EMLSAT00000011174, EMLSAT00000011174-707021 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011174
Unique NameEMLSAT00000011174-707021
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s760supercontigLSalAtl2s760:111083..111421 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011174 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011174EMLSAG00000011174-693940Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000049950EMLSAE00000049950-758878Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772430auto772430Lepeophtheirus salmonispolypeptide
EMLSAP00000011174EMLSAP00000011174Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011174

>EMLSAP00000011174 ID=EMLSAP00000011174|Name=EMLSAP00000011174|organism=Lepeophtheirus salmonis|type=polypeptide|length=112bp
MSNLVLIGLGLAGVGVLGRFASRALPSVSKKFEATVKSIETTNWANSKYY
KGGFDSKMTKREAALILGVSPSAPPKKIKDSHKKIMLLNHPDKGGSPYLA
AKINEAKDFLDK
back to top

mRNA from alignment at LSalAtl2s760:111083..111421+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011174-707021 ID=EMLSAT00000011174-707021|Name=EMLSAT00000011174|organism=Lepeophtheirus salmonis|type=mRNA|length=339bp|location=Sequence derived from alignment at LSalAtl2s760:111083..111421+ (Lepeophtheirus salmonis)
ATGTCCAATTTAGTATTAATTGGCTTAGGACTTGCTGGAGTTGGAGTACT
TGGTCGATTTGCTTCTAGGGCACTTCCTTCCGTTTCAAAGAAGTTTGAAG
CCACAGTGAAATCCATCGAAACCACGAATTGGGCCAATTCCAAGTACTAT
AAAGGAGGATTCGATTCCAAGATGACGAAACGTGAAGCTGCATTAATCCT
GGGTGTAAGTCCTTCTGCCCCACCTAAAAAAATAAAGGATTCTCATAAGA
AGATCATGCTCCTTAACCATCCGGATAAAGGAGGATCTCCATATCTTGCT
GCTAAAATCAACGAAGCCAAAGACTTTCTGGATAAATAA
back to top
Add to Basket