EMLSAT00000010213, EMLSAT00000010213-706060 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000010213
Unique NameEMLSAT00000010213-706060
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s679supercontigLSalAtl2s679:139734..140720 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000010213 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000010213EMLSAG00000010213-692979Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000045394EMLSAE00000045394-754322Lepeophtheirus salmonisexon
EMLSAE00000045395EMLSAE00000045395-754323Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773106auto773106Lepeophtheirus salmonispolypeptide
EMLSAP00000010213EMLSAP00000010213Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000010213

>EMLSAP00000010213 ID=EMLSAP00000010213|Name=EMLSAP00000010213|organism=Lepeophtheirus salmonis|type=polypeptide|length=188bp
MSGLGKKIVLITGASGGIGEGTALHFASLGSKLSLVARRKEELERVSEAC
KAKGAQDVIYTVQDLSSGEACSACVDETFNYYGGLDVVVNNAGVMYGQKL
QEVTPEIFDHSMNLNIHSALRXTQXATKYLEKSKKQPAIVNVSSIAGLRA
FPGALAYKISKAGLDQMTRCTALELISKGIRVNSSKSW
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mRNA from alignment at LSalAtl2s679:139734..140720-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000010213-706060 ID=EMLSAT00000010213-706060|Name=EMLSAT00000010213|organism=Lepeophtheirus salmonis|type=mRNA|length=987bp|location=Sequence derived from alignment at LSalAtl2s679:139734..140720- (Lepeophtheirus salmonis)
ATGTCTGGTTTGGGGAAAAAAATTGTTCTCATTACTGGAGCAAGTGGCGG
AATTGGAGAGGGAACTGCTCTGCATTTTGCATCACTTGGAAGTAAATTAT
CTCTGGTTGCGAGACGCAAGGAAGAGCTTGAAAGAGTTTCTGAGGCATGC
AAAGCAAAGGGGGCTCAAGATGTTATCTATACAGTGCAAGATTTATCCTC
TGGTGAAGCTTGCTCTGCTTGTGTTGACGAAACCTTTAATTACTATGGAG
GTATGACAGTATTTTCTTTGTGTACTCACAATCTCTTGTTAAAAGAAACT
ATGGTAGCTGGCTTAATTTATAATCATTTATTATTAAATCTATTTAATAA
TTCACCAGGCGATGTATCAAATATAAACTTCCTACATTTTTATGACCTAA
TACAGGGGTTCCCAATCAATAGGTGGCCTACATAGTTCATATCTAGACCC
TGAACCTCCTTTTAGGGGATCCAGGGATATAAATCAACATATTACGCCAA
AAATATTTCCCTCCATACATGCGCTGAGGKCCTTCGKCTTCCACAAAATG
GTTGTTTTTACGCATTTGGGAGCCCCTGAACCAACATTTTACCTAATTAT
TTCTTAAATATATAATTACTTATATAATATGTATGTATTAGTTAATTACT
ATGCATCTTATTCTTTCAAGGATTGGATGTCGTGGTTAATAATGCTGGAG
TGATGTACGGTCAGAAGCTACAGGAAGTAACTCCAGAAATATTTGATCAT
TCCATGAATCTCAACATTCATTCAGCTCTRCGAARCACTCAARCCGCAAC
CAAATACCTAGAAAAATCAAAAAAACAGCCTGCCATTGTCAACGTATCAA
GCATTGCAGGTCTTAGAGCCTTTCCCGGAGCTCTTGCGTACAAAATATCT
AAAGCGGGACTTGATCAAATGACGAGGTGTACTGCCTTGGAATTGATTTC
GAAAGGGATCCGAGTCAACTCTAGTAAATCCTGGTAG
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