EMLSAT00000010095, EMLSAT00000010095-705942 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000010095
Unique NameEMLSAT00000010095-705942
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: -Missing-
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
10095fem Prohibitin unknown
  1. Nauplius
No visible phenotype
-Missing-
31.01.2018 - 10:03
07.02.2018 - 10:14
10095mal Prohibitin unknown
  1. Nauplius
No visible phenotype
-Missing-
31.01.2018 - 10:03
07.02.2018 - 10:14
10095 Prohibitin unknown
  1. Nauplius
No visible phenotype
-Missing-
31.01.2018 - 10:03
07.02.2018 - 10:14
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s6658supercontigLSalAtl2s6658:850..3163 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000010095 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000010095EMLSAG00000010095-692861Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000044882EMLSAE00000044882-753810Lepeophtheirus salmonisexon
EMLSAE00000044883EMLSAE00000044883-753811Lepeophtheirus salmonisexon
EMLSAE00000044884EMLSAE00000044884-753812Lepeophtheirus salmonisexon
EMLSAE00000044885EMLSAE00000044885-753813Lepeophtheirus salmonisexon
EMLSAE00000044886EMLSAE00000044886-753814Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768148auto768148Lepeophtheirus salmonispolypeptide
EMLSAP00000010095EMLSAP00000010095Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000010095

>EMLSAP00000010095 ID=EMLSAP00000010095|Name=EMLSAP00000010095|organism=Lepeophtheirus salmonis|type=polypeptide|length=256bp
MYTVEGGHRAIMFSRIGGIQDTIMTEGLHFRIPWFQYPIIYXIRSRPRKI
TSPTGSKDLQMVNISLRVLSRPXSMSIPTIHRELGRDFDEKVLPSICNEV
LKGVVAKFNASQLITQRQQVSXLIRKQLTDRARDFNIILXXXAITELSFG
REYAAAVESKQXAQQEAQRAAFVVDKAKQERQQKIVQAEGEALAAAMLGD
AISKNPGYLKLRKLRASTNIAKTVSQSQNRVYLNASTLMLNINDKHYDEA
INTLKK
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mRNA from alignment at LSalAtl2s6658:850..3163+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000010095-705942 ID=EMLSAT00000010095-705942|Name=EMLSAT00000010095|organism=Lepeophtheirus salmonis|type=mRNA|length=2314bp|location=Sequence derived from alignment at LSalAtl2s6658:850..3163+ (Lepeophtheirus salmonis)
GACGTCATGAGTGGTAACAGCGCTCATAAGGAGTGTGTTCCTTGCAAGCT GCATGTTAATAGTTAATAAGATTTGAGCTGTTTCCTTTTTATTCCAGTAT TCATTCTTTCCTCACGTTTTCTGGAGTTCCTTTANNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNGATGTCRAGCAAAATCAACGAAAT GGYGGGKCGGKTTTCCCMAGGAGGRGCCCCAAGGGKCTTGGNCTCGGTTT AAAGCTGATTGGTGCAGCTGTGGCCGGGATTTACGGCRTACAACAAGCTA TGTACACAGGTGAGTTAATATACTAATGAATGCCAAYGGCRTCCATGATG TTTGACTYATTTTGAAATTAATATTTCTAYGCTTATGTAAGTTGAGGGAG GTCATCGCGCCATCATGTTCAGCAGGATCGGAGGTATTCAAGATACCATC ATGACGGAGGGTCTTCATTTCCGTATTCCCTGGTTCCAATATCCCATCAT CTACGMCATCCGCTCTCGTCCACGCAAAATCACGTCTCCCACAGGATCCA AGGATCTTCAAATGGTGAAYATCAGCCTCCGTGTTCTCTCACGCCCCGMA TCCATGTCCATCCCCACCATTCAYAGAGAGTTGGGAAGAGACTTTGATGA AAAAGTCCTTCCATCCATTTGTAATGAAGTTCTCAAGGGCGTTGTGGCCA AGTTCAATGCTTCTCAGCTCATCACACAGCGTCAACAAGTRTCAATKCTC ATTCGAAAGCAATTGACAGATCGAGCCAGGGATTTTAATATAATTTTGGA SGWTKTAGCCATTACGGAACTTAGTTTTGGTCGGGAATACGCGGCTGCAG TTGAATCCAAACAGGTATGTTAGATCATACTCCTTTAGTGGATACAGTTC TGTATGTACATTATTGTTTAGGKCGCTCAACAAGAGGCCCAAAGAGCTGC TTTTGTTGTGGATAAAGCTAAGCAAGAGAGGCAACAAAAAATCGTRCAGG CGGAGGGAGAGGCCTTGGCTGCGGCAATGTTGGGAGATGCAATTTCTAAA AATCCTGGTTACTTAAAGTTGAGAAAACTTAGAGCTTCAACAAACATTGC TAAAACGGTAAATTATAATACTACTATGAGTAGATATTATCTATGATGTC CATTTCTATTGTCATTGCAGGTTTCCCAATCTCAAAATCGTGTGTACCTT AACGCCAGTACTCTTATGCTTAACATTAATGATAAGCACTATGATGAAGC CATTAATACACTAAAGAAATAAACTCTTGATTAGATTGTGGTGATATTTT GGCAGTCGTCTAATTAATGTATATCTGAAAAGTCAGGAAAAAACTCTTTG TTGCTAGAAGGTGGTCTTTCTCTGTGTCTCACCTTATTCATATTAGACTA ATTGATCGTATATGGTTTATCTTATTTCCTTGCATTTCATAAGCTTGTTT TATTTATTGATCAATTGAGTGTGAAAATAAAGACATTTTGAAATTAAAAA TTACTTTTTACTCTAACCAACCGGGATTATATGTACCTGAAATAGTGCTT AATTAAATCGTGATCACGAATCACCTCAAATCAATCATGTAAAGTAAGTC ATTTTGAAGCTCTCAAACTACTACAGTAATACCTTGACATCCGAGCTCAT AAGTCGAAGTAATTCATCACCAATTGTATCCCATCTATAAGCCTTTACCA AAATTTTTCCTCGGAATACATTTCATATCTCAAAAAACTCGGAACACTTG TCTTCAAGGCATTATTGCAATAAGAATGCTATTATTTTTTTAAAGGTACT TTGTCTTGTCTGTATTTTATGAGTCTTCAATAAATTATCCTAGATTTAGG AATATTCAAGTAGA
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