|
|
Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s729 | supercontig | LSalAtl2s729:47426..53045 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000010910 >EMLSAP00000010910 ID=EMLSAP00000010910|Name=EMLSAP00000010910|organism=Lepeophtheirus salmonis|type=polypeptide|length=889bp
MDDHFTLQWNDYQNHLMNAFTSLRNDKDFVXLTLSCEGRKISSHKMLLSA
CSPYFRGLLKDNPCPHPVIILRQTSYEDLVAIIHFVYNGEVSLHQSRVKS
FIKTAKSLKIRGLCEASEFGEEEEESVPSHEDQPQRKKVKLEDEEDEFGK
DWTFDYGGXAGDIPDESSTPNAVIAEVEREEFIDVNQSLSKRSRSYQRRF
LTKWMKIPEFAEWLMPYXKDPGRALCSICDKTVPAKIFDIRCHGNSKRHA
KMAQSLLTKPDVTVLGEDTAVVLDTDDHKTITIHHHDSVTVAEDEEEIRR
ALVATTSNTGXLEASEIEPDGGVSVDDHTSPIHIVPIEGEIQETSHDSKK
DEPGAIRVCKIVPQTKRYAQKFRDKWLNDPEFEPWLSRHESDPEKAVCTV
CRKTLNAKLYDLKHHSRSMRHRRNSIMEQGSGGLTEDTPDEERIYQTEEI
IIKTTTSNDNVGINDDIQGSIGGGDSETINSKDVTLTHETSTVEITTALR
SGSGTVHKRRAISIETKMDIIKRKEQGERTCQIAQDYGIAKSTISTILKN
GESIKKLSAIPSMMGAFYDTRRSRSGKMHEMERILNMWIEDQNSSNQIVN
GPIIQEKAREIWVDIGGPDDDESKTFVASRPTSQKRRAISLETKLDILKR
KDRGDRSTDIANAYGFGTSTVCTILKNRDQILKLSSIPCMMGSFYDTTRT
RGGKMHEMERILNTWILEQNEMNSVLNGPVIQEKAREIWVDIGGLDEEDG
TKYRRRVISLETKLDILKRKEDGERICELAREYGLAKTTISSIIRNSEAI
KLSSFGPNKAKKMREMELILSSWIKEQNEAKEILSGPAIQDMAREIWADI
EGPDNEDGSKAFVASDGWFKRFRQRFNLLPESVKXEEKL back to topmRNA from alignment at LSalAtl2s729:47426..53045- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000010910-706757 ID=EMLSAT00000010910-706757|Name=EMLSAT00000010910|organism=Lepeophtheirus salmonis|type=mRNA|length=5620bp|location=Sequence derived from alignment at LSalAtl2s729:47426..53045- (Lepeophtheirus salmonis)
ATGGATGATCACTTCACTCTCCAATGGAATGACTACCAAAACCATTTAAT
GAACGCTTTTACAAGTCTTCGAAATGACAAGGATTTCGTAGKCCTGACAT
TATCTTGTGAGGGCCGTAAAATTAGTTCTCACAAGATGTTATTGAGTGCC
TGCAGTCCTTACTTTCGAGGCTTACTCAAGGACAATCCCTGTCCTCATCC
TGTTATCATACTTCGACAGACTTCTTACGAGGATCTTGTTGCCATAATTC
ATTTCGTGTACAATGGTGAAGTCTCCCTTCATCAATCCCGGGTTAAGAGC
TTCATCAAAACGGCGAAAAGTCTCAAAATACGAGGTTTATGTGAAGCGAG
CGAATTTGGGGAGGAAGAGGAGGAAAGTGTTCCCAGTCATGAGGATCAGC
CACAGAGGAAAAAGGTGAAACTGGAGGATGAGGAAGATGAATTTGGCAAG
GATTGGACATTTGACTACGGAGGGAGMGCGGGGGACATCCCTGATGAATC
TTCCACTCCCAATGCTGTTATCGCTGAAGGTAATTAACATTCACTTCACT
CCTTCTTGACTCTCTTTCCCTTTCTTCCTATTTACCCTATTTACTATTTA
GTAGTTTCTTTGCAATTCAATTCTCTCTTCTTTATTGGCGAATTTTATAT
TTCATTTGTGTACAAGATTGTTTTGGGCATCATGAAGTTTGTAGGCAAGG
TATTACTAGCATTGGATTGCAGTTACTTTGATAATCAGAATCTAGACTTT
AGATAATGCATTGATATTGACGACACGGATACTTAAATACAATCGTTGAA
AGGTTTTTACTCAAAAGAACCCTATATGATCCAACGGTTATATATAACTG
CAATGTTGGAAATATGTTTGCTCATAAACGATTTCTTGGTATTCAACACC
TGCATTAATTGCTGTGTCTTCTTACATAACAATTTAGTATGTGCGAATTT
AAATTATCCCCTTCAGTATCGTGGATGGTGGAGAGAACACTATTTTGTGT
CTTGCTTCTCACGAATAAATATATATTGAGATAGATATATGACTTAGTTT
GAGTGGAGCTTTAACTTAATATCTTGTTGGTTCAATATTTGAATTAATAT
TATGAATCACTGCTTACTTTTTTCAAATAGTAATGATGTTCTCAAGATGG
TTGGTAAATTTTAATTATGATTGTAAGAAATTTTATGTATTGTTGCGGCC
TAAATGTAATCAACTACTTAAAAACACATCGCCTTTAATGTAATTCTTGA
AAGTTTAAGTTCTTTTCTCTTCGAAAACCTTTGTTGGGACCAGTTTTATT
GACAAGAATCCCCTTTTTTCTGTGTTTTATAGTCGAACGAGAGGAGTTCA
TTGATGTTAATCAGTCATTGTCAAAACGGTCTAGAAGCTATCAACGACGT
TTTTTAACCAAGTGGATGAAAATCCCTGAGTTTGCGGAATGGTTGATGCC
TTATSATAAGGACCCTGGGCGAGCTCTTTGTTCTATATGTGATAAAACGG
TTCCAGCAAAGATTTTTGATATTCGTTGTCATGGTAATTCGAAAAGACAT
GCTAAAATGGCTCAAAGTTTATTGACTAAGCCTGATGTAACTGTACTTGG
TGAAGATACAGCTGTCGTTTTGGATACGGATGATCATAAAACGATAACAA
TACACCATCATGACTCAGTTACTGTTGCTGAAGATGAAGAAGAAATTCGT
AGAGCCTTGGTGGCTACTACTTCTAATACTGGTGKCCTTGAAGCCAGTGA
GATTGAACCAGATGGCGGTGTTAGTGTTGATGATCACACCTCTCCAATAC
ATATTGTTCCAATTGAAGGAGAAATTCAAGAAACTTCACATGATTCAAAA
AAGGATGAACCTGGTGATGTCGATGATGCTCAATCAAAGGCAGAAAAGAA
ATTTTTTAATATAAAGTAGATCTGACAATTTTTTTTTCTGTAATTTGACC
TCATTGTTTCAAGGCTAGAATGTAAAAAACAATGAATATTTTTGTACCCT
TCTCTGTTTTTAAATAGATTTTGGTAGAGTCTTCATTTTTTGAAATGAGA
TAAAAGTTGCTTTGATGAAATAAAAATATTTATTTAAATATTATCTTTTT
ATTTATCATTTAATGATGATTATGTTGAATTTCTGAAATAAATCGTCATC
TTTGACTAATCATGTTTTGTTTTTATCATAGAACCTCCTCTCCTTAAAAG
GTCTCATTATATCTTTATCGCACTTGATTTCTCTCTCCCTTTCATATTAA
TATACAAGTTTTCTTTGTATTTAGCATTCATTATGNNNNCTCTTGTTGAT
TCAATTCCCTGATAGATTAAGTTTGTGGCATCATATTTCCGATGTTCATT
AATTACCACCATCGTTAACGTTCTATGTCAATATCCTACTTAATATTAAT
GAATTAGAATTTTTTACTCATAATACTAATTATCTTGACGTTATGTGTTA
GTAAGTCCCAACTTTTTTTTTTTAAAGTTCCTCTATATGCTACGACTTTA
TGAAATGATTATGATTTATGCTAAATGGAGTTACGTACTAGATTCAAATC
CTTCTCCCCACTTTTTTTTCGTAGGTGCAATTAGAGTATGTAAAATTGTC
CCTCAAACTAAACGATACGCTCAAAAATTTCGTGATAAGTGGCTAAACGA
TCCAGAATTTGAACCTTGGCTTTCTCGCCATGAATCTGATCCTGAAAAAG
CTGTTTGTACCGTTTGTCGTAAAACACTAAATGCAAAACTCTATGATCTT
AAACACCATTCACGTAGTATGAGGCATCGAAGAAATTCTATTATGGAACA
AGGAAGTGGCGGACTGACCGAGGATACGCCTGATGAGGAGAGAATATATC
AAACTGAGGAAATAATTATAAAAACAACTACTTCTAATGATAATGTTGGA
ATCAATGATGATATTCAAGGTTCAATCGGAGGGGGTGATAGTGAGACTAT
AAATTCTAAGGATGTTACATTAACTCATGAAACCTCAACTGTTGAAATTA
CGACTGCCTTGAGTACTTGAAAATAAATTTATGTCTATGTATATACATAT
ATATCCAGACATTGTATACTATCAGTTTCGATCTTATTTATAGCGACTTT
GTTTCCTTGATTAATTTCCTGTAATAAAGTATGATTTATGTATTTAAAAA
TTAAATATTAACAGATGAGCATTTGTTTTATTTATGTCTTGAGAACATCT
TGAGTTCATCATCAGTAGTATGTATGTCAGTCGGGTTTGCTCTCCATCCT
TCAAAAAAAAGTCTGTATTTTTAGTTTAATTATTTGGAAAGATAAATCAA
AAGTATGTGTTTCGTTATAATCGGAGTAATATTTAATATAGGATCAGGAT
CAGGAACGGTTCACAAAAGAAGAGCCATTTCGATTGAAACAAAAATGGAT
ATAATAAAACGGAAGGAGCAAGGAGAACGGACATGTCAAATCGCTCAAGA
TTATGGAATAGCCAAGTCTACTATATCTACCATTCTCAAAAATGGGGAAT
CTATTAAAAAACTCAGTGCAATCCCTTCAATGATGGGAGCCTTCTATGAC
ACAAGAAGATCCAGAAGTGGAAAGATGCACGAAATGGAAAGGATCTTAAA
TATGTGGATCGAAGATCAAAATAGTTCTAATCAAATTGTCAACGGACCCA
TTATTCAAGAAAAGGCTCGAGAGATATGGGTGGACATCGGAGGCCCCGAT
GACGATGAGAGTAAAACATTTGTTGCGAGTAATGGATGGTTCGAGAGATT
TAGAAAGAGATTTAATTTACAAATGGTTAAGAATGTTAGTACAAGAGATA
CCTTCAAAATGCCTGTTTAAAAAAGTTTATATCCAAGTCCGTCGTTAATG
ATTATTTTTTCTGTATCATAGTCCTTTTATATATACATACATTATATATA
AAGAAATTATTTCATGGTCCTTGTATTTATATATATATATATATATTAAT
ATAATATATAGTTAAGCATTTGTTTCTTAAACACGGTGATTAGGAGACAC
TTTATTTTATGGCTTGGCTTTTGTAACGTTTATGATAATGATTGTTATAA
TGATAATTTTTATAGTCCTGGATTTGCTATGATTACTAAGTGGTCAACTC
ACTGACTAGCATAGAAACATTGTATTAATTTTRCTGATGTTTTTAACTCG
TTAAATTATATTGAGAGAATTTAAAAAAATATAATATATTATATATATTA
ACGGAATTACGGATGTAGTAACAATGATCACAGAGTTATGTGTATATTAT
TTTTTGGCTGGGTTAATTCAATTTATTATTAAATTTATTCAATCTATTGA
GCAAACATTTTTGTACATACTTTACCCATAGGTCGTCCAACCTCTCAGAA
ACGAAGAGCCATTTCTTTAGAAACCAAGTTAGACATTTTAAAGCGAAAAG
ATCGTGGGGATAGAAGTACTGATATTGCTAACGCCTATGGATTCGGAACT
TCAACCGTTTGTACTATACTCAAGAACAGGGATCAGATCCTTAAACTGAG
TAGTATTCCTTGTATGATGGGTTCCTTTTATGATACAACGAGGACTAGAG
GTGGTAAAATGCATGAGATGGAACGCATACTCAACACTTGGATTCTTGAA
CAAAATGAAATGAACTCAGTCCTTAATGGACCAGTCATTCAAGAGAAGGC
GAGGGAAATATGGGTTGATATAGGAGGACTAGATGAAGAGGACGGTAAGA
AGTTTGTTGCAAGCAATGGCTGGTTTACTCGGTTTCGAAAGCGTAATAAC
CTTCAAATTGTCAAAAATATTGGAAGATCAGACAATAATGCATCATCAAC
AGGATCCGCATCATTTTCCTCATCTTAAACTAAAATTGATTCAATGAAAT
AAGTTCCATGTCAAAGCTCTTCCTTCCTCATTATTGTAAAGAAAAAAAAC
CATCATTTTTTATATACCTATAATGCAATCTCTATATATGTATGTATAAA
TGTGTATCATGAATTCTTACTTATCTTTAATGAAAGAAGACATATTGTAT
TTCTTTACTTATCCTGACTTACAGAACTAGTGATGTCCCAAATACATATA
TGTATGTATATAACTTTTATACCTATAACCATTGTGATTGATTCAAAGCG
ATGAGGGAGGGATTGAGCTCATTATTTATATTAATTAAGACACACAATTG
ATTCACCTTTTTGAGTAGATAATAATCAATGTTAAATACATGATATAGGA
ACTAAATATAGACGAAGAGTAATTTCTCTCGAAACGAAATTGGACATCCT
CAAACGCAAGGAAGACGGGGAACGCATTTGTGAACTTGCTAGAGAATATG
GACTAGCTAAAACCACTATATCAAGTATTATTAGAAATAGTGAAGCCATC
AAACTATCGAGCTTTGGACCAAATAAAGCCAAAAAAATGAGAGAAATGGA
GCTTATCCTCAGTTCATGGATTAAGGAACAAAATGAGGCCAAAGAAATTC
TTAGTGGACCTGCAATACAGGATATGGCGCGCGAAATTTGGGCTGATATT
GAGGGTCCGGATAATGAGGATGGAAGTAAAGCTTTTGTTGCAAGTGATGG
ATGGTTCAAAAGGTTTAGGCAAAGGTTCAATCTTCTACCAGAGTCTGTTA
AATKCGAGGAAAAATTATAA back to top
|
