EMLSAT00000010107, EMLSAT00000010107-705954 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000010107
Unique NameEMLSAT00000010107-705954
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s667supercontigLSalAtl2s667:334082..336289 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000010107 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000010107EMLSAG00000010107-692873Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000044952EMLSAE00000044952-753880Lepeophtheirus salmonisexon
EMLSAE00000044953EMLSAE00000044953-753881Lepeophtheirus salmonisexon
EMLSAE00000044954EMLSAE00000044954-753882Lepeophtheirus salmonisexon
EMLSAE00000044955EMLSAE00000044955-753883Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776510auto776510Lepeophtheirus salmonispolypeptide
EMLSAP00000010107EMLSAP00000010107Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000010107

>EMLSAP00000010107 ID=EMLSAP00000010107|Name=EMLSAP00000010107|organism=Lepeophtheirus salmonis|type=polypeptide|length=364bp
MNPLSNPVEKLRGKRYRNECPIHGRNTWIQYSNDPISKLPTMTGKLFSID
IFPRFALIIYRINILIFDIFIFLISAILEYARLIYRYFIPRERKSIEGLN
ALVTGAGNGIGRQLAIELARNGANIVCLDFLINENEETSAEIKKQFPNIK
TWTVTCDVSSKKDVKLAIDVIKKSVGDIDILINNAGTLCCKPFVQHDFDQ
IERIISTNLLGQLWVLRAILPQMIARDTGYVVAMASFAGHAGVPNMVPYT
ASKFGIKGMMEALFIELRQGNRAHGIHLMTVSPFLVDTGMIKNRRVRFPD
ILDIETPERAAEVIISNMRQGNAIVFIPNILYYLMSIIRILPSRVQLLIT
DFLDSGIGVDYDQQ
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mRNA from alignment at LSalAtl2s667:334082..336289+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000010107-705954 ID=EMLSAT00000010107-705954|Name=EMLSAT00000010107|organism=Lepeophtheirus salmonis|type=mRNA|length=2208bp|location=Sequence derived from alignment at LSalAtl2s667:334082..336289+ (Lepeophtheirus salmonis)
ATTTCGAGTTATAATTGTACCTCCATTGACCATAGTATTTAGCAGACCTT CTCTTTTAGTCCTTGCATCTCTAAGATGTTTGCCGTTCATAAGATAATTC TCATGAAGCGGGAGCTCATATTGAACAAGTGTTACGTCAGAAGTAATCAG ACATAGCACATCCATGTGAAATGCGTCTAGGCTAGAACTGAGTAGTGAGT AGAGTAGAGKAGAATAATTAATTAGTTCACTAAAGTGTTCGACATATTTG TGTTATCTATACGTGAGAGTAGAAATAAAGCCTTGCAGCAACTGATTAAG GTTAATTATTTACATATCTATGAATGAATCCCTTATCGAACCCAGTTGAA AAATTAAGGGGGAAGCGCTATCGAAATGAATGTCCAATACACGGAAGAAA TACGTGGATTCAGTACTCGAATGATCCTATAAGTAAACTCCCAACAATGA CGGGAAAACTTTTTAGCATAGACATTTTTCCACGCTTTGCACTTATTATA TACCGGATTAACATTCTTATATTTGATATTTTTATATTCTTGATAAGGTA AATTCTCTGATTAGTATGACATGCCCACTTGATATTAACTATTATATACA TTTATTTATTGAACTATTTGATATTATGATCATACATTTTGTCTTTATTA AATAGTGCTATATTAGAGTATGCTCGTTTAATCTATCGATATTTCATTCC ACGGGAGAGAAAAAGTATCGAAGGACTCAACGCCTTAGTCACTGGAGCAG GAAATGGGATTGGAAGACAACTGGCAATTGAGCTAGCAAGAAATGGAGCG AATATTGTGTGCCTAGATTTTTTAATTAATGAAAATGAAGAAACTTCCGC TGAAATCAAGAAACAATTTCCAAATATCAAGACATGGACTGTCACCTGTG ATGTGTCATCGAAAAAAGACGTTAAGCTTGCTATTGATGTAATTAAGAAA AGCGTGGGTGATATTGATATTCTTATAAATAATGCAGGCACTTTGTGTTG TAAACCATTTGTACAACATGACTTTGATCAAATTGAAAGAATCATTTCTA CCAATTTGTTGGGTAATTGGGATATAATTTTCTTTTATGCCTTCTAGCTC TGTACATTTGAACGTTCAATACTTTCAGGTCAGTTATGGGTTCTTAGAGC TATTTTACCACAAATGATTGCAAGAGACACAGGCTATGTAGTGGCCATGG CATCATTTGCTGGACACGCAGGAGTGCCTAATATGGTTCCATATACAGCC TCCAAATTTGGGATTAAAGGAATGATGGAGGCACTTTTCATTGAGCTTAG GTATTACATACTTTCATTAATTAACAGTAGACACTTACTTTCTTCCACTT AAAAAAGAAAGAACAAGTTGTCCCATTTGAAGAGTTGTCAAATCATCACT TTTAAAAATATCTACATATAATGTATAAGTCCCATCTAAACTACATTACA TTCCAACAAACTAAATTCTTTGTTTTAGTAGTATTGCTTCATTCTATTTT ATCTGACTTATCAATCTACATTTGTAATTGAATGTATTGGTTGAGTAATA TTTAAAACGTCTTTTTCATTTATTTTAGACAGGGAAATCGTGCACACGGC ATACATTTGATGACTGTTTCACCATTTTTAGTGGACACTGGAATGATAAA GAACCGCCGTGTTCGGTTTCCTGACATTTTGGATATCGAAACCCCGGAAA GGGCTGCCGAAGTTATTATCAGTAACATGAGACAAGGAAACGCTATTGTT TTTATTCCAAATATTTTATACTACCTTATGTCGATCATAAGGATCCTTCC CTCTCGTGTTCAATTACTCATTACAGACTTTTTGGATAGCGGAATTGGTG TCGACTATGATCAACAATGAATGTCTTACTTTCTTTAATTTCAAAGTTAC TTCTTAGTTATTTATTAGAGTGTTTTTTAACATGACTTAAGAGTTATGTA TTTATCTTTAAAACTGGGTATGCCAATAGCATTAATTTTATGATACATTA GTTAATTTAATAGTTTTTTGTGTTTGTTTCAAAATAAAGATAATATGGGA ATAATCGGTTTTTTTTGTTATATTTTTTGTACTCTGAATCTTATTGCAGT CATCATAGTAATTAATGTAGATATATGTATTCAAGACATGCAATTAGTAT ATCCTGTAATTGTGTTATAAGTAATGTTGATTCGATATATTTTCTTATTT CATATATG
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