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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s588 | supercontig | LSalAtl2s588:73133..77912 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000009243 >EMLSAP00000009243 ID=EMLSAP00000009243|Name=EMLSAP00000009243|organism=Lepeophtheirus salmonis|type=polypeptide|length=965bp
MGSSEMICLHSNDFESNLKSGFSQLRNDEDFFDVTLTCGSKHIKAHKMIL
SAYSSFFRSLIKSVPHTHPLLYMRGINFNHLESILSFMYNGEVYIKPHEL
DQFLSIAEELKVNGLMQHQSFNGANTLKRSLSSTDDTPVHEVKSESSSPL
HLPDKRILIQNTVSTPITKVDEDSLIEDITTNRSNSMKEEPSNLDFQEPD
DDQKIYDTSFQPECIENQNQETDPLALRYVLVVMATEGSNNDIEFLQHII
YYLSSNSIPPEVTEVETFVRKARCFVIRNKQLFFGGNNSNLRVLDNIDER
RNLLISLDHSNDAMSKYYHIGKDFYWPYFDVDMGVTAHSNPFSSPVRLLH
MNMFNHAIYLMIEEQSGFLIGHVESGHSHSFLADFIFSVFCKNGELPQTL
TLYNVDDFLLHNLKVNLAYLFKDLESMKNNLSVFSSLLQSFDMMEDIEKD
RIHSLQMFIHSEKKSWVRKFPGWVYTQNSKINVFSPKKNLRQSTKRSAST
VNKANSVVPSKKKTTSNPLATSKATCSSSSSNMQENTESVVSTVKSLLSL
TKSERSRRGKYYKYDPEIRDAIAEFALAHGATEASKHFTDKLDLKISSST
IRNFIKSYQAYTPQVKEEIGKYALDHGPEKCFEHFKSRFNPNETGEESSF
TMSLVNRFKKYYESKTTAAKNDDGTTRIFVVDIPVSSSSSSSISLTEGPT
KNFFNSKLKNDIGQYAYHCGNKKTVEHFSNRLQVPMKESTVRKFKKRWME
FNNISLPESVPNKVPKSNISLPKEEKLSNGVSLPEKDAQESRIEEEVDEE
DEHGDENSEDDEVNEGKNKNRLYSSYDPELRAKIAKYAIHHNNKETAEYF
KVVHNKXLPRSTIRFLRDKFKSMDDDNEDMTQLDFGPRGRPTRLGCYDSI
LQKCIIDLAKSGEKLTSFLVIATAKQVLLKYEPSLLKENGGNISLDPNWA
KSILRRVQKSLRKGS back to topmRNA from alignment at LSalAtl2s588:73133..77912+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000009243-705090 ID=EMLSAT00000009243-705090|Name=EMLSAT00000009243|organism=Lepeophtheirus salmonis|type=mRNA|length=4780bp|location=Sequence derived from alignment at LSalAtl2s588:73133..77912+ (Lepeophtheirus salmonis)
TAAAAAGTGACGTCATTTTTTATAAAGTGTGAGAAAAAAATATAATTTTT
GCCATGGGAAAGGTGCAATAACTTAACTCATTGCTTTTCCGATTTATAAA
AGTCATTTTGGTTTCATCAAAATTCTACGCTCAATAGACATTGCAGGTAT
CTATTGAAAGTCTTTGATTAAGTCATGTCTGATTTTATGTAGTAACCAAA
AATAACTAGATTGTTTATTTCGTTGGCGCCATAATTTAAATTTATATTAT
ATATAGTAAAAGTATTAATAATAATAATTAATATATCATTAACTTAAACC
ATCTTTCTTCAAATATAATTGGTATATTATAATATATGATTTTAAAGTGA
GGTTCTGGATTCCATTTCCCATTTGGGTATTTGAGATAATAGAGAAACAT
AATCAAACACAGCACTTGACCAACTCTTTACTTGACTCTTTTGTTCTTTA
TTGAAGGAAAGATGGGCTCGAGTGAAATGATTTGTCTTCATTCTAATGAT
TTCGAGTCGAATTTAAAATCAGGCTTCTCTCAACTTCGAAACGATGAAGA
TTTCTTTGACGTGACCCTAACCTGTGGCTCAAAACACATAAAGGCACACA
AAATGATTCTCAGTGCCTATTCCTCCTTTTTTCGATCATTGATTAAGTCC
GTTCCTCATACACATCCGCTTCTGTATATGCGAGGGATTAACTTTAATCA
CTTGGAGTCCATTCTTTCCTTCATGTACAATGGCGAAGTATACATCAAAC
CCCATGAACTAGATCAATTTCTATCCATCGCTGAAGAGCTTAAAGTGAAT
GGGCTCATGCAGCATCAATCGTTTAATGGAGCCAATACATTGAAAAGATC
TCTTTCTTCTACGGATGATACTCCAGTCCATGAAGTGAAAAGCGAATCAT
CGTCCCCCCTTCATTTACCAGACAAAAGAATTTTAATTCAGAATACTGTA
TCTACTCCTATTACTAAAGTAGATGAGGATTCATTAATAGAAGATATTAC
TACTAATAGATCCAACTCAATGAAAGAAGAACCTTCCAATTTAGACTTTC
AAGAGCCTGACGATGATCAAAAGATATATGACACCTCCTTTCAACCCGAA
TGTATTGAAAATCAGAACCAAGAAACAGATCCATTAGCGTTAAGATATGG
TATCTATTAGTTATTTAAAAAATGTTTTATAATTAATTGCTACAAATCTC
TCAAATTATGCTGACAATAATTTATAATTTCAGAAGTATTTGATGCAAAG
ATTCTCAAACATGTTTCAGATCGTGATGGTAACAAAATGTGTAGTTGTTT
AAAATGTTGTTTTACATGTCATTGTAAAAGAAACGTAAAGAAGCATATAA
AAGGAAGGCATTTATTCACTGGTGGGATAAGCTGTGAAAAATGTAAAGTC
CAGTTCAAATCTAAACAATCTTTGTTGAAACATAATGTAACAGTTCACAC
GTTTGATCCCGTGATTTGAGCAGATGCTCTTCCAGATAGTTTCAGAACTT
ATTGGTTCCACCTGTTCTAACGGTATTTAATCAATACATTTAAATAATTA
ACCTTTTAAAATACCGATAAATTAATTGATAGGCATCATTGACGTTTTTC
ACCTTAATCCTGGTTAATATTATATAAGATTGAAGAAAATATATTCAATA
CGTACACAACACGCAACTTCTAACGTAATTAAATTATATATCACGTCAAT
ATGAAACAATTATTGTACATTTTAATAAATTGATACATTCTATATGGGAA
TATAAATCCAGAAAAGTAGTGAATTATTTTATGAATTACATTTCTTTATA
TTTTCTTCTTCGGTTGCGTGATGTTTATTGTATATAGCCATATTTAGTGT
ATGTCTTAGCTATGACAGTTTATTTAGTTGTTGTGAATTTAAAGGTTCTT
TAATTCTCTTATCGGCTGSKAATGTTAATAMTTCACGGTTTCATTKCGTA
TTTATTAATTAATAAATTMAATCGTCATTATCCACAAATGAGGCATTTGT
GATGGGAAATCAATGTTCCAGAATAAATGTGTTTGTGTGTAGGTATAATA
AAAATATCGACCAGCAATGAATTTTGATGTAAATTGGAGTTCTCGTTGTG
ATGGCCACTGAAGGAAGTAATAACGACATAGAATTTCTTCAACATATCAT
TTATTATCTTTCGTCTAATAGTATACCTCCGGAGGTCACTGAGGTTGAAA
CATTTGTACGGAAAGCCCGATGCTTTGTTGTAAGTACATAATGGGAGCAC
AGCTCCATAGATCATCTTATTGGATCTTAATTTTTTGTCTTTAACTTTTA
AGATACGTAACAAACAACTTTTTTTTGGAGGGAACAACTCGAATCTCCGC
GTTTTGGACAATATCGATGAACGAAGAAATCTTCTAATCTCCTTGGATCA
TAGTAATGATGCCATGTCTAAATACTATCACATTGGGAAGGATTTTTATT
GGCCTTATTTTGATGTAGACATGGGCGTTACCGCTCACTCAAATCCCTTC
TCTTCTCCCGTACGACTTCTTCATATGAATATGTTTAATCACGCTATATA
TCTCATGATTGAGGAACAATCCGGATTTCTTATTGGACATGTTGAGTCGG
GTCACAGTCATTCCTTCTTGGCGGATTTCATATTTAGTGTCTTTTGTAAA
AATGGAGAATTGCCTCAGACTCTAACCCTCTACAATGTGGATGATTTTCT
ATTACACAATTTGAAAGTGAATTTGGCATATTTGTTTAAAGACCTTGAGT
CCATGAAGAATAATCTCTCAGTATTTTCCTCCTTGTTACAATCCTTTGAT
ATGATGGAGGATATTGAAAAAGACCGGATTCATTCTCTTCAAATGTTTAT
TCATTCTGAAAAAAAGTCCTGGGTTAGGAAGTTCCCTGGTTGGGTTTACA
CTCAAAATTCTAAAATAAATGTATTTTCTCCTAAAAAAAATCTGAGGCAA
TCCACCAAAAGATCCGCTAGTACAGTTAATAAAGCAAATTCTGTTGTTCC
TAGTAAGAAAAAAACGACTTCAAATCCTTTAGCGACCTCAAAAGCAACAT
GTAGTAGTAGTTCTTCAAATATGCAAGAAAACACAGAGTCAGTTGTTTCC
ACAGTGAAGTCTCTTTTATCTCTTACGAAATCAGAGAGATCTCGCAGGGG
AAAATATTACAAATATGATCCTGAAATTCGTGATGCGATTGCTGAATTTG
CCCTCGCTCATGGAGCAACTGAGGCATCTAAACATTTTACGGATAAACTT
GATTTAAAGATCAGTTCCAGCACTATACGCAATTTTATTAAAAGCTACCA
GGCATATACACCACAAGTTAAAGAAGAAATAGGAAAGTATGCACTGGATC
ACGGACCTGAAAAATGTTTTGAACATTTCAAATCTAGATTCAATCCAAAT
GAAACTGGAGAAGAATCGTCCTTTACAATGTCTCTAGTCAATAGATTTAA
AAAATACTACGAAAGTAAAACCACTGCTGCTAAAAATGATGATGGAACAA
CTCGGATATTTGTTGTGGACATTCCCGTTTCATCATCATCATCTTCTTCA
ATTTCATTAACTGAAGGTCCTACCAAAAATTTCTTCAATTCAAAGTTGAA
GAATGATATTGGACAATACGCTTACCATTGTGGAAATAAGAAAACTGTTG
AACATTTTAGTAATCGTCTACAAGTTCCTATGAAAGAGTCAACTGTTCGC
AAGTTCAAGAAAAGGTGGATGGAGTTTAATAATATTTCTCTGCCTGAGAG
TGTTCCTAATAAAGTCCCTAAAAGTAATATTTCTTTACCCAAAGAAGAAA
AGTTGAGTAACGGAGTTTCTTTACCTGAAAAAGATGCTCAGGAATCAAGG
ATCGAAGAGGAAGTAGACGAAGAAGATGAACACGGAGATGAAAATAGTGA
AGATGACGAAGTCAATGAAGGAAAGAATAAGAATCGTCTTTACTCATCAT
ATGATCCGGAACTCCGTGCCAAAATAGCCAAGTATGCAATACATCATAAT
AATAAAGAAACAGCCGAGTATTTTAAAGTCGTACACAATAAAAYCCTGCC
ACGATCAACTATACGATTCTTACGAGATAAGTTTAAGTCAATGGATGATG
ACAACGAGGATATGACTCAATTAGATTTTGGACCTAGGGGACGACCCACA
AGATTAGGATGTTATGACTCAATTTTACAAAAATGTATTATTGATTTAGC
AAAATCTGGTGAAAAATTAACGTCATTCCTCGTGATTGCCACTGCTAAAC
AGGTACTCCTCAAGTATGAACCCTCATTATTAAAAGAAAATGGTGGAAAT
ATTAGCCTAGATCCTAATTGGGCAAAATCAATATTAAGAAGAGTTCAAAA
ATCCTTGAGAAAGGGGTCCTAGTTGCGCGAATCAAATGAATGAGGGATAT
TTATGAGATATGTCTTGGGCGCAGTTAGGATGTTTAAGCTGGAGGAGCAT
TCAAGTGTGTCCATGTTATATTTATATATAGTTATGTATCATATAGTGGA
GTAAACATTGAATATAATTTCCTATCCAGTATGAATCGAATTGTTTATGC
TTGAGAATAATGTGTACTTACTAATAGTCGACATTCTATTTGAGTTTAAT
CTAATGCAGATTTTCATTTGTAATTATTTTATTATTTTTTTTGAGCATAA
TTAATTCTTCAAAAATATATGGATATGAGTAGGCGTATTATCGTCATATT
ATGATAAGTAGACTTAGGGTTTTTGAGTAATTTTTTTGGCCAATATGAGT
AAAAAAAGAGCGTTGAAATTTTGAAAAATG back to top
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