKMKSRTASIPKFYREDHVKYHGRTNRGVDTFNFFAK
VNNGGQCENQKFKYPSNCVDENDCLYTAKWSRNGNHIDFVVTNLVDDDTW
TAIGLSNDRFMGSSDIIAGYLDGTGNGIVNDMWVTTYTSPHPDDQQNLKD
MTYKRENGVSTLKFSKPITSPEVDRDVSLIEESVYLFFPYSGGSVRKNND
LKPVAKHYETPIVTQDTVTFSNCPLNWESGSHGVPGAEPEAETGYAASES
EAESGNAEVESEAESEGAYAEGEAESEGAYAEGEAESESSSAEGEAEXES
SYTEGEAKLESEAKFESQPRNSFPRRLPSRRRKHHNKIDHDSEPEAEQGS
EPESEGEKDLKADHSTNILKTRRRINRLRPMSHKEPHSEPESEPEKPSIK
HSFSTLRRSRIPSSRNPSEEEPEAEEDNGENEPRAAKLRSFKGNAGREET
RQKFRRVQGFHIHPSRNPDNSS
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mRNA from alignment at LSalAtl2s52:448398..457585+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008591-704438 ID=EMLSAT00000008591-704438|Name=EMLSAT00000008591|organism=Lepeophtheirus salmonis|type=mRNA|length=9188bp|location=Sequence derived from alignment at LSalAtl2s52:448398..457585+ (Lepeophtheirus salmonis)
GTGGCCATAAAATAGAATTGCTTGATCCTGAAGATAATATCCTTATGTCC TTAACTCCTGAGAATGGTGGAAGTAAGGGAACGGGCTGGATCGATGATGA CTCAACTGCTCAGAATCAGGAAATAAAATTACCACGAGGGTTTACATGTA AAAACTGTGCGGTATGTTCATATGATTATAAATCGTTTTCATGTGACGTC AAATTGTTGAAGTCGGCGATTTTAGGGCCTTAACAACCAAGTTTTATATG AATAAAAACACTTTATCATTATATTAAGGAAAATGATGAACGTTTGCCGT GTATTTGAATGTCAAAAAGCGATCCACATGTAAAAGGACTAAAACCTTAC TGTTTATCAAAAATCTATCTCATCTAATCTTAAAATGTTATTACATTATT TAAATACAATCATATTTCCAAATTGTGGATAAAAATTAACTATTCAAATG GAAAAAATAAGATTAATTTCACTTATTATCCTTAAATAAAAATAAAATTA TTTGAATAAATGTAGCAATATTATAGGGATTTTCAAAATTCAGTTTATCA TTGTTATCAAGTAGTAATCAATGCAGTTGAAAGTCTTTTTATTCTTAGAG CCATTTGATGAATTTTCATACAGATTTATAGGAAATTTATAAATTTAAAA ATATAAAATATTATGGCGTCGCCTTCAATACAATTTTATGACGTCAGTGA AAACGTACCATAATATACTACTAAACCATTTGTTTTAGTTACTAATTTTT ATTTATAAATATGTCTATGATTAGATCCGACTTCAAAGACAAGCCAAGGA ATGGGGTGAGTAACTTATTCAAAAATTTTATTTCGCTCAATGTTTTTTTA AACCTTTCCAAATACGATAGGTAAATACAGGTTCTGGTCATGTGCTGACA TTGAAATAGTTCCCAGAGGGAAATTAAAAGTCCGATGCTCTGGCAATGGT AAATATAATCGTGCAACGGGTTCTTGTGAGTGTGATAGATTATTTACGGG ACGACGATGTCAATATGAATTGGAATGCAGCAGTGATTCTGATTGTGGAA ACGGAAAGTACGTTCCTTAAATTTTATATATGTGATTCTTTTTAATATTA TGTGTGTCGTTGTGGTTTCAGGTGTATTGATATTCAATCTACAGGATCAA CTATTAAGCAATGCTTTTGTAATATGGGATATTTTGGTCGATACTGTGAT AAGCGATCCTCTCTCAACTCAAAGATGTCTGACTTGACGTCGTACCAAAG TCGTAATTTTAATGATAAAATGCAAATGTTTTATAAGACTCTACCGGAGA CGGGAGAGATTGAGGTAGTCCTCAAAGTAAAAGGACTTAGTTATGGTGCA ATTGGATTTAGAAAGAAAGGTACCTCAACCAGTTGTAGAAACTTTCCATT AATTGATGAAGAAAGTGAGGATGAGTTATCTAGTTTTGAATCTGAGCAAA TTTCCCGTACTCCAAAGTTCAATAAAGACCTGGATTTATCAGCGTTTATT CCTAAAGGAAAACTTCATGCAATGGATTGTACTGATATGGTGATTGGAAT GGCCCGAGGGAACTTAAATCGTGTATTTGACGGTTACACAAGAGACCGGT CAAGGCCACGAAGAGATTCATTCTGGGGAGGTGAAGAAGATTTAACTTCG GCTCTTGCATATGAAGAAGATGGAGAAACGACCATTGCTTTCAGAAGGAA AATGAAGTCCAGTGACAGAGCAGATGTTTCAATTGACAATGAGGATATGC ATATCATTTGGGCATTTGGGCAGGAATCGGGTGAGTTTCTCTCATTAAGG TCGGTTACTACATCTATCATGCGTGTACATGTAATTTTTTTCTAAGAACT TTGCATTTTTTTATCTTCATATCCACACTTGTAATTTTCGTGCTTCCAAA ATTTTAATTTATCTTAATTCTTAGGAATAAATTGTATATTAGTCAGTTCC AAAGTTAAACACGTCTATACATGATAGATGTGGTAGGTAACCTTACTCTT ATTTGGGCCTTAATTATTATTTTAAATTGATCTTAGACATGTATGATCAT AGKCCCTCCTCTGGTCTTGAAAAAGGAACTGCCAGTATTCCTAAATTCTA TAGAGAAGATCATGTAAAATATCACGGTAGAACGAACCGAGGAGTTGACA CATTCAATTTCTTCGCCAAGGTTAACAATGGTGGTCAATGTGAAAATCAA AAGTTTAAATACCCCTCAAATTGTGTTGATGAAAACGATTGTCTCTATAC GGCTAAATGGAGCCGTAATGGGAATCACATTGACTTTGTTGTAACTAACC TTGTGGATGACGATACATGGACTGCTATTGGTCTTTCAAATGATAGATTC ATGGTATTAATTTGGCTACTATGATAATCATAGGAACTAAGTTTTGAATA CTGTTTTGAAATTGCAGGGTAGTTCCGACATCATTGCAGGCTATCTTGAT GGTACTGGTAATGGAATTGTCAATGACATGTGGGTCACCACCTATACTTC TCCTCACCCTGATGATCAACAAAATTTAAAGGACATGACATATAAACGTG AAAATGGAGTTTCTACATTAAAATTTTCGAAACCCATCACTTCACCTGAA GTTGATGTATTCAAGTTACTTTTTTTCAATCAATTTCTGATGATTATTTT CTTATTGTTATAGAGAGATGTTTCATTAATAGAAGAATCTGTTTATTTGT TCTTCCCTTACTCTGGTGGGTCTGTCAGAAAAAACAATGATCTTAAACCC GTTGCAAAGCATTATGAAACTCCAATTGTGACCCAAGATACCGTTACATT TTCTAATTGCCGTAAATTTTATAATATATTAATTTCTCAGTTTTTCAATG AGTTATTTGCTGTTTTCAGCACTTAATTGGGAGAGTGGTAGTCACGGAGT ACCTGGTGCTGAGCCAGAAGCGGAAACTGGATATGCTGCTAGTGAATCAG AAGCAGAGAGTGGAAATGCTGAAGTGGAATCCGAAGCAGAGTCAGAGGGT GCTTATGCTGAAGGTGAAGCGGAGTCCGAGGGTGCTTATGCTGAAGGTGA AGCGGAGTCAGAGAGCTCATCTGCGGAAGGTGAAGCAGAGNCAGAAAGCT CTTATACTGAAGGTGAAGCGAAGCTAGAATCAGAAGCTAAATTTGAGTCT CAACCAAGAAATTCATTTCCAAGAAGATTACCCAGTCGTAGAAGAAAACA TCATAATAAAATTGATCATGGTTAGAGAACAAAAATCATACTACATACAA CTTTTTATATTTTTATTCTTCACTATGATTAAATTGTATTAGATTCTGAA CCTGAGGCAGAACAAGGTTCTGAACCTGAATCTGAGGGTGAAAAAGACTT AAAGGCGGATCATAGCACCAACATTCTTAAAACAAGACGTCGAATCAATC GACTAAGACCAAGTATAAATAACTACATCATCTATTATTGAATCATTTTA TAAAGGCTAAAACTTATTACAGATATTATAAGAAAGTCATATTCTGAATC AGAGAAATATCCTGGGTCTGGAGCTGAATCATATCCTAAGTCTGAAACCG AATCTGAGGCTGAATCCGAAGCTGAGTCTGAAGCTGAATCATATCCTGAA TCAGAAGTTGAGTCTGAAGCTGAATCATATCCTGAATCAGAAGTTGAGTC TGAAGCTGAATCATATCCTGAATCAGAAGTTGAGTCTGAATCGGAAGCCG AATCAGAAGCTGAATCTGAAACCAAAGCTGTATACACTGAAAGTGAGTCT GAAGCTGAATCAGAGGCAGAATCTGAAACCAAAGCTGGGTACACTGAAGG TGAGTCCGAAGCTGAATCAGAGGCTGAAGCTGAATCTGAGGCTGAAAGTG AGTCCGAAGCAGAAACTGGATATGAACCTAAATCGTCATATAGCTCAGAA CAATTGCATAACAATAGAATTATTAAAAATCCAAGAAAAGCTGTATCAAA TTTTAGACGTAGAATAAATCACAACAAGCATCATGCGACAGGTGATATAT TTTTTGAAAGACTTGATCTTTGTTCTATGAACTTCTACGTAGACTGTAAT TAATTTTGTTTTAATTATAGTGGATCAACAAGAAGATGAGGAATCTGAAG CCGAAGTTGTGAAAGATTCGTCTTCAGAGCATAAGTTCCACCCAAGAAGA ATTCATCGCTATCGTACCAGAGGTATATTGTTAGAGTTGTAGAAAAAATG ACTTAAAATGTGTATTATTTTTTGTAGTTGCAACTTGAACATGCATTTTG TTTTCGAAAGGTGTTATCAATTTTCATTATTATTCTTTTTATTTATGAAA GAAGGAAAACGCAAAGTATACATATGAATGATGGAGAGTAACACAGATCA TTAATGTTGTGAATCTTAAGCATTTTTTAGCCTGCGGGTTTAGTTATTGA TAAACAAACCACTGTTTATTTTTATTATCTGAAGCTGTTGTCATTATTCT AATTGCAAATAAGAGAGTGTCTGCTCATAAATGACGGAGAGTAAAACTGA TAATTCAGTGGAAAATTAACAAGTGTAAGTCGTTTATGTATTTGGAGTAG AATTGGGGATCGAGAACGGAGTCATTCCTATGTATCCTGTTACTATATAA TGTTAAGTAATATTTATCGAATGAACGTATTTTATTTAAAAAAAAAAAAA TTAGCCAAAGTAAATGATACGAAATGACCTTTTTTAGTTATAGGTATTTC AATTTTTTCATGTCGCTAAATAAATAATCTAAATTTTCCGATGACATAAA ATTTTATCTGACTCAAATAATCTATGGAATTTCTCCCCGACTCGTAGCTA CGGCTCTGTTCATAAGCAGAGCCGTACAAAAAAAAACTTATTCCAGGTGT CTGTAAAATTATATATGTACATATTTTCGTTATCAATCCTGATTAATCAA TCCCTCAGGAGGTGAAAATCAAAATTCCTTATAGTAATAGGGAGTGTCCG CAGGATTATATAWATACATATWCTWTTRTTGGGGGGGGGGGAATTTAAAA AATCACTATCCACAYAAAATTAAATTTTTMGGYYAAAAKATATTCAAAAA TTCATTAAAAGATTAGAATTATTTTTTCCTAAATCCACAGTANNNNNNAA AAATCMACAGTWATTYACAAAAAATTAAWTTTTTGGGGGAAAAAATGTAA TACCAATATATTTGTATATATGACATCATTTCGCTTCCTTTTTGGTGTAT CATACCTGCAGCGCACTTTATTACTACTCAAAAACATAACAGAAAGTACT TTAAAGTGCTCCCTACTTTGTTTAATAAGATATTTTAGTTGTTTTATTGG TTCTAAGTTGAGAAATGATATGACAAGAACAGTGACATAGAAAATGTAAA TAATTACATTCCACTAAAATAAGCAGGCATCAACTGATATTATTATTATT ATTTTAACCACATCGAGTGGCAGTATTTATTTACATCCCTGGTCACAAAT GTAAAAGTTGATTACAGGGGCGTCCGCATTGAGTGCCCTGGAGCCCTCCT CCCACCAACCCCAAATATTAAATTCTTCAATTTTTTTTGTATAAAAAATT TACTTTTCTGTGAAAATTTATAAAGTTTAGAATCTTTTATCAAAAAATTT TAATATTTGAAAAAAAATTTAATATCCATATTAAAAAAAACTAAATTTTT AGTAAATTATTGTGGATTTTAGAAAATATTTTCCAGAAAATTAAATTTGT TGTGAATGACTATGGATTTTTGGAGTTTTGAATATTTTGTTGAATGGCTT TAATTTTTTTTTTTTAAATTCTAAAAATCGAAACAAAATAAATATATACA TTTATATATATATATATAATAATCCTGCGGATGCCCCTGGATTACAATAT CTTTCGAACGTGTACTCATATATGTATGCACTTAGTTTTGGAGTGGACCA ATTAACAATTTAATGCTTAGAATTTTTCATTTTATAATTTTCAAATCTCA ACAATTTTTCCTTTCAAATTAAAAAGTCTCTGCGATTTAGAATGTGCATT GTTTGTGGAAGTGAAAATGACATGATAATATAAATTTTTGGAAATACAAA AATTACGAACGTGGTATTTTGTTTCCCTCTAAAAAGAAACATTTTTAAAT CATAGTACCTCTTTATTTTAATAACGAGAATCGTGGAGATTTGAAATTAT AATTTGACAAGTTCGTAAATGAATTGAGCACACACGTATGATAGATGTAG ATGTATTCTAACTTAAGTCCTCTTAAGATTATATTTAAAATTGAGGATCA ACATTGGAATAATTTCTGACTATATAACGGTGTTACCTCGCTAACACAGA AATACCCAATGTACTTTATTGTCAGCTGTCAATTCCCTCTTCTTGCTTAA TACGTCATGGCTATTACATAATTTATTCTTTTTTACAAATAAACAAAGTA ATTCTTGCTGATCCTTTGACATTTATATAATATATAGAGTGGTGATTTTA TTATTTACATATATGAAGAAATTTTAGCTATCATATAGAAATACAAATTT ATAGCTACACTTTTAATAGAAATATTACTTAGTAGTATTATAATACGGTA TCGAATAAAATACTATGTAGATTTTAATAGTATAAAAATTATTGTTGACT TATATGGCTAATTACCAGATGATCTCGGGGCCCTTTTTTCTTGTGTGTGT GTTTTTCTTCCGGAGGAAAGGTTGTGTGATATAATAAAGGTAACGACGTT TTGCCCTTTATAGTTTCAGAGTGGGGTTCGTCTTTATTTCCTTCCTCCCA TGCAAATATAATATCTTCTCCCAAGCATTGTTCAAAATGTCAGGGTTGCC ATATTTTCTACAACTCTTTATATTGATGAGATAAATATTATATTATGATT TAAATGTATATATTTTATTATAGTGAGTCATAAGGAACCTCATTCTGAAC CAGAGTCTGAGCCTGAAAAACCATCAATCAAGCACAGTTTTTCCACTTTA AGGAGATCCAGAATTCCTAGTTCAAGAAGTAGGTTGATATTGCAAAAATG TTTCAAACGCTTTTCTTATTTTAATTAACCCTAACAGATCCCTCCGAAGA AGAACCTGAAGCAGAGGAGGATAATGGGGAGAATGAACCTCGTGCTGCCA AACTTCGAAGCTTCAAAGGTGATAATTACACCAATAATAATTAATTAATA TTCAAATTGATCAATTCAAAAGCTTATTATTTAAATAAATTAAATTAGGA AACGCTGGTCGTGAGGAAACAAGACAGAAGTTCAGACGTGTACAAGGTAT TTAAATCAACTTGAAGAACACTTATGGTAGCTTGTATGATCTCGATATAA TAATAATAATATATGTGGTCCGTCAATACAAAATCAACCTAGAATGGTTT TCTCAAAATTGAGTGTGGTTTACTTTTGTATTCCTTGACAAATTAACGTC AACTTCAATCAAAAAAGTGTTCTTATGAACCCTTTGGATGTGCTTCAAAT TGCTCTAAAAGTAGTCAAAATTGATGGATTTTATTTGAAAAGCTATATCC GGGTCATTATAAGTCTTTCATATCAAATAAAAAATATATTGAGATTTTCT CCTTATTAATTTCACTAAAGTTATTTTTATATTGAAGCATCATATACTCT TTTTTAAGACGCATTATGCAAAGTAGACATACTTACTTTATTTTATGAAT GGGAGTCCAGGGACAGCTGAAAGTTTTTGATTGTTTCTCTTATAAATTGC ATAATTTAAATTATTGATATATTGTATCAAAGTTCAAAACTTGCACATTT AGGATAAATTTGATATGCTATAACTCTCAGTACATAGTATTCTATTGCAA CAGGCAAAATATTAAAAACAAGAGATGAGTGTACCATTTTTTTGGTAAAA TTGAGATAACTTAATCTTTTACTTACCCTTACAGTCCAATTTCTTCTTTT ATCCTCTTTGAAAGATTATTTATTCCCCTTTTTATATATGAAATAATTCT GATAAAAAATATATTGAAATTAAACCAAGGATTTTGGGCCTTAAGTTTTT TTATTTTGAAATTTTTGACAAGAAAGTGCTGCTAAAGTTTCTTGCTTTGA GAATAGCCTTGTCTTTTCTCATGAAACAAAATAGCTAGAAAAACCAAAAT CCCTGTTTTTCTTTTTCTAAACATAATTTAATTAAGTTTCTACTGACATA AACAGCATATCAACCACCCTCATGGTTAGTGTTGGATCGTTCCTAGGACT GATTCCCTAATCACTCTCAATTTTTACGTTCAACGGTCCTTCAGTCCTAC GATCCTAGGTATATTTTAATTTTTACTCCTTGCTGGAATTGAAGAATATA AAAACAAAGAAAATAATATATGATAGCCATAGTGAATAAGATATGAGTAT TGTAAGTTTGATCTAGCCACATAGCTCTTATTGTTGTGAACATAAAATAC CAACAAGGATCGTTTCTTGGATTGACAAATTTTATTACGATCCCACTAAT AGGATGCAGTCTTTTTAGTTTGTTTAGAGTGATAGCACACTCCTCATTGT CTATATCCCATTAATTCCCTATCGTTTATTTGTAGGTTTTCACATTCATC CATCAAGAAATCCTGACAATAGCTCATAACAACATTCGACATTATTTAAA TATTTGGATCCTTACAGAATTAAATCCTTCCACTCTGTCCTTCTTCCTAT CCTATCCCACCTTTCTACGACCTGTACGACCCATCTCACTTTCTTATATT TAACATTTATGACTCCCAGGAAATACTAATTCCATTGATTTGTAGTTATA GTTTATATAAAGGATCCCTACCTTAATATCTTTTTTTTTACGTTATATAG CAGTAAGACAACGAAAAATCCCAAGAGCTAGAGTTCTTCGACGACGGCAA AGAATCCCCGAAAGGTCCGAACTTATATCATATTTTACATATTTTTAACA GACAATCATACTATTTCCCTTATTACAGTCATNCCAAGCAAATAACAAGG TCATAAAGAACCCCTCTCCTAATCCCTCAATCCTCTTCGAATTCTGTATA TGAATAGTGTATTTATCATGTTCTCTTCAAAATAGTTACTCCTTCAAAAT TGAGATAGTATTAAAATATATTAATATTTAAATTTGTGATATAGTGTTTT TCTTCGACATCATTCCGAATATTTATGCTAAAATATATGTAAACGGTGAC TCCAAAAGAATAATTTGATTACCTACAATAAGTCATTA
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