|
|
Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s645 | supercontig | LSalAtl2s645:223217..227522 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000009904 >EMLSAP00000009904 ID=EMLSAP00000009904|Name=EMLSAP00000009904|organism=Lepeophtheirus salmonis|type=polypeptide|length=1117bp
MIGSRLSNLRRFYHYFRGGNRIAISDGQGSLSFNDLYRDSSILAKAISSK
DPKASSEHSSNIGIFLNNEPNFVKALWSIWRAGKVGVPLCPSHPTQSHQY
FIHHSKLDAELLVPKKLIIIEEILKNCSSESSSSSHEEEAPPPNDPNDGA
LILYTSGTSGSPKGVWITHRNIEAQVSGMIKFWAWTSDDHILHVLPLYHL
HGLINCLLVPLSIGARVKMLPGFDAKKVWSYLTNSSMNISVFMGVPTIYS
LLTKEYELDKRNKTEIHDMLRSTYRLMVCGSASLPEPLLRKWQTISGHIL
LERYGMTEIGMGLGNSLEEDKRLPGFVGTPFPNVEARIMSEEGSVLAYSN
DVEFSYLSDKSGELQIRGPSVFSFYYGNEKATKESFDPNGDWFLTGDTAS
MNSRGVFKILGRTSADIIKSGGFKLSALEIEREYLSYPDISEIAVVGLED
EIFGEIVAAIIVPNKGYYLNSDILRGFGYKKLPPYSVPRQFMLVNSIDKN
HMGKINKKELKKMDSPPDPLKESDILSDEQNTDTLNWSISNITAASDLKH
DIIDSHIWCTPARLDSIKDKPSSFVKLSFEEAAEEDETECTNNTSRRFSS
LIEKDKKFEKMLNAMKNLEEFHQLKSKSPRKHNSTSSDYGSGRTSDRSTT
ILQTSSSSSNNTTITPFPPKRNIYQTNSILREERRMENEMKELKVSNESL
ILKLSRSEILLREKDSFIQRLEEQCKELGMNWEKESNILNKKLLLTRGEV
TTLKAENDELEKKISVYEMELEKALALASDFKGKIEEDETHRDKMLEEFV
SERTLNSQQLTEERNRVVELTKDKNSLLNEMKTKYFLFKKEISDLQSQSQ
NERTEYDKKLKGLAEENFKLKGEMNKTETHVHEFYQKQMESILAEKLQQL
RSYIEELEKNMREENKKIIADIRQEQRSQVSSLKEKYTNELRKLVAGFDS
ERQSFRSSLDAXRQEADALRDQIRSRPXHESSSLPQNNCIDDTSHSSALP
SSYSSSSRALLHKVQNNLPSQEAITDVLSSSRSSPILNNGLFKSFSFHED
DLSILTDTEKEDIVKGYIQKYINENPGALSDTSLMSRLNEMLYNLVLKKV
IRHMFPKRKKVILRLFD back to topmRNA from alignment at LSalAtl2s645:223217..227522- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000009904-705751 ID=EMLSAT00000009904-705751|Name=EMLSAT00000009904|organism=Lepeophtheirus salmonis|type=mRNA|length=4306bp|location=Sequence derived from alignment at LSalAtl2s645:223217..227522- (Lepeophtheirus salmonis)
ATGATTGGCTCTAGACTCTCAAACCTTCGTCGATTCTACCACTACTTCCG
AGGAGGAAACCGGATCGCCATATCTGATGGACAAGGATCCCTTTCCTTCA
ATGATCTCTACCGGGACTCTTCAATTTTGGCAAAAGCCATTTCCAGTAAG
GATCCCAAAGCATCCTCGGAACATTCAAGTAACATTGGGATTTTCCTAAA
TAATGAGCCCAACTTTGTGAAGGCTCTTTGGTCCATTTGGCGTGCTGGAA
AGGTCGGAGTTCCTCTCTGTCCCTCTCATCCAACCCAGTCTCATCAATAC
TTTATTCATCACTCCAAGTTGGACGTGATTCTCACTTGCGAGGAGCTCAA
ACATGAGGCAAATATCCTGTCCCAACTCCTTCTTAGCAGACTATTAGCAG
CGGATTGGGCTCAAAGATAGACCCATTACTTTATTACTAGTCTTATCTTA
AGACATAACACATTTCATTTCATTATATTTAACAGGCAGGAACTAACCTT
TATCTAATTAGTCATTCTACTTTTCAATCACTTACTTATTGTCAAGATGT
TAAAACATCCTTTATGCTTCATTAGGCGGAACTATTAGTACCTAAAAAAC
TGATCATTATTGAAGAAATCCTAAAGAACTGTTCGTCTGAGTCATCCTCC
TCCTCTCATGAAGAAGAAGCCCCACCTCCCAACGATCCAAATGATGGTGC
ACTTATACTCTATACCAGTGGCACGTCAGGATCTCCTAAAGGGGTTTGGA
TTACTCATAGAAACATTGAAGCTCAAGTCAGTGGTATGATCAAGTTTTGG
GCTTGGACTTCAGACGTGAGTTCTCTCTCTCCCTCTCAAATAATGTAAAT
TTAACACAAACTATTGTGTTCAGGATCATATTTTACACGTTCTACCCCTG
TATCACCTACATGGGCTCATAAATTGCCTTCTTGTTCCACTGAGTATTGG
AGCTAGAGTCAAAATGTTGCCGGGTTTTGATGCTAAAAAAGTGTGGTCAT
ATTTGACAAATTCATCCATGAACATAAGCGTTTTTATGGGTGTTCCAACG
ATATATTCCTTGCTTACTAAAGAATATGAGTTAGATAAGCGAAATAAAAC
GGAAATACACGATATGCTTAGATCTACTTACCGTTTGATGGTTTGTGGTT
CTGCCTCTTTGCCGGAAGTATGTAACTATTTCTGGGGTGGATTACGGCTA
TAATGTTTACCTAACAACTCATTTAATTATAGCCTCTTCTCCGTAAATGG
CAAACCATAAGTGGGCATATTCTTTTGGAGAGATATGGAATGACAGAAAT
CGGTATGGGTTTGGGAAATTCCCTGGAAGAGGATAAGAGACTCCCTGGTT
TTGTTGGAACACCATTTCCTAATGTCGAGGCACGGATTATGTCCGGTAGG
ACTTTATTTGTTGTTATTCCTTAATACTATTTGTAGTACATGTATTGTTC
TTCTTCAGAGGAAGGATCCGTTCTTGCCTATAGTAATGATGTGGAATTTT
CTTATTTATCCGATAAGTCAGGAGAGTTACAAATCCGAGGACCAAGCGTT
TTCTCTTTCTATTATGGCAATGAAAAAGCTACCAAGGAATCTTTTGATCC
AAATGGGGATTGGTTTTTAACAGGAGACACTGCTTCTATGAACTCACGAG
GTGTGTTCAAAATCCTCGGTAGAACTTCTGCAGATATCATTAAGTAAATT
ATACACATAATATGATTCTATAAAAATGAATTTATTTTGAGTGATTTTCA
GATCTGGTGGCTTTAAACTAAGCGCCTTGGAAATTGAGCGGGAATACTTA
TCATATCCTGATATATCTGAAATAGCTGTTGTCGGATTAGAAGATGAAAT
TTTTGGTGAAATAGTTGCTGCTATCATAGTACCTAATAAAGGCTACTATC
TCAACTCGGATATAGTGAGTGTTTGACATAAAAAAAATATATATATTCAA
GATCTTAATGAGTGTATATATTTACTTCATTCCTTTAGCTAAGAGGTTTT
GGATACAAGAAGCTTCCTCCATATTCCGTTCCCAGACAGTTTATGCTCGT
CAACTCTATTGACAAAAATCATATGGGAAAAATAAATAAAAAAGAACTCA
AAAAGTTGTTTTTTTATAATATTACTTAAAAAACGTGATATTTGACGATG
TGTCAATAAATAAATAAATATTCAAATCGATAGTTATAATTATGTTTGTG
ATATATGAAGAATAACGAGTTTTATAATTTATTTTTAAAGGATGGATTCT
CCTCCTGATCCCTTAAAGGAGTCTGATATACTCAGTGATGAACAAAATAC
AGATACTCTTAATTGGAGTATATCTAATATTACTGCTGCAAGTGATTTGA
AGCACGACATTATTGATTCTCATATTTGGTGTACCCCAGCAAGACTCGAT
TCCATAAAAGTAAGTGAATTTTTGCAATCAATATCAACTCCTCATTTATA
CAATCCTTTTCAAATGTGCACAGGATAAACCCAGTTCTTTTGTGAAGTTG
AGTTTTGAAGAAGCAGCCGAGGAAGATGAAACGGAGTGTACAAATAACAC
TTCTAGACGATTCAGTAGTTTAATCGAAAAAGACAAAAAATTTGAAAAAA
TGCTTAATGCAATGAAGAATCTAGAAGAGTTTCATCAATTGAAGAGCAAG
TCTCCTCGTAAGCATAATTCTACATCCTCTGACTATGGGAGTGGGAGAAC
TTCTGACCGAAGCACAACAATCCTTCAAACGTCATCATCCTCTTCAAATA
ATACAACCATAACACCCTTTCCTCCAAAAAGGAATATATATCAAACAAAT
TCTATTCTCAGAGAAGAGCGAAGAATGGAAAATGAGATGAAGGAATTGAA
AGTCAGCAATGAGTCTCTCATTTTAAAACTGAGTAGATCCGAGATTCTCC
TCCGTGAAAAAGACTCATTCATACAAAGACTTGAAGAGCAATGTAAGGAA
CTTGGTATGAACTGGGAAAAGGAATCGAATATCCTAAATAAAAAACTACT
TCTTACTCGAGGAGAGGTGACAACTTTAAAAGCAGAGAATGACGAACTTG
AAAAAGTAAGGTTTTTTTAACGTATAGTTTGAGTTAAATAGTTATATTAT
ATTTATAGAAAATATCCGTCTATGAGATGGAGTTAGAAAAGGCTCTTGCG
TTAGCCTCGGATTTTAAAGGAAAGATAGAGGAAGATGAGACACATAGAGA
TAAAATGTTGGAAGAATTTGTATCAGAAAGGACACTTAACTCGCAGCAAT
TGACTGAAGAGAGGAATAGAGTTGTTGAGTTAACCAAGGATAAAAATTCT
CTTCTGAATGAAATGAAAACTAAATATTTCCTCTTTAAAAAGGAGATCTC
AGACTTGCAAAGTCAGTCACAAAACGAAAGAACAGAATATGATAAAAAAT
TGAAAGGCTTAGCCGAGGAAAATGTAAAGAATATAAGATTTACATATCCA
TTTTCCTATCAATTCATAATTTATCTTTTATATTAGTTCAAATTGAAAGG
AGAAATGAATAAAACGGAAACCCATGTTCATGAATTTTACCAAAAACAAA
TGGAATCCATTTTAGCGGAGAAGCTACAGCAGTTACGATCTTATATTGAA
GAATTAGAGAAAAATATGAGAGAGGAAAATAAAAAAATTATTGCAGACAT
ACGACAAGAGCAAAGAAGCCAAGTTTCATCCTTAAAAGAAAAGTAAGACT
ATGCGCCGTGTCACGTACCAAACAGAATAGGATACAAGCTTTTAACTATT
TCTTTATAGGTACACGAATGAGTTAAGAAAGTTAGTGGCTGGRTTTGACT
CTGAGCGGCAATCCTTTCGTTCATCTTTAGACGCTGSTCGCCAAGAGGCT
GACGCTCTGCGTGATCAAATACGATCTCGCCCCAGKCATGAATCGAGTAG
TTTGCCTCAGAATAATTGCATTGACGACACTTCTCATTCATCTGCTCTTC
CTTCCTCATATTCATCTTCCTCAAGAGCTTTACTACATAAAGTTCAAAAC
AATTTACCAAGTCAGGAAGCAATTACTGATGTTTTATCCTCATCTAGATC
CAGCCCAATTCTTAATAATGGACTTTTTAAAAGTTTTTCCTTTCATGAAG
ATGATTTGAGTATTCTTACTGATACAGAAAAAGAAGATATCGTGAAGGGC
TATATACAAAAATACATAAATGAAAATCCAGGAGCATTATCTGATACTTC
TTTAATGTCAAGATTAAATGAAATGTTGTACAATTTAGTGTTAAAAAAAG
TAATAAGGCACATGTTTCCTAAGAGAAAAAAAGTTATTTTAAGGTTATTT
GATTAA back to top
|
