EMLSAT00000009200, EMLSAT00000009200-705047 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000009200
Unique Name	EMLSAT00000009200-705047
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s584	supercontig	LSalAtl2s584:566827..573423 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000009200 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000009200	EMLSAG00000009200-691966	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000040806	EMLSAE00000040806-749734	Lepeophtheirus salmonis	exon
EMLSAE00000040807	EMLSAE00000040807-749735	Lepeophtheirus salmonis	exon
EMLSAE00000040808	EMLSAE00000040808-749736	Lepeophtheirus salmonis	exon
EMLSAE00000040809	EMLSAE00000040809-749737	Lepeophtheirus salmonis	exon
EMLSAE00000040810	EMLSAE00000040810-749738	Lepeophtheirus salmonis	exon
EMLSAE00000040811	EMLSAE00000040811-749739	Lepeophtheirus salmonis	exon
EMLSAE00000040812	EMLSAE00000040812-749740	Lepeophtheirus salmonis	exon
EMLSAE00000040813	EMLSAE00000040813-749741	Lepeophtheirus salmonis	exon
EMLSAE00000040814	EMLSAE00000040814-749742	Lepeophtheirus salmonis	exon
EMLSAE00000040815	EMLSAE00000040815-749743	Lepeophtheirus salmonis	exon
EMLSAE00000040816	EMLSAE00000040816-749744	Lepeophtheirus salmonis	exon
EMLSAE00000040817	EMLSAE00000040817-749745	Lepeophtheirus salmonis	exon
EMLSAE00000040818	EMLSAE00000040818-749746	Lepeophtheirus salmonis	exon
EMLSAE00000040819	EMLSAE00000040819-749747	Lepeophtheirus salmonis	exon
EMLSAE00000040820	EMLSAE00000040820-749748	Lepeophtheirus salmonis	exon
EMLSAE00000040821	EMLSAE00000040821-749749	Lepeophtheirus salmonis	exon
EMLSAE00000040822	EMLSAE00000040822-749750	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto778629	auto778629	Lepeophtheirus salmonis	polypeptide
EMLSAP00000009200	EMLSAP00000009200	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s584:566827..573423-

protein sequence of EMLSAP00000009200

>EMLSAP00000009200 ID=EMLSAP00000009200|Name=EMLSAP00000009200|organism=Lepeophtheirus salmonis|type=polypeptide|length=1680bp
RRRNTWLHCIVGIIINSLIATTNAQCFGGIETYEKTSGRKMNCPNFSCKT
RGLLSQPDTSVTRDCINICKQSSSCKAFSVDYKSSRCTSYXRDSTLKGRR
QLQPATAINYYEKICLRGVRKEEFDGICNAERGWTFERILDSSLKGFDDK
IETGVESKSECARLCLLNQKFLCRSAEYEGASQRCVLSREDRRTQKDAFQ
VGGTQGIDYIENQCAKPLTDCSYSSANNGFAVISMDDVLFSRTVSDCQRF
CDDARAFQCRSFSQKNDRCYLSGDDSGTLPGIPKPVDPGSVYKEKFALKE
IQLYYFIGTCEGGIFTYEKTTGHFLRTAKEEPLFPDTSTPGITEKCSELC
TGLDSDCPSFSLDYSGQRCFKLDRNTQIRGDSLAPRDGTNYFEKICLKGF
DVRNRCQNKVWAFERVPGKMLDVDPDQIYENISLRRGCEELCLREREFIC
RSANYDSITLKCTLSRYDRRMLGTEYKNTSKYSNYLENNCIEPNQITCPY
MKIENAYPRYLDEVVRNIKDEVACEVQCSFNEKIICRSFAFYSXASQCFI
SGDDIISASEGALQTRPGTDYFQRKCKEGLSHRDNQIDSFPSGSEEIQTT
RFDMDFDRNRRPTSATGAMNKRKGKSEERYCSFGRLTYEKTTGYELIRGN
PTRLYSERDGGIIEQCASRCDEDADCKGFNMDYNRNECQSLTANSLNNLF
NLRTSSGVSYFETTCSGCGLLWTYERFVNKELKVDPKKIQRDVSKNECED
LCLSESSFVCKSANYDHVRRDCFLLNVDRFEIDQSLQSKQGVDYLENQCE
AIKRRGCDYGPQTKDRYLIYTDKVVKVFSDASCREACSSERSFYCRSYTF
LSESRPGRPQCLLSGDNGASSGGDNAFQLSNGALFSELDCSEGFTRPLMN
ENRRPIEVGSNPDNTFVTSGGAFGSTTSNSKSNPNPENCRSVGLSTSFEK
VMDFTYDRGPEEEFSTSVDIGIIVQCLRECQSRGRLCLAATLRNERGGRQ
SCYGLGNSATXXGXXPVXATGVTYFEKICVNRNCRKSWAFTKIPQYEFIG
SPNKEVQDVESISDCRNLCLDISSFSCRSMTYNRNTRMCRMTEETRRSSP
SEFRPAERGVDYYENECSKIPSNCEYVDNTGMYLPFTDTYISRVSDIEEC
RSQCSIQDNYNCRSFNFNSFRKECFLSSDDSVSLPSGLHQDRDFTFSERG
GCNNGTKNHVKKDVKVECTPSDMLVNLAFGAEFNGRIYATGNPQACFELG
TGQSEMILKIPISSQCGTVQQNPGRYVNHVVIQENPVIMQDTDKTVRVEC
AFTAEDQTVSFRPTAGVGGRLESGGGISVTVPFQPTGTNIVTNTAPTPGV
RMRVIRRNGETASMVGLGENLQLRIEIDRDSAFGLFARKLEAKTDNGELM
NLIDEDGCPINEIIFPALELEGGTRALYANFKAFRFPSTPIVNFIATVQF
CQDLCKPMPCSGGSESFGKRRKRSTQDENNKEERSFFPITDEAEGHSVQP
RTSNSFANDSSNVQESKKRKTKEDLLPEHIDLGLRLTVGENVLHKPFLPS
RHGGGVFPEFPGESQRDSNSQYYPSSSSSVSEVNTEEAEYLCSSQSTVIV
AIFVILVFNVLLTAGFILFYRRKRKEWIKGSNNAGPALPPRPSGSVIFKN
GRASSGSSGFALTTRQQQRMNSSMSSLPRN

mRNA from alignment at LSalAtl2s584:566827..573423-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000009200-705047 ID=EMLSAT00000009200-705047|Name=EMLSAT00000009200|organism=Lepeophtheirus salmonis|type=mRNA|length=6597bp|location=Sequence derived from alignment at LSalAtl2s584:566827..573423- (Lepeophtheirus salmonis)
AGACGTCGAAACACCTGGCTTCATTGTATAGTTGGAATAATCATCAATTC
ATTAATAGCAACAACAAATGCACAATGCTTTGGAGGAATAGAAACTTACG
AAAAGACGTCAGGAAGGAAGATGAATTGTCCCAATTTTTCTTGCAAGACG
AGAGGTCTCTTATCGCAGCCTGATACTTCAGTGACGAGGGATTGTATCAA
TATTTGCAAGCAATCCTCTTCTTGTAAGGCCTTCTCAGTGGGTAAGTTGA
GGTCCTTGACATAAAATCCGTATCTAGTCTACCTTTTTGAGCAGATTATA
AGAGTAGTCGATGCACGAGCTACGKCAGAGACTCCACTTTAAAGGGAAGA
AGACAGCTCCAACCTGCAACGGCTATTAACTATTATGAGAAGATTTGTCT
CCGTGGAGGTGAGAGAAGAGATTCTTAAGTCTTAACGTGTTAAATACCAT
GACTTGTAATCCCATTCCTTTCTATTTATTTCCCAGTCCGAAAAGAGGAA
TTTGATGGGATTTGCAACGCGGAGAGGGGCTGGACTTTCGAACGGATATT
GGACAGTTCCTTGAAGGGTTTTGATGACAAAATAGAAACTGGAGTGGAGT
CCAAGAGTGAATGCGCCCGCCTTTGCCTTCTGAACCAAAAATTCCTTTGT
CGCTCTGCCGAGTATGAAGGTGCAAGTCAAAGATGCGTCCTGAGCCGAGA
GGACAGACGCACTCAAAAAGATGCTTTTCAAGTAGGAGGAACTCAAGGGA
TTGACTACATAGAAAATCAATGTGCAAAGCGTAAGATATTTCACGTTTGG
ATCTCCTGCATTGTTTTTTTATTTGTCTCCTTTCTGGCTATTATAATTAA
TTAGCTTCTTTATTAATTTTTGCAGCTCTCACGGACTGTTCCTACTCAAG
TGCCAATAATGGGTTTGCTGTCATATCCATGGATGACGTTTTATTCTCTC
GAACCGTATCTGATTGTCAAAGATTCTGTGATGACGCGCGTGCGTTTCAG
TGTAGAAGCTTTTCTCAGAAAAACGACCGATGTTATTTAAGTGGAGATGA
TTCTGGAACTCTTCCAGGGATTCCCAAGCCTGTTGATCCTGGATCTGTTT
ATAAAGAAAAATTTGCTCTAAAAGTAAGTGTTTTACATACTCAAGCATTT
GAGAGGCCTACATCTTTGATCCATTAGACTGCTGCTATGGCTCTTTCATC
TACTTTAATTATTATTCATCCGCTTTTATAAAAAAGCACTTGTGTAATGT
CATTGCCAATGTATAGTTTGAGTCATTTTTTAGATACACTTGCTAAGGAA
ATACAACTTTACTATTTTATAGGTACATGTGAGGGGGGAATATTCACATA
TGAAAAAACCACAGGTCATTTTTTACGAACTGCCAAAGAGGAGCCACTAT
TTCCAGATACTTCAACCCCTGGAATTACAGAAAAATGTTCCGAACTCTGT
ACCGGTTTAGACTCGGATTGCCCCTCCTTTTCTTTGGATTATAGTGGTCA
AAGATGCTTCAAACTCGACCGTAATACTCAAATAAGAGGGGATTCTCTTG
CTCCAAGGGATGGTACAAACTACTTTGAAAAAATTTGTCTCAAAGGCTTT
GATGTAAGAAATAGATGTCAAAATAAAGTTTGGGCCTTTGAGAGGGTACC
AGGAAAGATGCTGGATGTAGATCCTGATCAAATTTATGAAAATATTTCAT
TACGTAGAGGTTGTGAAGAACTTTGTTTAAGAGAACGAGAGTTTATATGC
AGAAGTGCAAATTATGACTCAATAACACTAAAGTGTACTCTGAGTCGATA
TGATAGACGAATGCTCGGAACGGAGTACAAGAACACTTCAAAATATTCGA
ATTATCTTGAGAACAACTGTATTGAACCAAGTAGGGCAATATTTAAAGAG
GTTACTTTAGATCATTTATGCTCATTGTCTCATTATAGATCAGATAACCT
GTCCTTATATGAAAATTGAAAATGCATATCCCCGCTATCTCGACGAAGTT
GTTCGTAATATTAAAGACGAAGTTGCATGTGAAGTACAATGTTCCTTCAA
TGAAAAAATTATTTGCAGATCATTTGCGTTCTATTCGRCTGCCAGTCAAT
GTTTTATATCAGGAGATGACATAAGTATGTAAAAGATATAAAAACAATTA
TGCTTATATATGAACTTTTAGAAGAACGAATATTTATTCTGGTTATGCTT
TAGTTTCAGCATCTGAAGGAGCTCTACAGACTCGACCAGGAACAGACTAC
TTCCAAAGAAAATGTAAAGAAGGTTTGAGTCATAGAGACAATCAAATCGA
TTCATTCCCGTCAGGAAGTGAAGAAATACAAACTACTCGATTTGATATGG
ACTTTGATAGAAATCGTAGGCCTACATCAGCAACTGGAGCTATGAATAAA
CGAAAAGGTAAAAGTGAAGGTACACTGCACTTTTCGAATCAAATATTTAG
TTAATGGTTTTTGATGCATTGATTCCTTTTTAGAGAGGTATTGTTCGTTT
GGTAGATTAACTTATGAAAAAACAACAGGATATGAACTTATCAGAGGAAA
TCCCACGAGGCTCTACTCTGAAAGAGATGGAGGTATTATAGAGCAATGTG
CCTCTCGTTGTGATGAGGATGCGGATTGTAAAGGCTTCAATATGGACTAC
AACCGAAATGAATGTCAATCATTGACAGCTAATTCTTTGAATAATTTATT
CAATTTGAGAACATCTAGCGGAGTTTCATATTTCGAAACCACATGTTTAA
GAGGAAAGTTTTTTTTTAATAATTTTATTGAGTTTATTGAACTCTTAATT
TACTTTTATAGGTTCAGGTTGTGGATTATTATGGACTTATGAACGATTTG
TCAACAAGGAGCTAAAAGTGGATCCTAAAAAAATTCAAAGAGATGTTTCT
AAAAATGAATGTGAGGATCTATGTCTAAGCGAAAGTTCATTTGTGTGTAA
ATCTGCTAATTATGATCACGTGAGAAGAGATTGCTTCCTATTAAATGTCG
ATAGATTCGAAATTGATCAGAGTCTGCAATCTAAACAAGGAGTTGACTAT
CTTGAAAATCAATGCGAAGCCATAAAACGACGTAAATATAAAACATTTTT
AATCATATTTTTTCTAACAAAAGGTTGAGTGAGTCGGGAAGTGTACTTCT
TCCGTGATTTAGATAATGATTTCGTTTAATTTTTATTATAAATCATTTTT
TTATTATTTGTAGGAGGCTGTGACTATGGTCCTCAAACTAAAGATAGGTA
CTTAATTTATACTGACAAGGTTGTTAAAGTGTTTAGCGATGCTTCATGTC
GGGAAGCATGCTCGAGTGAACGTTCTTTTTATTGTCGTTCATATACTTTT
CTCAGTGAAGTACGTATTTATTAATAAAATTACTATGAATTTTACAAATA
TTTTCATTGTAGAGTCGACCTGGTCGACCCCAGTGCCTCCTTAGTGGAGA
TAATGGTGCATCTTCTGGAGGGGACAACGCATTTCAATTAAGTAATGGGG
CCCTTTTTTCCGAATTAGACTGTTCTGAAGGGTTTACAAGGCCATTGATG
AATGAAAATCGTCGACCAATAGAAGTTGGAAGTAATCCTGATAATACTTT
TGTAACTAGTGGAGGTGCCTTTGGTTCAACTACATCAAATTCAAAGAGTA
ACCCTAATCCAGAAAACTGCCGTTCAGTTGGTCTCAGTACTTCTTTTGAA
AAAGTTATGGACTTTACTTATGATCGAGGACCTGAAGAAGAGTTTTCGAC
TTCTGTTGATATTGGAATCATTGTTCAATGTCTTAGAGAGTGTCAAAGTC
GTGGTAGACTTTGCCTTGCTGCTACTCTAAGAAATGAAAGAGGAGGAAGG
CAGTCCTGTTATGGTTTAGGAAACTCTGCCACYGMGGAMGGGKCTGAKCC
TGTTSCAGCCACTGGAGTGACTTATTTCGAGAAAATATGTGTTAGTAAGT
GTTTTCCTTATTAGTTATTTGAAATATTGAATTATTTGTTTAACTGATAT
ATTTCATTCAATAGATCGAAATTGTAGAAAAAGTTGGGCATTTACCAAGA
TCCCTCAATATGAATTCATTGGTTCACCGAATAAAGAAGTTCAAGACGTC
GAAAGTATATCAGACTGTCGAAACTTATGTTTGGACATATCATCCTTTTC
TTGTAGATCTATGACATATAATAGAAATACTCGTATGTGCAGAATGACTG
AAGAAACACGGCGTTCATCTCCTTCTGAATTTCGGCCTGCTGAAAGAGGT
GTCGACTACTATGAAAATGAATGCTCTAAAAGTAAGCTTATTGGATTGAA
CGATGATATTAAGAAAGTATATGAAAATGTTATTTTTAGTCCCATCAAAC
TGTGAATATGTTGATAATACTGGAATGTACCTTCCTTTTACGGATACTTA
TATTTCCCGTGTATCAGATATCGAAGAATGCCGGTCACAATGTAGTATAC
AAGACAACTACAATTGCCGATCTTTTAACTTTAATAGCTTTCGTAAAGAG
TGTTTTCTATCCTCTGATGACTCTGTATCCCTTCCCTCCGGGCTACATCA
GGACAGAGATTTTACGTTCAGCGAGCGTGGCGGATGCAACAATGGTACAA
AAAACCATGTTAAAAAAGACGGTGAGAAAGAAAGTCAAACGTGGTTACTC
CAAAGGATATTTCCTAAGGCACTGCCATCATTTCCGTTCAGATAAACTTG
TCTGGATTAAAAAAAAAACCAACCTAATTAATATTTTGCATGAATTAGCC
AAAATCTCCTTTGGTGACTGCTTCACTTTCTTTCATATCTTCTATTCACC
CTCTAATTTAAGTTTAACTATATGAAATTTCAAATAATGATATAATCACG
TTATTTTGTATATATTTATACCTTATATCACTTTAGATATTTGAAAAGAA
ATGTAGTGTAAGTGTTTTCTTTCTATTCAAATGAAAATTAATTTTATTCG
CATTATATAATTTATCATAATTAATCATGTATCAACTCACTATGTATGCC
TTGCCATTCCTTATTTCAGTAAAAGTAGAATGCACACCCAGTGATATGTT
GGTCAATTTAGCATTTGGTGCTGAGTTTAATGGAAGGATATACGCTACAG
GGAATCCACAGGCATGTTTTGAACTTGGAACTGGTCAATCAGAGATGATA
CTTAAGATACCAATCAGCTCTCAATGTGGAACTGTACAACAGGTATTTGT
CTTTTCAATTATTCAGGATATTTATCAGACAACTTTCTGGTTTTTAGAAT
CCAGGTAGATATGTTAATCACGTTGTCATACAAGAGAATCCTGTTATCAT
GCAAGATACTGATAAAACTGTCCGAGTTGAATGTGCATTTACAGCAGAGG
ATCAAACTGTTTCTTTTCGACCTACTGCAGGCGTGGGAGGTCGATTGGAA
TCTGGAGGAGGGATCTCCGTTACAGTCCCTTTTCAACCAACTGGAACGAA
TATAGTTACAAATACTGCACCCACACCTGGTGTACGAATGCGAGTTATTC
GTCGTAATGGAGAAACTGCTTCCATGGTTGGTCTTGGAGAAAATTTACAG
TTGCGTATTGAAATTGATCGAGATTCGGCATTTGGGCTATTCGCCAGAAA
ACTAGAAGCAAAAACGGATAATGGGGAACTAATGAACCTCATAGATGAGG
ACGGATGTCCGATCAATGAAATAATTTTTCCAGCATTAGAACTAGAAGGG
GGCACTCGAGCTTTATATGCCAACTTTAAGGCCTTTCGATTTCCTTCTAC
TCCAATTGTTAATTTTATTGCTACAGTTCAATTTTGTCAGGACCTATGCA
AACCCGTATGATTTTTTTTTTTTTTGGTAAATGCTGATTTGATATGTAAT
TATTTAAATATATTATAGATGCCTTGCTCTGGTGGATCAGAATCATTTGG
TAAAAGACGTAAGCGATCAACTCAGGATGAAAACAATAAAGAGGAGCGTT
CATTTTTCCCAATCACAGATGAGGCTGAAGGACACTCAGTACAGCCAAGA
ACTTCCAACTCATTTGCGAACGATAGTTCTAATGTTCAAGAGTCGAAAAA
AAGAAAGACTAAGGAAGATTTACTTCCAGAACACATTGATCTTGGCCTTC
GTTTAACAGTAGGAGAAAATGTTCTACATAAACCATTCCTTCCGAGTCGT
CATGGAGGTGGTGTATTTCCAGAGTTTCCTGGAGAGAGTCAAAGAGACTC
AAATAGTCAGTATTATCCGTCATCTTCCTCTTCAGTATCAGGTCACTAAA
TCATAATGCCATATTTTATTCAGAAATATTGAATTAATTCTTTTATAGAG
GTGAATACAGAAGAGGCTGAGTACCTTTGTAGTTCCCAAAGCACAGTCAT
AGTTGCTATCTTTGTAATCCTAGTCTTTAATGTACTTCTCACTGCCGGTT
TTATACTCTTTTATCGGAGGAAAAGAAAGGAGTGGATTAAGGGATCAAAT
AACGCGGGTCCTGCTTTGCCTCCTAGGCCATCAGGGTCTGTTATATTTAA
GAATGGAAGGGCATCCTCAGGAAGTTCAGGATTTGCTCTTACGACTAGAC
AGCAACAGCGAATGAACTCATCAATGTCTTCCTTACCAAGGAATTAG

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