EMLSAT00000010968, EMLSAT00000010968-706815 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000010968
Unique NameEMLSAT00000010968-706815
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: no visible phenotype
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort ascending
AR F249 EMLSAT00000010968 EMLSAG00000010968 female
  1. PreAdult2
No visible phenotype
no visible phenotype
16.08.2018 - 09:00
20.09.2018 - 09:00
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s735supercontigLSalAtl2s735:89985..91812 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000010968 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000010968EMLSAG00000010968-693734Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000049039EMLSAE00000049039-757967Lepeophtheirus salmonisexon
EMLSAE00000049040EMLSAE00000049040-757968Lepeophtheirus salmonisexon
EMLSAE00000049041EMLSAE00000049041-757969Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771873auto771873Lepeophtheirus salmonispolypeptide
EMLSAP00000010968EMLSAP00000010968Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000010968

>EMLSAP00000010968 ID=EMLSAP00000010968|Name=EMLSAP00000010968|organism=Lepeophtheirus salmonis|type=polypeptide|length=320bp
MDLKSGIIALTLFFTLLQFTLGNEVNQRNCPSGYQYAGEDSSNNRIVSSF
NKGFVYYEEVSRSDIYSCYKYIPSKSENDVTYFDAVKGCSDEENHVENKA
RLISFDDDFNEIQRFANILSSYLNGSSSKILTSGLKLPNYSTFVWSSTNE
MYNISEAFIQIQNKTDPKLACLALSINSPHDFTLEAIDCANTNIKTYVCE
VRVQIVTFYAWFVNNSWNLVLLFSISILGIGLCMSGFAYRSSPRFERRVQ
RRPGNVSPGGPNISKIDAPPPYESFVNAQCAHEGLPPKYDSNAQAPSRLE
QIKNKGKDILATVTVFKTRY
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mRNA from alignment at LSalAtl2s735:89985..91812-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000010968-706815 ID=EMLSAT00000010968-706815|Name=EMLSAT00000010968|organism=Lepeophtheirus salmonis|type=mRNA|length=1828bp|location=Sequence derived from alignment at LSalAtl2s735:89985..91812- (Lepeophtheirus salmonis)
ATGGACTTAAAGTCAGGAATAATTGCTCTCACTCTATTCTTTACACTACT TCAATTCACATTAGGGAATGAAGTTAATCAGAGAAGTACGTATACATTGT TTTCCATAATTTAAAATAACCTTGGTTGATATATATATGAAAATTAAAAT TTTTAGGTATTACTTAATTTTAGACCTTGTCTTTTTATTAAGAACTTCTA AGCTGGTCCATGAAGATACGGAAACTTATTTATTACTAGTATGAATCATG GCCTCTCCAACTTCCCCTATGGTGGTGCCTCTGATTGTACCATACCATTA ATTATGATGTAATCTTTTTGACTGTTTGAGAAAAAGGACCTTTTTGCATT TGTCTCTAGTCTCTTTTACATATACATATTAGCCATATTTTTTGTATATA TAATTTKTCATGATTYAATNTTTATAAAAATGACGAATTCAACTTTCTTT TTTTTTTTTTTTTTTTTTGTAAGGGATAACGTCATTTAAATGAGATAAAA AAAATACATACCATGACATAATAATAAATATGTTTTGATTAAACCACAAA TAATATGTCGATAAGTTACATCATAGAAAACAGTACTTGTTGCTCTATGA ACTATTTTTTAAAAAATACATGGAACACCGAATACATATACTTCTATGTA TTGCAATTAATTTCCTTTGTTGGGATATTTTCTTATCTTATCCCACTTAT AAGTACATAACATCATTGAACATTGATCATTTATTCCTCTATAAATAAGA AATAAAGTATTGCACCTGTTTATATAACATGAAAACTTTTATAATGATAA ATATGAGATAATCAATTATTATCTGTTCAAATTCATACGTTTTATTTAAA TTCCTAGATTGTCCTAGTGGATATCAATATGCTGGAGAAGATTCTTCAAA TAATAGAATCGTAAGTTCATTTAACAAAGGATTTGTATATTATGAAGAGG TGAGTAGATCAGATATATACTCGTGCTACAAGTATATCCCCTCCAAATCC GAAAATGATGTCACTTACTTTGATGCTGTCAAAGGTTGTTCTGATGAAGA AAATCATGTGGAAAATAAAGCTCGACTCATTAGTTTTGATGATGATTTTA ATGAAATACAAAGATTTGCGAATATTCTATCTTCTTATTTGAATGGATCT TCTTCTAAGATCCTCACGTCTGGACTAAAGTTACCAAATTATAGCACATT TGTTTGGAGCTCTACAAGTAAGTGTCGTCCAACTTTGATTTCATTTATAA TACATATTATGTATCAAGTTACTGAATCCAAATGATTAAATCTTTAATAT ACTTATATAGATGAAATGTACAACATCTCTGAGGCTTTCATTCAAATCCA AAATAAAACTGACCCAAAATTGGCATGTTTGGCCCTGTCCATTAATTCCC CACATGATTTTACTCTTGAAGCTATTGATTGTGCAAATACGAATATTAAA ACATACGTCTGTGAAGTGCGCGTTCAAATAGTAACTTTTTACGCCTGGTT TGTGAATAATAGTTGGAATTTGGTTCTCTTATTTTCAATCAGTATTTTGG GAATTGGTTTATGTATGTCTGGCTTTGCTTATAGATCCTCACCAAGATTT GAAAGGCGAGTGCAAAGGAGACCGGGAAATGTTTCACCTGGAGGACCAAA TATTAGTAAAATTGATGCTCCTCCACCATATGAAAGCTTTGTTAATGCTC AATGTGCCCATGAAGGACTACCTCCAAAGTACGACTCCAATGCACAAGCA CCAAGTCGTTTGGAACAAATAAAAAATAAGGGAAAAGATATCCTTGCCAC TGTTACTGTTTTTAAAACAAGATATTAA
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