EMLSAT00000011036, EMLSAT00000011036-706883 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011036
Unique NameEMLSAT00000011036-706883
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s743supercontigLSalAtl2s743:94413..95794 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011036 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011036EMLSAG00000011036-693802Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000049330EMLSAE00000049330-758258Lepeophtheirus salmonisexon
EMLSAE00000049331EMLSAE00000049331-758259Lepeophtheirus salmonisexon
EMLSAE00000049332EMLSAE00000049332-758260Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771972auto771972Lepeophtheirus salmonispolypeptide
EMLSAP00000011036EMLSAP00000011036Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011036

>EMLSAP00000011036 ID=EMLSAP00000011036|Name=EMLSAP00000011036|organism=Lepeophtheirus salmonis|type=polypeptide|length=292bp
MNTLTAFATLLVIGFTQGGFVSPYYRYGFPVYAPYANYAHAVNVPSPHIT
EHKVHNIEAPKNVANEYVSPYMAYFPSPHVASYAAPLAKSYVPVVKNEEH
KVXEESKDVSTFVSPYNAYFLXPSYAPSVKTLKKVVKKVTPFKAVTHVSS
YAAPHVPAIAPTVKNTPVNFAPHHALNYVSPYAAPVAGQFYAAGFGYPAS
SQFHSQDELGNLQFGYSNINSAKYEQGNTYSGVNGGYQYVDANVDSRLPA
APLKAPVFERKPVSDTPAVVAAKAEFKKAFDTAKAAAAVQSA
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mRNA from alignment at LSalAtl2s743:94413..95794+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011036-706883 ID=EMLSAT00000011036-706883|Name=EMLSAT00000011036|organism=Lepeophtheirus salmonis|type=mRNA|length=1382bp|location=Sequence derived from alignment at LSalAtl2s743:94413..95794+ (Lepeophtheirus salmonis)
TGAATACATACAATTAATAACAAATACCATTTTTACCTTAGGTATATTCA AAAATTGAATATGATAAATATTTGATTTAAAAAAAATATATATATTTCTT TGTTCAATAGCAATAATAAAAAAGTTTTTTTGATAAGTCAGTTAGAAGGC TGGTCTAAAAACCCAGACGAACTTATTTTTTGAGACACCGAGGGTCAAAT GAAGCGAGTTATTATTTTTAATAAAATTTCTATGAAGAAATCAGTTTCGT TTAGCATCTCAAAACAAACAGAGCCATATATACATTGAAATGAATACCTT AGTAAGTAGACACTTAAACNNNNNNNGAATAGAAGTATATATTTGTGTTT TAACAACCTTTTTCTATATTTTTAGACTGCTTTTGCAACTCTATTGGTCA TTGGATTTACACAAGGAGGATTCGTCAGTCCTTATTATAGATATGGGTTT CCAGTCTATGCTCCATATGCCAATTACGCTCATGCAGTTAATGTCCCATC ACCTCATATAACTGAGCATAAGGTCCACAACATTGAAGCACCAAAGAATG TAGCAAATGAATATGTGTCACCATATATGGCCTACTTTCCATCCCCCCAT GTGGCTTCATATGCTGCTCCATTAGCTAAATCATATGTTCCGGTTGTCAA AAATGAAGAACATAAGGTTGWAGAAGAATCTAAAGATGTATCAACGTTTG TTTCTCCATACAATGCATACTTCCTTRCTCCATCTTATGCTCCTTCTGTA AAAACTCTAAAGAAGGTTGTGAAGAAGGTTACRCCATTCAAGGCCGTTAC TCATGTTTCCTCATATGCTGCTCCMCATGTTCCTGCCATTGCTCCTACAG TTAAAAATACACCAGTCAACTTTGCTCCACACCATGCCCTCAATTATGTT TCACCCTATGCTGCTCCTGTTGCTGGCCAATTTTATGCTGCTGGATTTGG ATACCCAGCCAGCTCTCAGTTCCACTCTCAAGATGAATTGGGAAACCTTC AATTCGGATACTCCAACATCAACTCTGCTAAATACGAACAGGGAAATACT TATTCGGGAGTGAATGGTGGATATCAATATGTTGATGCTAATGGTGTTTT GCAAACTGTCACATATGTTGCTGATGATTTNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNTTTAGAACAGTCGACTCCAGATTACCA GCTGCTCCCCTTAAAGCTCCAGTTTTTGAAAGAAAGCCAGTCTCTGATAC TCCTGCTGTTGTGGCTGCTAAAGCAGAATTCAAGAAAGCTTTTGATACGG CAAAGGCTGCTGCCGCTGTTCAATCAGCATAA
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