EMLSAT00000008682, EMLSAT00000008682-704529 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008682
Unique NameEMLSAT00000008682-704529
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s538supercontigLSalAtl2s538:211023..212397 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008682 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008682EMLSAG00000008682-691448Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000038527EMLSAE00000038527-747455Lepeophtheirus salmonisexon
EMLSAE00000038528EMLSAE00000038528-747456Lepeophtheirus salmonisexon
EMLSAE00000038529EMLSAE00000038529-747457Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774595auto774595Lepeophtheirus salmonispolypeptide
EMLSAP00000008682EMLSAP00000008682Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008682

>EMLSAP00000008682 ID=EMLSAP00000008682|Name=EMLSAP00000008682|organism=Lepeophtheirus salmonis|type=polypeptide|length=412bp
MTVLFSDTATTTSMSAKLPTSXNNPFLPPLPATLNGDITHSAITAASQLR
TLYGLEYPSPLLPSTTLSVLSQHHRQLLELQARYSAAARLVGSPGFTIPS
SSDLGTQSVAPHPNVLNNSVSTTVSPSISPSAXNPNPITTRPSGMIGGSK
PKVATPEVVSKIESYKRENPTIFAWEIREKLISEGVCTNNTAPSVSSINR
ILRNRAAERAAAXFARAAGFPSMYSHYPGLPSPIPPPPPPGTASFVPPPS
FLHSLHGDHRSAILLGGHPGCATSISLPNQLISSTRIEQGDGSSPPKFDY
DRRSDASSDDERPQFRRSRTSFNQDQLEYLEKQFEKSHYPDLKTREELSD
HTNLSEARIQVWFSNRRAKWRRHHRMSLFRPYDLNGSVSSPSVGHINTSI
PYQTTSITSSSI
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mRNA from alignment at LSalAtl2s538:211023..212397-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008682-704529 ID=EMLSAT00000008682-704529|Name=EMLSAT00000008682|organism=Lepeophtheirus salmonis|type=mRNA|length=1375bp|location=Sequence derived from alignment at LSalAtl2s538:211023..212397- (Lepeophtheirus salmonis)
ATGACTGTTCTCTTCTCTGATACCGCTACTACGACCAGCATGAGTGCCAA
ACTTCCCACATCARCCAACAATCCATTTCTTCCACCACTTCCTGCGACGC
TGAATGGGGACATCACACACTCAGCCATTACAGCTGCATCTCAACTAAGG
ACTCTCTATGGACTCGAATATCCTTCACCTCTTCTACCATCTACAACACT
TTCCGTTCTATCCCAACATCATAGGCAGTTATTGGAGCTACAAGCACGTT
ATAGTGCAGCTGCAAGACTAGTTGGATCTCCTGGATTTACTATTCCCTCC
TCCTCTGACTTAGGAACCCAATCTGTAGCACCACATCCCAATGTTCTCAA
CAACAGTGTATCCACAACTGTCTCTCCATCCATTTCACCATCGGCGGYTA
AYCCTAATCCGATCACAACGCGTCCAAGTGGTATGATTGGGGGATCCAAA
CCAAAAGTTGCTACTCCAGAGGTTGTGTCCAAAATTGAATCCTATAAACG
AGAAAATCCCACCATTTTTGCATGGGAAATCCGAGAAAAACTCATATCTG
AGGGTAAGTCTTTTTTTTTCTATTTAAATCATTCGTAAATTATTTTAAAT
ATTGAATGCAATTAAATAGGTGTTTGTACAAATAACACGGCTCCCTCTGT
CTCAAGTATTAATCGCATTCTTAGAAATCGTGCCGCAGAAAGAGCGGCAG
CGGYATTTGCACGTGCTGCAGGCTTTCCTTCAATGTATTCACACTACCCA
GGACTCCCCTCCCCAATTCCTCCTCCTCCCCCACCAGGAACAGCCTCCTT
TGTTCCTCCTCCATCTTTTCTCCATAGTCTCCATGGAGACCATCGATCCG
CTATACTTTTAGGTGGACACCCAGGCTGTGCTACTTCAATTAGTTTACCA
AATCAACTCATATCCTCCACTAGAATAGAACAAGGTGACGGATCCTCTCC
ACCAAAGTTTGACTATGATCGGCGATCCGATGCTAGTTCTGATGACGAAA
GACCTCAATTCCGAAGGAGTCGGACCTCATTTAACCAAGATCAACTCGAG
TACCTTGAAAAACAATTTGAAAAGAGCCATTATCCTGATCTCAAAACACG
AGAGGAACTCTCTGACCACACAAACCTCTCCGAGGCACGAATTCAGGTAT
GACAAAATTATAAATCCTTCTTTGTTTTGATTGTAATCTTACTAATCTAT
TTCCATCGCTCTGTAGGTCTGGTTTTCCAATCGTCGTGCCAAATGGAGGC
GTCATCACCGTATGAGTTTGTTCAGACCCTATGACTTAAACGGATCCGTG
AGTAGTCCATCTGTAGGACACATCAATACAAGCATACCATATCAAACAAC
TTCCATCACCTCNTCCTCAATCTAG
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