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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| LSalAtl2s615 | supercontig | LSalAtl2s615:621482..625852 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000009562 >EMLSAP00000009562 ID=EMLSAP00000009562|Name=EMLSAP00000009562|organism=Lepeophtheirus salmonis|type=polypeptide|length=1047bp
MRDHVGNLSEPELLRLGVWNRLGLFGIEPPSRKRSRSKRISSTPCPMEKK
KKPSSLFGRAIRDLAKTRVDLDAKEGLSVSVPEFLPGVVNFIRTDLEREG
IFRLSGSESRQRALRERLQTKESISDWCSENMSVIDAAALLKHWLRELPD
PLVPDVYQDVMMRCCSLSSEVDHALTLSTCLLPDNSSSTMSYLFRFFLDV
TLKSEFNKMDVRNLAIVLAPSIFPLVSKKGGSLESTKNILNLKTQIVEKL
ILNAKKICMVEGALAEDYSCTILKIAPNFTSQSEDNLDNENMDSNTAGPS
ERRSRKKKKKHRRSGSLSRVITAFKGIISRSATPANRESAHPDPVQTPDS
FFYSPSLSKNKRKAILAKDSDEVNNCCEEFDKNYFHCSPKISKMETPLTP
KVRGKSFSVKRFKKKKTLSKTKSNESTTLVNFSPLRSRISLMSRTPETPD
VVSTIKADRDLSDYEEIDLRTPCTPKQQKNNEECCSSVENDEKVYKSSPS
FNYSRFRKVPMTDRITKKEMLISLPIPNLDSSTRSLNNSLRRGQPNSLNT
GLAKPSPIKVEAPGLKPRIKMSFCKPPPPAEKSQSTVKVKKQDSLADLKK
DLSILIESSFGPETNSSSLDEESTNNVKDIINKMKSIEVNSGLSPVTRSQ
LRRQSSAFEFARPEVSSQSEGGGGVLTRRQSSAFENENQTLKRGDTIRSS
LARKNSSVKDLVRRIERIKVPSFMLITEGIGGSSNTAPVVEESLAEPEEH
WVDATEFFKTALSNSTEEQQDQFEGCKRSSIIRIRNENRGKVSKSVETFT
QPHSNRRVSARMGVSTTPSPFVTKRRQQTGIRTTTGAVKRHVPKNTDTNV
SITNHGNKQTSNGKKSENGKPRGKNRNRKNGRHLTIGYLGEPVGNRSPLK
ERVNVITVQRSKSAQNPIRNETSKKKKKRQLQYPSSENIPVQRSHSCKKS
ELPNVPMTLKHTLYDNHSPKIDKVKRNLSDRVMTPTKGGLKNEAIPYMKS
VRSKASSSKNIPSANLGATPPNKILAQNHKLSLNTPVRKSPRLAKMY back to topmRNA from alignment at LSalAtl2s615:621482..625852+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000009562-705409 ID=EMLSAT00000009562-705409|Name=EMLSAT00000009562|organism=Lepeophtheirus salmonis|type=mRNA|length=4371bp|location=Sequence derived from alignment at LSalAtl2s615:621482..625852+ (Lepeophtheirus salmonis)
CGAGAAGCTACCTAGAGGATTTAAATTTTAAATAGAAGAAGAAAAGGAGC
TAGCTGCTACTGTTGCTGCTGCTGCTGCTAGACAAAAACGTAAAGGAAAG
AAAAAGGAGGAAAATTTGAAATGCAAATGGAGGAGACATTTCAGTTAATG
TTATGAGGGATCACGTAGGAAATTTAAGTGAACCAGAACTCTTACGTTTA
GGAGTATGGAATCGATTAGGGCTCTTTGGTATCGAGCCTCCGTCTCGGAA
GAGGTAAATGATTAATATATTTGTATACATGGCTATTATTCCGTTTACTT
GCTTGGATGTACGTAGGAGTCGCTCCAAACGGATTTCTTCAACTCCTTGT
CCAATGGAAAAGAAAAAGAAGCCTTCGAGTCTCTTTGGACGTGCTATTCG
AGATCTGGCAAAGACCCGAGTGGACCTTGATGCAAAGGAAGGAGTAAGAA
GCCTTGTTTAATATGAGTATTGTATGATTTCTAATAAGTAATATACATCT
GTAAATGGAATGGCGTGAATTTGTGTGGTGTTGAGTGTTTCTTTTGCTGT
CAGAGTTGGAGTCTATTACCGAATAACATCGTATTTCTTTTGTCCTTAGT
TGTCCGTGAGTGTGCCAGAGTTCCTTCCCGGGGTTGTTAATTTCATCAGA
ACAGACCTGGAAAGAGAGGGGATATTTCGMCTCTCCGGATCGGAGTCCCG
CCAAAGAGCTCTTAGGGAGCGCCTCCAGACAAAAGAAAGTATCAGTGATT
GGTGTTCTGAAAATATGTCCGTTATAGATGCTGCCGCTCTCTTGAAACAT
TGGCTAAGGGAACTTCCGGATCCCTTAGTCCCGGATGTCTACCAGGATGT
CATGATGAGGTATGAAAGTGTAGTAGTAAATGACTTGCATATTCTACATA
TCATACTTCAAATGTCACTTTATACCTCTTTGTAGATGCTGCAGTCTTTC
TTCAGAGGTGGATCATGCTTTGACATTAAGTACATGCCTATTACCCGATA
ATTCGTCTTCCACCATGTCCTATCTATTTCGTTTCTTTTTGGATGTAACC
CTCAAGTCTGAATTCAATAAAATGGACGTTCGTAATTTAGCTATTGTCCT
TGCGCCGAGTATATTTCCTCTTGTGAGCAAAAAAGGTGGATCTCTGGAAT
CAACGAAAAATATTTTAAATTTAAAAACGCAGATTGTTGAAAAGTTGATT
CTCAATGCCAAAAAGGTATCAGTCTCATCTCTTTCGAACTCGTTTTAAAA
TTTTACGAGTTATTATACTAATAGCATATAATATATGTACACTTTATGAT
GAGACATGATGGTTATTTTTAATATGTTCATTCTAGATTTGTATGGTGGA
AGGGGCACTTGCAGAAGATTACTCTTGTACTATTCTTAAGATTGCTCCAA
ATTTTACATCTCAGAGTGAAGACAATCTGGATAATGAAAACATGGACTCG
AATACCGCAGGGCCGAGTGAAAGACGTTCTCGTAAAAAGAAAAAGAAACA
CAGAAGAAGTGGATCTCTTTCCAGAGTTATAACGGCCTTCAAAGGTATCA
TTTCTCGATCTGCGACTCCTGCAAACCGAGAATCTGCTCATCCTGATCCC
GTACAAACTCCAGATTCTTTCTTCTATTCCCCAAGCTTAAGTAAAAATAA
GAGAAAAGCTATTCTAGCCAAAGATAGTGATGAGGTAAACAATTGTTGTG
AGGAATTCGATAAGAATTATTTTCACTGCTCTCCTAAGATTTCGAAAATG
GAAACGCCGCTTACACCCAAAGTTCGAGGAAAGTCATTCTCAGTTAAAAG
GTTCAAAAAGAAAAAGACATTAAGTAAAACCAAAAGCAATGAATCGACCA
CGCTCGTTAATTTTTCTCCTCTGCGATCCAGAATTAGTCTTATGTCTCGT
ACACCAGAAACTCCTGATGTTGTTTCGACAATCAAAGCAGATAGAGATTT
GTCTGATTATGAAGAAATCGATTTACGAACTCCTTGTACTCCTAAACAGC
AAAAGAATAATGAAGAATGTTGTAGTTCCGTTGAAAATGATGAAAAAGTT
TATAAATCTTCCCCGTCTTTCAACTACTCAAGATTCCGAAAAGTACCAAT
GACTGATAGAATTACAAAAAAGGAAATGTTGATTTCACTTCCTATACCAA
ACTTAGATTCTTCGACACGATCATTGAACAATAGTTTAAGAAGAGGACAA
CCCAATTCCTTGAATACAGGATTGGCCAAGCCAAGCCCAATAAAGGTAGA
GGCCCCCGGTCTTAAACCTCGAATAAAAATGAGCTTTTGTAAACCTCCAC
CCCCAGCGGAAAAATCACAATCAACTGTCAAAGTTAAGAAGCAGGATTCT
CTTGCTGATCTCAAAAAAGATCTGAGTATTTTAATAGAGAGTTCTTTTGG
TCCTGAAACTAATTCATCATCTTTAGACGAAGAGTCTACTAACAATGTGA
AAGATATAATAAATAAAATGAAAAGTATAGAAGTGAATAGTGGTTTAAGT
CCTGTTACCCGGAGCCAATTGCGAAGGCAAAGTTCTGCTTTTGAATTTGC
TCGACCTGAAGTATCATCACAGAGTGAAGGAGGAGGAGGCGTTTTAACTC
GTCGTCAAAGCTCTGCTTTTGAGAATGAGAATCAAACATTAAAGCGCGGA
GACACCATTAGATCATCCCTTGCCCGTAAAAATTCATCGGTTAAAGATTT
GGTCAGGCGAATTGAAAGAATTAAAGTGCCTTCTTTTATGCTCATAACTG
AAGGAATTGGTGGTAGTAGTAATACTGCTCCTGTAGTAGAAGAATCACTT
GCAGAGCCGGAAGAACATTGGGTTGATGCCACTGAATTCTTTAAAACAGC
ATTGTCTAATTCAACGGAAGAACAGCAGGATCAGTTTGAAGGTTGTAAGC
GTTCTTCCATCATTAGAATCCGAAACGAAAATAGAGGAAAAGTGTCGAAA
TCAGTAGAAACTTTTACTCAACCACATTCAAACAGAAGAGTTTCTGCTCG
CATGGGAGTTTCCACGACTCCTTCCCCTTTTGTTACAAAGAGAAGACAGC
AAACAGGGATAAGGACTACTACGGGAGCTGTTAAACGCCATGTTCCTAAA
AACACAGACACCAATGTTAGTATCACAAACCATGGCAATAAGCAAACTTC
GAACGGAAAGAAGAGTGAAAACGGAAAACCAAGGGGTAAAAATCGTAACA
GAAAAAATGGAAGACATCTCACGATTGGGTATCTGGGTGAGCCAGTTGGT
AACCGTAGTCCATTAAAAGAACGAGTTAATGTTATTACGGTTCAAAGATC
CAAGTCTGCTCAAAATCCTATTAGAAATGAGACCTCTAAAAAGAAGAAGA
AAAGACAATTACAATACCCTTCTTCTGAGAACATTCCGGTTCAAAGAAGC
CATTCTTGCAAAAAGTCTGAGCTTCCAAATGTACCCATGACTCTAAAACA
TACACTCTATGATAACCATTCTCCTAAAATAGATAAAGTTAAAAGAAATC
TTTCAGATAGAGTCATGACTCCAACAAAAGGTGGATTGAAAAATGAAGCC
ATTCCGTACATGAAGTCTGTTCGCTCTAAAGCATCTTCCTCTAAGAATAT
ACCTTCAGCCAATTTGGGGGCCACTCCCCCAAATAAAATACTAGCTCAGA
ATCATAAACTCTCCTTAAATACGCCAGTTAGAAAGTCACCAAGGTTGGCC
AAGATGTATTAATCATTGTTCTTTTAACCATTTATCGTGTCCTTTTCATT
AAGTTAATTTCATTTTCCAACTAAATACACTTATATTTGTTTTACTACCG
GTTCATCACTGGAGTTTTTATATTACTTATCAGACCTCCTTTTAAAATTA
ATTAATCAGGGGTGGATTTATTTATATTCACTTTTTGTATGTTTTATATA
CGTGAAATTGTGAGTTATTATAATTTTCAAAAGCACACTTTTTTTAAAAA
ATATAGTGCAATATACCTCAACGATCATGACTTGCTTTTTATTAATGAAT
AATCCTACTTCAAATGATTAGCTCAGAAAATCAAATACATTGATAATTAA
ACCATTGTTTCCCCCCTAATTTTTTAATCAACTTGTATATCATTGAAAGA
AAATAACCTGTTTTTTGTAGTCTAAACCTATTAAATCATGATTAAAAATT
AAGTGTATATTAATATACATACATACTATATATAATATATATTTTTTCTT
TACATCATTAATTAATCAATAAGAAGAAGTAGCATTAGCATTACCTTGTA
CAATACATGACTTGTATGACATGTTCAATTTTGTTTATACATGGATGTAT
TTTTCTAGAATTAATTTTGTATTTTTTTCGGTAATTATATTACTATTATT
TGTACTGCTTATCCAATTAAA back to top
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