EMLSAT00000008902, EMLSAT00000008902-704749 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008902
Unique NameEMLSAT00000008902-704749
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: developmental defect, Molting, no molting
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
beta FTZ-F1 beta FTZ-F1 both
  1. Nauplius
  2. Copepodid
Developmental arrest
developmental defect, Molting, no molting
17.01.2018 - 13:00
24.01.2018 - 13:00
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s554supercontigLSalAtl2s554:572309..581835 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008902 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008902EMLSAG00000008902-691668Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000039551EMLSAE00000039551-748479Lepeophtheirus salmonisexon
EMLSAE00000039552EMLSAE00000039552-748480Lepeophtheirus salmonisexon
EMLSAE00000039553EMLSAE00000039553-748481Lepeophtheirus salmonisexon
EMLSAE00000039554EMLSAE00000039554-748482Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778663auto778663Lepeophtheirus salmonispolypeptide
EMLSAP00000008902EMLSAP00000008902Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008902

>EMLSAP00000008902 ID=EMLSAP00000008902|Name=EMLSAP00000008902|organism=Lepeophtheirus salmonis|type=polypeptide|length=540bp
MLPTEPLISIPYSNQRGRFHQPHIQXLPLAAPGSNHRSSSLILIKKEPNM
STSGSLSSGGSPPMVGGTLLPTMDMPIGNSFASLEDLSSVVHPLGLGGGG
PGSGGNPVDSGSNNSPPTLSYSTSPTHNMLGLLPDNNSCNLFNPSAGLPT
ASSNNNSAGSTSGDFGPGVVGQSDQPDSKDGMEELCPVCGDKVSGYHYGL
LTCESCKGFFKRTVQNKKVYTCVADRSCVIDKTQRKRCPYCRFQKCLDVG
MKLEAVRHDRMRGGRNKFGPMYKRDRARKLQVLRQRQVIHGGVSMGPSSM
NNTXTTTSSSASYGGGASGGMNSTXSPPSMNNNNNNNSPSIYGSPITHIK
QEIQIPQVTSMTSSPDTSPSPVHLPGMISNPGGNPMGGDTPGSNPIIAQQ
TDPAGGIQWQINAAGKHQDIQSNQGTGKMPAIIREFLASLDDREWQSELY
KLLQSQSFNQVEVDLFELLCKVLDHNLFAQVDWARNSYYFRELKIYIYFI
SVFLILSFLFFLPLEVRNLNNRTHVQECHEQVHRILLEYC
back to top

mRNA from alignment at LSalAtl2s554:572309..581835+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008902-704749 ID=EMLSAT00000008902-704749|Name=EMLSAT00000008902|organism=Lepeophtheirus salmonis|type=mRNA|length=9527bp|location=Sequence derived from alignment at LSalAtl2s554:572309..581835+ (Lepeophtheirus salmonis)
CTGTGAACTCCCGTTTTTTTCATTTTATTTTTTTTAGTTATATGCTATTC TATCGATCTACTGCTGCTGATAGTAGACTTTTTGTACATACAAACAATTC GTTAGAGATTCGTGCAGATTTTTTTTTTGACTTGAAGGAAGATCCACAAA TATTTATTTATTACAACATATATTTAAAAAAGAAAAAAAGAGAAAAGAAA CGGAGAAACAGAGAAGGGAATAAATAAAGTAATTTTGACCTAGATATCGG TGTGTTTAACTCAATTTGATACTACTCTGATTATTATTGAATCTATCATG AAGTACGAAGTGAGACCCTAACTTATTTAATATATCTGCTGCGTCTTCTG CTATTACTTCAAGAACAACAACATCTTCAAACCGGTGAAGGAAACTCTAC ATATAAGAACGAAATCCACATTTTGTTAATTGAGGACAACAACGACGACT CTACTATACTCATTAGCTATACATTGTGTGGATTTCGAAAAGAGACGCGG ACGATAAGGAGCAGGGAATTTGTGATTTCGAAAAAAAAATAGTAAAAATG TGCCATGGTGGTTTGAGATGACCAAATACATTTATAAGGGCAAGTTACGT GAAAAAGGCCCTTGAATGTTACCCACGGAACCTCTTATTAGTATTCCGTA TTCTAACCAACGTGGACGTTTCCATCAACCCCATATTCAAGASCTGCCTC TCGCAGCCCCGGGTTCTAATCATAGATCATCATCCCTGATCCTTATAAAA AAAGAGCCGAATATGAGCACAAGTGGAAGCTTGAGTAGCGGTGGTAGTCC TCCCATGGTTGGAGGAACACTCCTCCCAACCATGGATATGCCGATCGGAA ACTCATTTGCTTCCTTGGAAGACCTGAGCAGTGTAGTCCATCCACTCGGC CTCGGAGGGGGTGGACCTGGGTCAGGAGGAAATCCTGTTGACTCCGGCTC TAATAACTCTCCCCCAACATTGTCGTATTCCACAAGTCCTACACACAACA TGCTAGGCCTCCTACCTGATAATAATTCCTGCAACCTTTTTAACCCTTCA GCAGGACTACCAACAGCATCCAGTAACAACAACTCCGCTGGATCCACATC CGGAGACTTCGGTCCTGGAGTTGTGGGTCAATCCGATCAACCGGATTCTA AAGACGGTATGGAAGAATTGTGCCCTGTTTGCGGGGATAAAGTCTCAGGA TATCACTATGGACTCCTCACCTGTGAGTCCTGTAAAGGATTCTTCAAACG AACGGTTCAGAATAAAAAAGTTTATACTTGCGTTGCGGATCGAAGCTGTG TCATCGATAAAACGCAACGGAAAAGATGCCCTTACTGCCGCTTTCAAAAG TGCTTAGATGTTGGAATGAAACTCGAAGGTAAGAAAAACTTCTTCTTCTT TTCTTTTTTTGAAAATATATTATGCTCTGATTTAAACATTATAACCAACC ATTTATTTGAATCAAAGTCTTCAATTCTTTGATCCTTGGTGTTTTTTTGT TTTTTTTGCTTGTTTTTCTTTTCTCTTCCCTTCCTATTTTTTTTCTATCA AAGAAGCAGAATCCCCCAAACGAGATCCATCTCAAAAGATTTACTAATAA GTGAACCTTTCTTAATCATGACTCATCCAAGCACACCAATAACCGGATAT TAAAATTCCACCATCTCTTTTTCCCTCTCTCCTCCTCCTCCTCCTGTTTC AAGTATGTCATGACGGATTTATAACGTTAGAAATATATCCTTTTCTCCTT TGTTAAAACTACTACTTCTTTGAGTCTATATACCTTAAGAAACAGTCCAT TGCGGAGAGAACTTTTTTTTTACTTGCATTGTGGTGTATATATATATATA TATAATTTCAGTACAGAAATATCATTGAGTAATTAGTTTCTTTTTATATA AAAAATCAAAATAGGGAATTAACTTCCAACTTTGGAGGGGTAGGTCACTT TAGGGGATGACCCAGAAAGAAGAAAATGATGATGCATTCAGGGTGGGTTT TTTTAAAGGTCGTTGCACTTTTTATGATGATTTTTATTATTTTCTACTGT AACAAAAAAAAAAACACACATTAAAAAACGTTTTTTCTTTTTAAAGAAAA AAAAAAAACGATCCAAAACCTTCCCCTGCTTCCTCCACCCCAAAATAGCT TGGAGAAAATTGTATTTTCTTTTTCTTCTTGGGTAGCTTGGTTTTTTATT ATTTTTCTTCCTTTAAATGACCCAAATTTTTAAAGGGAAGAACGACGAAG ACCTAGGGGGAAGGGGGAAAAAAAAGCATTATTCCACACATATATATAGC GTCAGTAGTATTTAAAGAAAGAAAAAAAGAACAAAGTCATGGTGAAAATC CTGGTGCAAGCCTTATTATATTTTTTCCCCGATTTTCAATTCATACAAAG AAATGGTTTTTTCCTTTTTTTCCCCTTCTTCCCAGTTACATATCCGCTTT GAAGCGCAAAAACGTGGAGTGTTTTTATTCATTAAATAATTTTTATTATT TAATCCAAATTCTTAATTATTTACAAATGAAAAACACCTATTAAGKAAGG CCCAAGAAAGCGGTGCTTAAGGTATATATTCTATACCCCCCCCCCATTTT GAAAGTATATAGGGGTCAAGGACGTTAGGGTGCAATTTTGGCGGGAATAG GGATGCTTATTTATTCAATGGATTCTTCTACTTTTTTTCCCGGGATGTTT GTCCTATTTCTTCTCCTTTATTGTTATGTCGTTGAGAATTGTTGCTTTTT TTCCCTGCTTTATATATTTAAGAAGAGGGGTGGGTGAGGGGTATGTAGTA ATAATAGGGGGGGGGGTATGAGGAAAGTAGAGCAGTCAATAGCACCACTT TTTGGGGGGGAGGGGGTAGACGAAGAAGAAGCACTTTACACAACGGCCTT GAAGGGAAAATATATATGTAGTAGGAGAGGAGGATGAGGTGGTGCATTAA TAGTACAAGTATGACTTACTAATAAGTCAGTCATAACTCACTCACTCACT CACTCATGTAAAGGAATTATTCTCATTGCACTAAGGCATATGCAATAGTT TTTAGGGGTGGGGTGGGGGGTTGAAAGCTCTCGAGTCATTATGAACCCCA GATTTGAGGACATGATTCGGCCCTAACTAATTGTCCATTGTATTCGACTC AAATGACTATTGCAAAAATAGCTATTTATCGTTACCATGTGCGACGACTC CTGCTGATGGTGGTGAGTTGGATAGAAAATATAAAAAAAAACGCGACCAA AAATAGAGAATAATAAAGTAGAGACGATGAGGACTACACGAAGAAGAAGC AGAGTTATTATACAAATAATAAAAAAATACGAAAAATAAAAGTGAAAGTA TAACTTACATACATAAAATAACTAAGTGTATATATTTATATATATATATT TTACGCCAAAATCCGAGCGCTCCCTCTTTTAATTTCTTCTGCTTATGAAA TCTCGTCTGTTAGGAGCGCGCCCTCCTTTTTTTTACATATATATATAAAT ATTATTTTATTCCCCTTCTTCGTCGTCTTTAGTATGTTTTAGAAACTAGG CCAAGGACGATTATGGGCCTACTCCTGATTGCAAATGAAGGAAGGAAATA ATATAATACGAGGGAATCCTCATATTATTGATATTCATAGATATATATAT ATATATAAATATCTTTGACAATAGTAGTATTTCTTGAGTTGGGTGGACGG AAATTGGGGTCAATGGTAGTATAGAGTTCTGCTGTCCCTATGGGCTATCT CTTACGACCCCTCTCTCATAGTCATCACTACTATGTACCTCCTCTCAAGT AATAAAATAAAATAAAAAACACTCACAAAAGAGAGGGATGAAAACAATGG GATATCCCAAGGTCATTGTAGGAAAAGAGAGAATAGGTCGTCGACCAACC CTAGGATTCAAGTGGTAGTAGTAGTAGTAGTAGTAATACTCAACCCTCCT CCACTTACAAAAGAAGACACAGAGAGAAAAGAGATTGACCTGAAAAGCAC AGGTTATCATCATCATCCTATTAGTTACTACATACTATCGTCATCCTCTT TCTTTCTGATGTCTCTTCATCTTATCTTTATACTACTAAGGGTGTATTTG AGCGATGCTATGACCTTCAATTCAACAAAGTTTCCTTTTTGTCTGTACAT ATATATATATATAGTYTGGGGGGGGGGGGKGATCTTGCGATTTCAGAGAG TGTATCCATATCAATTTGTATGCCTTCTTAATAAAGATATGATAGAACGA TGATATTTTTTTGTACATATGTAAGTAATGTAGGGAGATTTGTTTGCATG TCAAGTAGGACAGAAAGTAGATGATGGTTTAATAGATTTGAAATTAATCT TTATATATATATTTTTCAGCCGTTCGTCATGATCGAATGCGCGGAGGGAG GAACAAATTCGGGCCCATGTACAAACGTGATAGGGCACGGAAACTGCAAG TCTTGCGTCAAAGACAAGTGATACACGGTGGAGTTTCCATGGGCCCAAGT AGCATGAATAATACGMCAACCACAACGAGTAGTAGTGCATCCTACGGCGG CGGKGCCTCCGGTGGAATGAACTCCACGAGKAGCCCTCCATCCATGAACA ATAATAATAATAACAATTCCCCCTCAATCTACGGCTCACCCATCACTCAT ATTAAACAAGAGATACAAATACCACAAGTCACATCTATGACGTCTTCACC AGATACTTCACCCTCTCCCGTTCATTTACCCGGAATGATTTCTAATCCTG GAGGCAATCCAATGGGTGGAGATACTCCGGGCTCCAATCCCATCATTGCC CAACAGACTGATCCTGCCGGAGGTATTCAATGGCAGATCAATGCTGCTGG AAAGGTTTGTCATAAATACTCAATCAAAACAACACTCTATCATCATCTTC TTACTTTTCAGCATCAGGATATCCAAAGTAATCAAGGAACTGGGAAAATG CCAGCCATCATTCGAGAATTCCTTGCCTCCCTGGATGATCGGGAGTGGCA ATCCGAGTTATATAAATTACTACAGTCTCAGTCTTTTAACCAAGTAGAAG TTGACCTATTCGAATTGTTGTGTAAAGTTCTTGATCATAATCTCTTTGCT CAAGTGGATTGGGCTAGAAATTCATACTACTTCAGAGAACTCAAGGTATG AATAGAATCTTTATTTTTTTCACTCTTAAATTACCCCTCATTAGCTTTTA ATTATTAGAAGGAAATTCTTCTTACTCTGCAACCTCCTCTCCTTGCTCCT TGCTCCTTTATTCTTTAAACAATAAAATAGGGGAAAATATAATAATTATT AATGATGAATTATTCAAAATATATGTACACTACTTAGTTCTGTAGTGTAT ATAATATATATATATACNATTTTCTTGTCTCGACGTCTCCTTTTTTTCAC GATTTTTTTAAAAAGAAAAATTCTTCTTCTGAAATTAGTATTTTTTCACA AGGCCGTCTAGTATTCCTTCTATGTTTGGATTTTTTAATAATTTTATTTG CTTGCTCAGCTATTATTATTATTAATGATTTGATTGTTATTATTTTTTAA CAATAAAATACAATTTCAAGTATTTGAAGAGAAATTGAATAGCGGGAGAA GGAAAATTATATATATATATACATATATATATTTCTTCATTTACATCAAA TGAATCCTCATGGATTTTTCTCCCTTTGTACACAAACTAAATAATCACAC ATGATTATTTTTTTTAGTTGCCAAGTCAATTATTTTTGTACACATGGACT TACCATTAATAGTATTCTTACGTATTTCCCACCACCATCAACCTCATCTA CTTTCACCATGTGTGCTTCGAAGAGTGGCAGSRGCGCCYACTCTTTTYCT TCTTTYAAGCAAGTCATCTGGGKCATTGTCAAAAGAAAGAGCGCGCACTC TTTCTCTTTATGTGTATAATACCTATTATAGAAAGAATGAGATAGTTAAC GCGCGTGCATGCGCGCGCGCGTTAACTATCTACTTTCGCCAGGTACTAAT ATAAACGACGTAAAGTATGTACGATGATGATCATCACGGTGATGAGTATT CGTAGTACGGTGATTATGATGAGAGATATTCGTTCGTATTCCTCACTTAG TCTCTACTTTCGCTTTTTCTTAATACCATCATGGCCATATTGCGATATGT ATTACATACCTAGAAGATATTATATCTTGATGGCAGGRGCAGATTTTCCT TCTTTCTATATTTATTTTMCCTTCGTCTTGCTTAATATTCATTTCCCCCC TCCCCCCCCCTCTTCTTTTTTCCGAAACAAAAGGGTTATTTTGAAATATA TACTACAAAAGCGTAAAGGGATTTCGCAATATTTCTTTTCTAATTTTTTA TTTTTTTTTAAATGAACGACCTCGACGTGAAACCTTTTTATTTTATTTTT TGAATGATCATACATACATATACATATAATAATAACACTATGAACCCCTC TAATATTTTTCAAATATTTATTTTAAATATGAAAGGAACAAAATACGTCA CTTCTCCTCCTGCTGGGAGTTTAGTGTTATTAAGAGTCGTTCTCATAGAT TTGAGTAGTACATTATAGTAGTGTTTTATTTGTTTGACATAAATAAATAT ATCAAATCGACCACTCTGTTGACATTGACACACTTATCCTAATTAGAACA CACACTCATCTGCTACTGCTGATGGCGGCTTCCCTCCCAATATATATATA TAAGCTGTAGTTGTGGAGGTTCTTGATGATGTAAGGAACGTGTTATGACT TATGATTGATTCTCCCTCCCCTCTTTCTCTTTATAGAAAAGAAAAGTATT CGTCGTTGTCATAGCACACACAATATCTTTTGTTTGTTTTACTACTACGA ACGAAAAGGATGAGAAACAGAGTGTGGGAGAGACTGTAAAAATCGTCATT ATGATAATAATTGGAGAAATGACCTACTTTTAATAGCTTATCATCATATC ATTGTGTTTCTTAGTAGCTGCATTAATATGTTATTCATTATAGATATCAT TATAATATTTTCAATAACATGCAAAACTGTGCTTGCTGACCTCCTTTCTT TCCTCTCGCTTTTATAACACACTCTTGACCTATATATACATATTTGTCTT GGAAACAATCAAACATGATTAAGAGTGGAGTTGATTGCTGTTTGGAATGA AAGAACATACTAAAAGTGTTCAGCGCCAGTTTACTTTAATTAGTAGTGGG GATGTAAGCTACTTTCAATTTCAATATAAATTACATGCAGATATATATAT GATTCTATTCCAAGTAGCAGTCTCACCATTGCTTACCTCCCCCCCCCCCC CTTTAAATGTATGTGATGAAAGGAGAAAGCAGTAGGAGAGGGCAGTGTTG TAATATTATTTAGTGAAAGTAATATGTTTAGTAGAGAGAGAGAGAGATCT AACTGTTAAACAAAAGTGTTCAAAGATGGAGCTACTACTCGATTGCAATG ACCTACTTTTCGGGGTTCTCTCATATTTGTTGTATGTATATCATTTTCCC CCTTGTTTCACTTTCGTTAGTTGGAGTACTAATAAGAATATATATGTTTT ACAAAGAGCCTGCTTTCTTTCCCCTACTTTGCTAATCAATTGAAAATAAA CTTACAGACTACAACTATATTGAATAGTTATATGTTCATTCAAATCACCT CAAATCGATTTCAACACCTCAAAAATGCATTTAATTGCTTTTTGCATCTG TATGTCATTGTACAAACTACTTCAAAGTTGTAGATGAAATCCCCACCAGG GGGATTCCTGTTGTTTTTGTCAATAAGAAAAAGTTATTTTCTATTTTCGA ATTCGTTTTTTAAATGTATTTTATTAAGTTTGCGGAGAGGACCACTACGG TCGTGTCCGCAAGAATGTTGCTACTCTTGATTTGTTTTTGACAGATGGGA TGTTCTGTCAGTACAGTCTTATGACCGGTACTTGGGAGGACTGTCTGTAT TATTTTTAGAAAGGATATGCAAGACTGAATTGGAGTGAACTGTAGTAGGT AGGACGTCTTTTGGTATTTAAGTAAATGGTCAGAATAAATCAATTGCCCG TAAAGCTTTTGGAAGGGTGTTGTACTTCATAATGGAGAATTTAGGTACAC ATAACTATTTTAGCAGTTTAAACAATGTTTGTAAAGTATATCAAGAATGT TCCTTTACATTTTTCACCATCAAAAAAAGAAACAACAACAACAAAACGTC ATAGCTTCATATCTGTCCAAAACAAACTACCAACGAGGGATATTTGTGGA CATTGCCACAAAAAAATTAATTAAATTTCAAATATTTCATTTTCTAGTAA GAGTACAAAATTATTTCATTTTATTGGGGGGAGGCTACAGCCCCTGCGGA CCCCAATGGTTAAGCCCCTTAAGATGATGAAGCGGGAATATAATACTTAT TAAAGAATATGTATTCCTTGTCTCTCGACTTCCTTTCTTGTATGTTATAT ACATCTATATTTAGGTCACTAGGTCTTGACGAATAGAGAGAGACAAGGCA GATTGGCGGRTTTGGTGCCTTCCCTTGGCGTGGGCCTCTTTCTCTCTTCC CACTCCACCTTTTTCTTCTCCGTACATTCTTATACATAACATATTTTGAA GGAATGTTTAAGATACTCTCAAACAGCTAGTTCCCTCAATCCCTTCTTAT CATATTTAATTGAGAGGGATGATTCATTAATTATGTTTGTATTCAACTAT TCAAATTATGTTTGTATATTAAAGGGGGTTATTATTATTTATATATCTAC ACTTTAAATGTTTAGTACATTTGCTATTGAGGAGGTAAGCCGCTCGCTTT TCAAATTAAGATATGTATATTATGTGTATAGAATATACATCTCATCGCTC CCAAATTGATCTTGACCTAGTTTTTTTGTTTTTGTTTTTTTCATACTTCA TTTTGTATGAATGTCCTCGTCTATTTTCAAGTTACTTTCGCAATACTTAC TTTCAGGGGCGTCCGCAGGATAATATTTTTTTGGGGAGCTTGGTTTTCGG AAATTAAATTTTCTGAAGAAAATGACATATAATTTTTTAGTGTAGGCTGT GTAGGTGTAGTGTGGATACAACCTCAAAAATGTATATTGAATTAAATATA ATATGTACTATATATTTATTTGTAGGTGGATGATCAAATGAAACTCCTTC AGAATTCATGGTCGGAAATGTTGATATTAGATCAAATTCATCAGAGAATG CACAATCACCTACCGGACGAAACACCATTACCCAATGGGCAAAAATTCGA ACTTCTTTCATTGGCCCTCTTGGGTGTACCATCCATGTCCGACTCCTTCC AAGAAATTACCAATAAATTACAATCTTTAAAATTTGATAGTGCAGACTAT GTCTGCTTAAAATTCGTACTTTTGTTAAACCCTGGTAAGATTTATATATA CTTTATAAGTGTTTTTCTTATATTATCATTCTTATTTTTCCTCCCTCTAG AAGTACGAAATTTGAACAATCGTACTCATGTTCAAGAATGTCATGAACAA GTCCATCGAATACTATTAGAATACTGT
back to top
Add to Basket