EMLSAT00000010475, EMLSAT00000010475-706322 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000010475
Unique Name	EMLSAT00000010475-706322
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s696	supercontig	LSalAtl2s696:19871..26409 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000010475 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000010475	EMLSAG00000010475-693241	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000046666	EMLSAE00000046666-755594	Lepeophtheirus salmonis	exon
EMLSAE00000046667	EMLSAE00000046667-755595	Lepeophtheirus salmonis	exon
EMLSAE00000046668	EMLSAE00000046668-755596	Lepeophtheirus salmonis	exon
EMLSAE00000046669	EMLSAE00000046669-755597	Lepeophtheirus salmonis	exon
EMLSAE00000046670	EMLSAE00000046670-755598	Lepeophtheirus salmonis	exon
EMLSAE00000046671	EMLSAE00000046671-755599	Lepeophtheirus salmonis	exon
EMLSAE00000046672	EMLSAE00000046672-755600	Lepeophtheirus salmonis	exon
EMLSAE00000046673	EMLSAE00000046673-755601	Lepeophtheirus salmonis	exon
EMLSAE00000046674	EMLSAE00000046674-755602	Lepeophtheirus salmonis	exon
EMLSAE00000046675	EMLSAE00000046675-755603	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto769427	auto769427	Lepeophtheirus salmonis	polypeptide
EMLSAP00000010475	EMLSAP00000010475	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s696:19871..26409-

protein sequence of EMLSAP00000010475

>EMLSAP00000010475 ID=EMLSAP00000010475|Name=EMLSAP00000010475|organism=Lepeophtheirus salmonis|type=polypeptide|length=1732bp
MDSQGRRLVVCDNGTGFVKCGFAGKNLPTHVFPSLVGRPMIRALNNRVQD
IEVDDIMVGEKVSKLRSMLEVSYPMENGMVRNWEDMKHLWDYTFGPEKLN
ITPSESKILLTEPPMNPKRNREKMVEVMFEEYGFNGXFVXIXAILTLYSQ
GLLTGIVVDSGDGVTHICPVCRGFDLPHLTRRLDIAGRDVTRYLIKLLLL
RGYSFNHTADFETVRILKEKLCYMGYDIAKEEKLARETTFLVERYTLPDG
RXINVGGERFEAPEALFQPHLINVEGPGMAELLFNCIQAADIDMRSDLYK
HIVLSGGSTMYPGLPSRLZRELRQLYLERVLKGDTSRLAKYKMRVEVPPT
RQNSVFIGGAILANIMKDRDNFWIEKSEYEEKGESVINKLAYKIELRMNH
LILGLFGLLLRASVSVWPHSGKGSPPMYGDYEAQRHWQEXTLNLPISSWY
APGVKGNELNYWGLXXPPLTAYHSYLNGLFARDVLNQSHYVELEKSRGME
SPDHILYMRSTVLFADLIILLPALYYAFKGNLLGFGMLITYPGLILIDNG
HFQYNNISLGLFIMAXNCIMRXHDXLGSFLFVCALCYKQMELYHALPFFF
YLLGSSLKKESFPMGSLKKLIQIGVIVLGSFALIWFPFIDPQQEFKSLKQ
VIFRIFPLARGVFEDKVANFWCSLNLFIKVKTIYSQEELMKICAIVTGFV
VLPSNVHLFLRPNLRNFLCSLSVTSLGFFLFSFQVHEKSILLAVIPSLIW
IYSTRRDSSNAHLXATWLSVISIFSMLPLLKRDGLTIPTLALTLLYIIIS
RAFEKPFYKVLDYTWNDFILRFVYGSSLLFVVGLTFAISFIPPPNKYPDL
WPVIISLYSCVHFVLFLSYFYYYQFFGHYESEAIKLKKNLIHPYESAWMK
WDIFRAFYRSXLPLVEALFNDLLTTTHTLKLHKDKLNAINSSPSNSEESV
RTPCKCKPYEDSSCSSLQIPPNLIEYEKKEEDLKNKIRDLEALNSHALNV
VSTLQEESLEKSRKLLKLESNKARVVEKNLPSMKPKMEITCYVKENKRKL
PPSSSSSTSSSSNEKKFIHIPKEGTLDIVKMFERKNKILNDLIFKAEEEL
LSQKQRISELEDQLKRSSRSVHENYHPKSSSYISKILKDNAALREKIKSL
EVNPVKSSSCIKSACHHLHHQHRDEENKENFKSRSQVHKHMEDQHVHIHE
LEDQLRSSLDEIRELKLRIAHLQTSKKSFKDKVEILQAQQKVLVDSKDAS
KVNELVNFMEKQRNIYRDNVHELLEQLNIEGTANKIIPPSKTFVKEVDVI
DGICKECRGKKLRKINSINKEDFSETLDKYKACISSLKKEKNDLISRLEE
QTSQIKEKECLITSGKDKIEEWKQRAMSATSLEGITQECQYLQTELRSSR
DKVVHLSQELRIKDDHLKTLSDEKDEIICLLDDKTICLEKLKEEKMQMIN
DLNQLDSEKVSTDHRVAHAMSQLNAIQLELKTHQREKDEFRGKFEREKTV
GIQLRRENTDLRMEIENEIKEKEEAQSRESDIKSHIQKYINEVKRIEELL
SLCEKERSELLEQYRRLSSDVSTAESYGRRLETQVVSLEMDLKSRETELN
AAETRLRNLEKDLAEMSLSNENYRLQLASFTVRADLAEXELKESRNQQSW
INKDLSNVHDLAVTLNSQKVELLNKISEQESEINSMSNEIDKLRSELIFL
RKEYHEERAKTKNLEGKLSEYSRPGSSSSTYS

mRNA from alignment at LSalAtl2s696:19871..26409-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000010475-706322 ID=EMLSAT00000010475-706322|Name=EMLSAT00000010475|organism=Lepeophtheirus salmonis|type=mRNA|length=6539bp|location=Sequence derived from alignment at LSalAtl2s696:19871..26409- (Lepeophtheirus salmonis)
ATGGATTCTCAAGGAAGGAGACTCGTTGTTTGTGACAACGGAACAGGCTT
TGTGAAATGTGGATTTGCAGGAAAAAATCTACCAACACATGTATTTCCAT
CCTTAGTAGGTCGGCCCATGATCCGGGCGCTGAATAATCGAGTCCAAGAC
ATTGAAGTGGATGACATCATGGTGGGGGAAAAGGTTTCAAAGCTCAGATC
CATGCTGGAGGTGAGCTATCCTATGGAGAACGGGATGGTTCGGAATTGGG
AAGATATGGTAAGGATATTTTTGAGTGATCTCTTGTTTCCTGAACACATT
CATTCCCTAATGCTCATCTTTTCTTTTGCTCCTTCATTCAGAAACACCTT
TGGGACTATACCTTTGGACCCGAAAAGCTCAACATCACCCCATCAGAGTC
CAAAATACTCCTTACAGAGCCCCCAATGAATCCTAAACGCAACAGGGAAA
AAATGGTAGAGGTCATGTTTGAAGAATATGGATTCAATGGNTTWTTCGTG
SCCATTMAAGCCATTCTCACTCTGTATTCACAAGGTCTTCTTACTGGCAT
TGTCGTGGACTCTGGAGACGGAGTCACACATATATGCCCCGTCTGCCGTG
GCTTTGATCTTCCTCATTTAACGAGGCGATTGGACATTGCAGGTCGAGAT
GTCACTCGCTATCTAATTAAACTCCTTCTTCTCCGGGGTTACTCTTTTAA
TCACACCGCTGACTTTGAAACTGTGCGCATACTCAAAGAAAAGCTTTGCT
ACATGGGCTACGACATTGCAAAAGAAGAAAAACTAGCACGGGAAACCACT
TTTCTTGTAGAAAGATATACTTTACCGGATGGGAGAGKCATTAATGTGGG
GGGKGAGCGGTTTGAGGCGCCAGAGGCACTTTTTCAACCCCATTTAATTA
ATGTTGAAGGGCCAGGCATGGCTGAACTCCTCTTTAATTGTATTCAAGCT
GCGGATATTGATATGAGATCCGACCTTTATAAGCATATTGTTTTGAGCGG
TGGCTCCACCATGTATCCCGGTCTTCCTTCTCGGCTCSAGAGAGAACTTA
GACAACTCTATCTTGAGCGTGTTCTGAAAGGAGACACATCTCGACTTGCA
AAGTATAAAATGCGTGTAGAAGTTCCTCCAACCAGGCAAAACTCCGTGTT
CATTGGCGGKGCCATTCTTGCGAATATCATGAAGGATAGGGATAACTTTT
GGATTGAAAAGTCCGAGTATGAGGAGAAGGGAGAGTCTGTTATAAATAAG
TTAGCATACAAAATCGGTTAGTCAAATATTCGAGTTTCCCATGGAATGGA
ATTCAGCATTTATCAATTCTTTCTACTCTTTTTAATCCTTATCTAAATAA
AACATATATTTCTACCTATAATTATAATAATTATTATTATTATTTATGTA
CGTTTTGGAATTTTAATCTATTACTAGTAATATTTATTCAATGCCTGTTG
TGTTAATCAAATCTACATTCCGTAGAAAAAAACTATAATGAATAATATAC
TCTTGTACAAAATATTTTATCATAGAATATTGCTTTCTGAAAAAGCTTCT
GTTCATGTCATTCCGTTTTATTTGTAAAAAAAAAAGCAAAAAAAAACACC
TCAAATAAAACTGATAATTACCTTAATTAATTATAATTATATCAATATAT
ATATTCATGTATGTATGAACATCGTGTATTATTAGTAATTATTACTGCAA
CATATTGGTAAAAAAGGGATAGGGGCTTGTTGATGAAAGCAAGTACATAA
GAAATTGTCACATGAGAAATAAATGTCTGGATCGATATCCTTAAATACCT
CTTTATAATATGAAGCTCGAGGATCTGCTACATCCCTGAAGCAGCATCTT
GTAATTATAAAAGTCTACCTAAACTTAATTGATAGTCAAGAATACGTGGA
TTGATAATTTACTATTTATGTTGAATSAAAATCTCTGGGCCCTAATAATG
AAAACGTCATCTTGAACCGCTCACGCAACCTATCAAAACGTAAACATTAA
TGTTATATGAACGTCTCCAATTTACTTGTTGACAATTGTAGAATTAAGGA
TGAATCATTTAATACTGGGACTATTTGGACTCCTTCTTCGGGCCAGTGTC
TCAGTGTGGCCTCACTCGGGTAAAGGAAGTCCTCCTATGTATGGTGACTA
TGAGGCTCAGCGTCATTGGCAGGAGGKAACTCTTAATCTGCCAATATCTT
CCTGGTACGCTCCTGGAGTAAAAGGAAATGAGTTAAATTACTGGGGTCTT
GMCTMCCCGCCCCTAACAGCATATCATAGCTATTTAAATGGATTATTTGC
GAGGGACGTTCTTAATCAGTCTCATTATGTTGAGCTTGGTACGTATAATA
TCAAGACTATGAATGAATATGTCAAAATCTTGATCATTTCTTTGAATTTC
CATTACAGAAAAATCTCGAGGGATGGAATCTCCGGATCATATCCTATATA
TGAGATCCACAGTTCTCTTTGCGGATCTCATTATTCTTCTTCCTGCTCTT
TACTATGCTTTTAAAGGCAATCTACTTGGTTTTGGCATGCTCATAACATA
TCCTGGTTTGATTCTCATTGACAATGGACACTTTCAGTACAATAACATAT
CCTTAGGACTCTTTATTATGGCTGKTAATTGTATTATGAGGKCCCATGAC
TTKCTTGGATCCTTTTTGTTTGTGTGTGCTTTATGTTATAAGCAAATGGA
GTTATACCATGCTCTTCCATTCTTCTTTTATTTATTGGGATCATCCCTCA
AGAAAGAAAGCTTTCCTATGGGCTCTTTGAAAAAGCTTATTCAAATTGGA
GTGATCGTTCTTGGATCATTCGCTCTCATATGGTTTCCGTTTATTGACCC
TCAACAGGAGTTTAAATCTCTCAAACAAGTCATTTTTCGTATATTCCCGC
TCGCTCGAGGGGTTTTCGAAGATAAAGTAGCAAACTTTTGGTGCTCATTG
AATCTCTTTATCAAAGTCAAAACTATTTATAGTCAAGAAGAATTAATGAA
GATTTGTGCCATCGTCACTGGATTTGTTGTTTTACCCTCTAATGTTCACT
TATTTTTGAGACCAAATTTGAGGAACTTTTTATGTTCTTTGAGCGTCACG
TCCCTTGGATTCTTTTTATTCTCTTTCCAAGTTCATGAAAAGAGTATTTT
ATTAGCAGTCATTCCGAGTCTGATATGGATTTACTCAACTCGGCGTGACT
CCTCAAACGCACATCTCMTTGCTACTTGGTTATCTGTGATATCTATTTTT
TCAATGCTTCCACTTCTTAAAAGAGATGGTTTAACCATTCCAACTCTGGC
TCTTACTTTACTGTATATAATCATCTCTCGGGCATTCGAAAAACCTTTTT
ATAAAGTATTAGACTATACCTGGAATGATTTTATTTTGAGGTTTGTTTAT
GGATCGTCGTTATTGTTCGTGGTTGGACTTACTTTTGCTATATCTTTCAT
TCCACCTCCAAACAAGTATCCAGATCTTTGGCCTGTGATTATTTCATTAT
ATTCATGCGTACATTTTGTGTTGTTTTTATCATATTTTTATTATTATCAA
TTTTTTGGACACTATGAGAGTGAAGCAATTAAATTGAAAAAGAATCGTTG
AGTTTTGATTATTTTGATTTGTTATAATTTCATTTTTTTATATATTTCAG
TGAGGTATGACGAKGGCTCAMCCTCCTCCATCKGGRGKTGGCCATAGTTA
TTCATCCCTACGAGAGCGCCTGGATGAAATGGGATATTTTCAGAGCTTTC
TACCGGAGTGNTCTACCCTTAGTTGAAGCATTATTTAATGATCTCCTTAC
GACAACTCATACTTTAAAACTTCACAAAGACAAGCTTAATGCAATAAATT
CTTCTCCGTCCAATAGTGAAGAAAGTGTTCGTACACCCTGTAAGTGTAAA
CCCTACGAAGACTCATCCTGTTCCTCCTTACAAATCCCTCCAAACTTGAT
AGAATATGAAAAAAAAGAAGAGGATCTCAAGAATAAGATAAGAGATTTAG
AGGCCTTGAATAGTCATGCCTTGAATGTTGTCTCTACTCTTCAAGAAGAG
TCATTGGAAAAATCAAGAAAACTATTAAAGTTGGAATCAAATAAGGCGAG
AGTTGTAGAAAAGAATTTGCCGTCTATGAAACCAAAAATGGAAATAACGT
GTTATGTTAAAGAAAATAAACGTAAGTTACCTCCATCGTCTTCTTCTTCT
ACTTCCTCTTCGAGTAACGAGAAGAAATTTATTCATATACCTAAAGAAGG
AACCTTGGATATTGTTAAAATGTTTGAGAGGAAGAATAAAATATTAAATG
ATCTCATTTTCAAAGCAGAAGAAGAGTTACTGTCTCAAAAACAACGTATC
TCTGAATTAGAAGATCAATTGAAGAGATCTAGTCGCAGTGTACATGAAAA
TTATCATCCCAAAAGTTCCTCGTATATTTCTAAGATTCTTAAGGACAATG
CTGCACTCCGAGAGAAAATAAAATCTCTGGAAGTTAATCCCGTAAAAAGT
TCATCATGCATTAAGTCCGCATGTCATCATCTTCATCATCAGCATCGTGA
TGAAGAGAACAAAGAGGTAATTAAAGGCTAATCAATGAAGACAAAGTAAT
AAGAGTCTTCATTTTCAGAATTTCAAATCAAGGAGTCAAGTTCATAAACA
TATGGAGGATCAACACGTTCATATTCATGAACTAGAAGATCAACTTCGAT
CATCCCTTGATGAGATTCGGGAGCTAAAGCTTAGAATTGCTCATTTGCAA
ACTTCAAAGAAAAGTTTTAAAGGTAAATTTAAGAAAGAGACAAAAAAAAA
AAGATTATTTAATGAGATAATGTTAATTATCTTCAAGATAAAGTGGAAAT
ACTCCAAGCACAACAAAAAGTTCTTGTGGACTCTAAAGATGCAAGTAAGG
TGAATGAGCTCGTAAATTTTATGGAGAAACAAAGGAACATTTATAGGGAT
AATGTTCATGAGCTTTTGGAACAATTAAACATTGAAGGAACGGCAAATAA
GATTATTCCACCTTCTAAGACTTTTGTCAAGGAAGTTGATGTTATTGATG
GAATATGTAAGGAATGTCGTGGAAAAAAGCTTCGTAAAATAAACAGTATT
AATAAAGAGGATTTCTCTGAGACTCTGGATAAATATAAAGCCTGTATTTC
AAGTCTCAAAAAAGAAAAAAATGATTTGATATCACGTTTAGAAGAGCAAA
CATCACAAATCAAGGAAAAAGAGTGCTTGATTACATCGGGAAAAGTGTGT
ACTAAATTTAATTGTTAATCGTTGGTTACATATTGTTTTTAAAAAAAAAA
ATACTTTCTCTAGGATAAGATCGAGGAATGGAAGCAGCGTGCAATGTCTG
CGACTTCCTTAGAAGGTATAACTCAAGAATGTCAGTATCTTCAAACAGAG
CTGCGTTCCTCTCGAGATAAAGTAGTTCATTTGAGCCAGGAGCTCCGTAT
AAAGGATGATCATTTAAAGACGCTGTCAGATGAAAAAGATGAAATCATAT
GTCTCCTAGATGATAAGACTATATGTTTGGAAAAGTTGAAGGAGGAAAAA
ATGCAAATGATAAATGATTTGAACCAGTTAGACTCTGAAAAAGTATCTAC
GGATCATAGAGTAGCCCATGCCATGTCTCAACTCAATGCAATTCAATTGG
AATTAAAAACGCATCAAAGAGAAAAAGATGAATTTCGAGGGAAATTTGAA
CGAGAAAAAACTGTGGGTATTCAGCTACGGCGAGAGAATACGGATTTGAG
AATGGAAATAGAAAATGAAATAAAAGAAAAGGAAGAGGCTCAAAGTCGTG
AGTCTGATATTAAATCTCACATTCAAAAATACATAAATGAAGTAAAGAGA
ATCGAGGAATTACTTTCTCTCTGTGAAAAAGAAAGATCCGAACTATTAGA
GCAATATCGTCGCTTATCATCGGACGTGAGCACTGCCGAGAGCTATGGTA
GAAGGCTTGAAACTCAGGTATGTATCTACGTCAATGTTAGTTTTTTTGTA
ACAAAATTAATTTGTCTTATTATAGGTAGTCTCTTTAGAGATGGACTTAA
AGTCTAGAGAAACAGAGCTTAATGCAGCAGAGACCCGTTTGCGAAATTTA
GAAAAAGATTTGGCGGAAATGAGTTTATCCAATGAGAATTACCGTCTACA
ACTCGCTTCATTCACGGTTAGGGCAGATTTAGCCGAGKCTGAATTAAAAG
AATCAAGGAATCAACAGTCATGGATAAACAAGGATCTATCCAATGTCCAT
GACCTTGCGGTGACACTCAACTCTCAAAAGGTTGTTTTAAACATATATCC
TACATATTTATTTTAGGCTTATTTAATTGCTTGATATTTCTTCTTAGGTT
GAGCTATTAAACAAGATTTCAGAGCAAGAGTCTGAAATCAATTCAATGAG
TAATGAAATAGATAAGCTTCGATCGGAATTGATATTTTTAAGGAAGGAAT
ATCACGAAGAAAGGGCCAAGACAAAGAATCTAGAAGGGAAATTATCCGAG
TATAGTCGTCCTGGTAGTAGTTCCTCCACTTATTCTTAG

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