EMLSAT00000008875, EMLSAT00000008875-704722 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008875
Unique NameEMLSAT00000008875-704722
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: no visible phenotype
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
AP F246 T9_8875 female
  1. PreAdult2
  2. Adult
-Missing-
no visible phenotype
07.03.2018 - 13:26
10.04.2018 - 00:00
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s554supercontigLSalAtl2s554:308537..314923 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008875 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008875EMLSAG00000008875-691641Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000039449EMLSAE00000039449-748377Lepeophtheirus salmonisexon
EMLSAE00000039450EMLSAE00000039450-748378Lepeophtheirus salmonisexon
EMLSAE00000039451EMLSAE00000039451-748379Lepeophtheirus salmonisexon
EMLSAE00000039452EMLSAE00000039452-748380Lepeophtheirus salmonisexon
EMLSAE00000039453EMLSAE00000039453-748381Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776170auto776170Lepeophtheirus salmonispolypeptide
EMLSAP00000008875EMLSAP00000008875Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008875

>EMLSAP00000008875 ID=EMLSAP00000008875|Name=EMLSAP00000008875|organism=Lepeophtheirus salmonis|type=polypeptide|length=303bp
MSWKECVFLFVAALFVEGVRSSSSYNISFIQPDPIRMGTDGNISLWVQYD
RTGKTPQSPIEVQLNFTNQRSWAIEFNSPPLLIFQPHEIRSNLTKNISLS
SVVIGIQNIQIQSKLTSDPEGTLKTQDETIQVRVIVASRLLNNIFVGVIT
IMVLINTINMGGQLDVVIIKEVFRHLVAAGFIVAISGYILGAGFAWLFRL
KLPQIIAVSIETTFQNAGIAFVLLKISLEEPYGDLASVAPIAQLMLTGAP
LWLVLLCKKIYDKCCKKEEAEHERVPVEDPHNEKGKHDQSIIFKPSNKGT
SPA
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mRNA from alignment at LSalAtl2s554:308537..314923+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008875-704722 ID=EMLSAT00000008875-704722|Name=EMLSAT00000008875|organism=Lepeophtheirus salmonis|type=mRNA|length=6387bp|location=Sequence derived from alignment at LSalAtl2s554:308537..314923+ (Lepeophtheirus salmonis)
GCCTCAAACATTTATAAATAGTAACCTATCCTTCATTGTGAGCCTCCAGT ACTAAAAGTTTGAGATCCAACTTATCTCTTTTCAAAACAAACAACACAAA TACTAATCTTCACAGATAAAAAACACAAATATATACACGAGTACATATAT TAAAATTGAAGAAGATATTGTAAGTGTCAAAAGGGAGTCAATCATTTTGT TAGTTCGTTACCGAATGCAGCATCACCAAAATGTCTTGGAAAGAGTGTGT CTTTCTCTTTGTGGCCGCGCTTTTCGTTGAAGGAGTCCGATCCTCCTCTT CCTATAACATATCATTCATTCAACCAGATCCAATTCGAATGGGAACAGAT GGGAATATAAGTCTGTGGGGTGAGTGTTATTACAATTGATATAAAAGATC TGTCCTTGTTCACAAGTAGGCCCACCAAAATAAAAAACTTCCGTTCATTA AATTAGCAAATAAGGAAATTACGTAAATATACTTATAATTTATTGATTTA ACCCCTAAAAAGAACAAAGCTATTTGTGAAAAAGAGGATTTTTTAAATGA GTCGGTTAAATAAGGAGGGGAAGTAAAGAATGAGTTATTCTTGGAGGAGG TGTGGGGGGGGGGGGGCTGAAGGATTTTCTTCTTCACTTGATGGATTGTA CATACATTCCTCATCTCCCATGTGAATTTCACAAAAAATAAATGTGTTTT TACATTTTTTAAAGTGAAAATACGAAACTGCTCTATATATTATATAAATA TGTATATTAGGGTGGTATGTGTTTTATACTTTTTTCGAATTTCGGCTATG ACTAAGCCGGAGAAGTTATGACATGCTGTGAAAATGATCTTTTTCAAATA GTTTTGTCCTACGAGGTCACCTTTAGGTCACGCATCTCGATCAAATTATG AAAAGAGACAAAAAATCTTTACTTAACAAATATAGGTACTAAAAAGACAN TTTTTAGTTACTTCCCATAAACAATTTTGATATGTATATTTTTTTAAACT ATGAAACATGTTTTAAAACTTTTTATTTCTGAAATGGTCTTATTGAGCAA AAAAAAGAGAAAAAAGTTTGGAAAATTTGATGATGAATACATCCTTTTTT TACATTTTTAGATTGGAAAGATCACAATTTTTTCCATGTTATTCTGTCTT TTTGATCTTAAGAAATGTTTTTTTATTATTATTATCATTAATTAGAGTAA TGTCTCTATTCTCAACTCTAGATTCTTCAATTAAAACTAATCATCTCATT TCTTAGTTGTCCTTCTACAAAATTGCAACTTGTACAAAACAATCCTACTC AAAGGAAAATAAATAATAAATTGAGATTTTCTCCTATTCTGTTTTTTTCT ACAAAATTGTTTTGATGTTAATGGCCTATATGTAAAAAATGGATTTGAGC CATGAAATGTCAAAACAGAGTATTCCAATTTTAGATTTTACCAAATTAAG ACCCTTTTCAATATCAGAATTAGGCATCCTAATTTGGCCTAAGTCAGGCT AAGAGGTGTGCCGTTCAGCTTCTCACTTTTGTGAATCTACAGAATAAAAG TATTCCAATATATACTCATGAGAACTAAATATATTTAGTACATCAGAATG TCATAGCTAATTGATGAAGTCAAATATCACGCAACAGGAGCATATGTATG TTCAGATATTGTGATAAAATTACACTTTAATCAATTGTATTTTCAAATTT TTCTGGGGGGGAGAAGCCCCCGATCCCCAATAGGCATAATTCATCGCTGA CTYCCCCCCTGGTTTGATTTTACAACTCGACCACTGTAGACATTTTTACC ATATAATGTTTCATTGAATACTTATATATTAGCAATTAAAATAATCAAAA ATGACAACATTGATCCTCCACGGAATATTCCAATATTGCAAAATCCTGAA CATCACTATAAAAACAAGCTAGACTGATTTTCTCAAAATTGAGTGATTAT TCTTATTGACCCTTTCAGTGCGTCATAAATGCCATATAAAGAACCCAAAA TTGATTGTCACAATAAAATAATGACAAATTGAGGAACGTTATGATTGAAA GGGGCCATGGGGGGGGGGGGGCCAATATAAGCCCCTTCAATCAAAAAAAG GTTTTAAATAATAGCCAAGAATTTTGGGTATCTTAACCCATACCACAAAT TTAAATATAAAGCCTAAAATTGACTCAAATATGTGTATAGAACATTGGGT TCCCATGTATAAATTATGGATTTTCTCCCGTTCTTAATTTAAATTCAAGA TTCGTTTTATGTTGACACAGCGTATATATATATTACAAATCTATTAATAT TTTAAAATTATAAATTGGATTCAGCATTCCTGTGGAGCAGTGGTCGGGAT TAGAGAAATTTTTGGGGTAATGGGAGTACAACTTCATATTGTTAAATAAA ATAAACAACATGCCACTATAGGAACTCCGCATGGGGTGGGCTGGAGGGGC TGTAGCACTTTCCCCTAAAAAAAGGAATTGTTGATTTTTACTAGAATTTT TTTTTGGTCAGGATAATAAAAAATGATTGCTTTTATGCGATGTATCACAC ATTTCTAATGTAATACTATAGGTAATTTAACTTCTCCAATATCGTCACTC TATCCACATTTCCCAACTTAAATCAAAAGCCTGATATATCTTTATTTCAG TCCAATATGACAGGACTGGTAAAACACCCCAGAGCCCAATTGAGGTCCAA TTAAACTTCACAAACCAACGCTCTTGGGCAATTGAATTCAATTCACCCCC TCTACTCATCTTTCAACCCCATGAAATACGGTCTAATCTGACTAAAAATA TTAGTCTCTCGAGTGTTGTCATTGGGATTCAGAACATTCAAATACAGTCA AAGCTCACATCTGATCCGGAAGGAACGCTCAAGACTCAAGATGAAACTAT TCAAGTAAGGGTCATTGTGGCCTCAAGGCTTCTGAATAACATTTTTGTTG GAGTTATTACAATCATGGTCCTTATAAACACCATTAATATGGGCGGTCAA TTGGATGTAGTGATCATCAAAGAAGTATTTCGTAAACCAATTGGTCCAGC TGTTGGATTCTTCTGCCAATTTGTGTTCATGCCTTTGGTGAGTGAACATT CATAATAACTATCCTTTGTATATATATATATATATATATAATAGTGTTGA GACTCGGTCCAGCACCGTTATTTTTTTTCTCGGTTCGGTCTTAAGTGATT GTTTCTTGACGTATTTGGACCGATTTTTCGGTCCAAACCGCGATCTCAGT CAGTGTACCGATTTTGTCTCACTTTGTAAACCGATTTTGATTTGATCTCA CTTTATAGACAGCTTTTTTTTTCAATCTCAGTTTATGGACAGTTATAAGA GACTTTTTTTTTCTAGATCAACTGTCATTCATTTTCTTCAAAAAAACATC AAAAGTACATCATAACTTATTGAACAAATACTGTATACATATAAGAGACA GCGGGATCAAAATTAATCTTAGCTATCTCTCTTTAAACTTATTATAACAT CATTGTAATTTGAAAAAACATATGATGTCATGTTATAAACAAGTTATCTG TAAAATTGGTCTAGATCGATTTTTTTGGGACCGAACTAGACCGAATTTTT CCTTTGGACTGATCCAGACCAAATTTTTATATAAGACCGGTCCAGACCGA GCTTTTTTTTGCACCAAACTAATTCGGTCCAATAAAAAATATAACAGTCT CAGKCCGGTCTAGGATTTCCAAGCCGAAACCCAACACTAATATAAATATA TATCTTTTTTTTTTAAAGCTTTCCTATGGCGTTGGTTGCGTTATGTTTGA TGATAAACTCTTTCGATTCGGTCTCTTTATCCTTGGAACATGTCCGGGAG GAACGGGATCCAACTTTTGGTGTATTCTCTTGGGAGGGGATCTGAATTTA TCCATTACCATGACTTTTATAAGCACATTGGCAGCTATGGGGATGATGCC TTTCTGGGTGGCCATGTTGGGGCCATATCTTGTTGAAGGAACGATTAGTA TACCCTATCAGCAAATCATCATCACTCTTCTCTCGTAATTAATTACCTTG TTCTCATTTTTAATTTGAATAATATATTGTAATAAGTATAGATTGATTAT CCCTGTGGTAATTGGCATGCTGATTCGCTACAAGTCAAAGCGAGCCGGAC AAATCATGGCTAAAGTCATTGTTCCCTTCACAATAATCTTGGTTTCCTTC ATTTTTACGGTGAGCCAGAAATCTTGGAAATGCAAGGGTCCACAGGTTGT GTGCTGGAGGGGCTAAAATTTATTATTTTGCGAATAGCTATAGATTTTTG TACTTTTTTTCCAAAAAGTTTTATATTTGAAATTCAATTTTGGATATTTT TTTTCCAAAAAGTCTAATTTTTGAAATAGTTTTCCAATAAAATGATATCG TAAAAAATAGCTGTGGATTTTAGAATTTTTTTTTTGAAAAAATTTAATTA TTGAAATTATTTTCGGAAAACGTTAATTTTTTGTGAATAGCTGAGGATTT ATGAAATTTTTTTCTAAAAATTCAATATTTTTCAATTTTTTTCAGCAAAA TGTAATTTTTTAATTAAAATAAAAAATTATTAATTCAATTTTTCAATTTT TTTTAACAAAAAATTTAATTTTTCAAATATTTAAAAAACAAAACTCAAAA AAATCCAAAAACCAACCCCTCCCAAAATATTACCCTGAGGACAACCCAGC AATGTTACATAATTATTAATAATTTAATTGTTGCTCCCATAGTTTGGAAC TTGGATGAATTGGTTTATATTTCAACTTTTTACAGGACATTTGGTCGCAG CTGGATTCATAGTAGCCATTTCAGGCTACATATTGGGAGCAGGATTTGCT TGGCTCTTTCGGTAAGTTAATGATCCCGTAAGGATTCCTTTAATCTTTTA ACATATTTTTGAATAATTATAGTCTCAAACTACCTCAAATCATCGCAGTG TCTATTGAAACTACGTTTCAAAATGCAGGAATTGCTTTTGTTCTCCTCAA AATATCCTTGGAAGAGCCCTATGGAGATCTTGCCTCAGTAGCACCTATTG CCCAGCTTATGTTAACAGGTAATTCCTCCTCAGTGACGTAAGGGAGTGCA ACCCCAAAATATTACTATTATTATTTTGATATCCTTTTTTGAGGAGGGGG GGGGGGGATTGGTTTTAGAATTTATTTTTTTAAATCCTAAATTAACATTT TTCGGAGAAAAATATTAAACATTAAATGTTCTTGTAAAAATTAAAAAATT ACAATTTTAGGAGAAATTCAAAAATCCTTGGGCTATTCAAATAGAATTAA TTTTTTTGGAAATAAATATCAAATATTTACCGCAGTTCACAAAAAATTAA ATTTTTGAAGACAAAATTTCAATTATTGAATTTTTTGAAAACAAAATTTC AATTATTAAATTTTTGGACGACAATATTTCAATTATTAAATGTTTTGAAG AAAAAAAATACGAAATAATAAACTTTTTGGGAGAAAAATTCTAGTGTTTC CTATTCCTATTTGAAAAATTATATATTACATTTTTTGAAAACATATTTCA AATAATAATTTTTTTCCAAACAAATGTCAAATACTATTTTTTTTTTTTTT TGTCAAACAAATTTCAAATATTTTACTTTTTAGTAAAAAACAAACATTCC TTAATTTAGGGGTCTACAACGCCTCCAATCCATCCCTTGCGGAACCCCCA GATGAAGGGGATTAATACTTAAGCACTTGTCCTGATTTATCTTGCGTACA GGGGGGGATAATCTCAGTTACGCCAATACCATTAATCATTTACATCCTCT TCTATATCATTGTTTTGATGTTTCTAGGTGCACCGCTCTGGCTTGTATTA CTGTGTAAGAAAATCTATGATAAATGTTGTAAAAAGGAAGAGGCTGAACA TGAAAGAGTCCCTGTTGAGGATCCTCACAATGAGAAAGGAAAGCATGATC AAAGTATCATTTTTAAACCCTCTAACAAAGGAACTTCTCCAGCATAGTCT TACGTAGATCTCAAATATAAACAATATAGGTACATATTACGACAAGGACT ACAAGAGATGGAGATAGAATTGAGTACGCTGTTGACTGTAGTCCTTTTTA CTTCCTTCCTCATTATTATTTGTGACGTCATCAAAGTGAAGCAATAACCC ATCGTTACCTTTATTGAATCACTCAACCTTTTCTCCAAAAAGGAAGAGAA AAAAGGCCCGAAATCATCTGGTAGTTAGCCAACAAATGCTATATATCTCA TTTGTACTCATATTATTACTTCACCATTTTGAAAATGAATTACATATATA TATATATTTCGTAATATATAAATCTAATTAGTATTTTATTCAATACTGTA TTATAATATTGCTTATTAATATTCTATTAAAAGTGAA
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