EMLSAT00000011382, EMLSAT00000011382-707229 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011382
Unique NameEMLSAT00000011382-707229
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: no visible phenotype
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort ascending
AQ F374 EMLSAG00000011382 EMLSAG00000011382 female
  1. PreAdult2
No visible phenotype
no visible phenotype
16.04.2018 - 09:00
23.05.2018 - 09:00
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s787supercontigLSalAtl2s787:151737..156042 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011382 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011382EMLSAG00000011382-694148Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000050882EMLSAE00000050882-759810Lepeophtheirus salmonisexon
EMLSAE00000050883EMLSAE00000050883-759811Lepeophtheirus salmonisexon
EMLSAE00000050884EMLSAE00000050884-759812Lepeophtheirus salmonisexon
EMLSAE00000050885EMLSAE00000050885-759813Lepeophtheirus salmonisexon
EMLSAE00000050886EMLSAE00000050886-759814Lepeophtheirus salmonisexon
EMLSAE00000050887EMLSAE00000050887-759815Lepeophtheirus salmonisexon
EMLSAE00000050888EMLSAE00000050888-759816Lepeophtheirus salmonisexon
EMLSAE00000050889EMLSAE00000050889-759817Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773372auto773372Lepeophtheirus salmonispolypeptide
EMLSAP00000011382EMLSAP00000011382Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011382

>EMLSAP00000011382 ID=EMLSAP00000011382|Name=EMLSAP00000011382|organism=Lepeophtheirus salmonis|type=polypeptide|length=1138bp
MDPIPTPKSFPFPYDEPYPIQKDFMKSLFRCLDNGKLGIFESPTGTGKSL
SLICGTLLWFKQREEARKKYLKNKIEEKSDVNSDGEEDWFSVALRNRAKN
EEKLEYKLELKFLEEKQQRLEEIRQKSKLKKDVQFHHYYEKKGSSMSDIN
ENEDEDHDLVLNDYSSGEEDGGEENYPPEDQVDYSQRIYYCSRTHSQLSQ
FVKEVKKSPYADSIRLISLGSRKNACINDSVRKLKHNASMNEKCIDLQKG
LQKTQVDKDKRASKKKKTTNGCPFYSQIRIEALKNMALTQISDIEDLVSK
GKKTQTCPYYSSRHASEDAELVVIPYNTLLHKSTREACGIKLKNSVLIID
EAHNLLETIAHIHSCEIKGSHLKDIKFQLQGYLEKFRTRLKPRNILYIKQ
LIFIVTNFIKVMTSSQILTTMAFLQDSQIFNIDLFKILQYILKSKLSYKL
RGFSQKYSNEAQKPSNTQTFLNSMKKNYKEESPAQGVRPETESDHSDGPS
QINILFSFISNLVEDLDDGRVVITHSNDFSGSSIKFILLNPTNHFKDLVK
ECHSIIVAGGTMEPVDEFKKRLFISSGATTERIHHFSCGHIIPESNILPI
VLHRGPSGKLLDFSFSLRDLKETYEEILRILSNLVTIIPGGIVVFFPSYH
YETKVHAFLSKSSTWNNLVAKKRSYIESPRIQMQWKSVVGGKMSEGINFS
DDMGRCVLMIGLPFSNSKSPELKEKMEYLNRTEGSNAGNSYYENSCMKAV
NQSIGRAIRHGNDYATIILADHRYSRGNIHELLPGWIRDKVWNSDKFGPV
VPRIRQFFKILLHQYRLYLLKMSRKREAEGSSEQRLXTHLGPAPFDSDKX
AAIERESQDYSIKITLDMARSGLSPRKVRVYADGIYDLFHQGHARQLMQA
KNVFGPRTEVYLLVGCTSDELTNKRKGKTVMSEEERYEAIRHCRYVDEVV
RDAPWECDDDFLSFHKIDFVAHDEAPYVTESGSDVYAALKEKGMFVATQR
TDGVSTSDVVARIVKDYDKYIRRNLARGYTRQDLNVSFFHGNRLKLGIKV
DEVKEKTKGFIERKKEEYASKIEVTSKELIGTFMALFGARDWNFDQFWAH
SKERLSHALSPPASPSRNEDDDYDEDQPQPKRVKIDLS
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mRNA from alignment at LSalAtl2s787:151737..156042-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011382-707229 ID=EMLSAT00000011382-707229|Name=EMLSAT00000011382|organism=Lepeophtheirus salmonis|type=mRNA|length=4306bp|location=Sequence derived from alignment at LSalAtl2s787:151737..156042- (Lepeophtheirus salmonis)
ATGGATCCCATTCCTACTCCAAAATCATTTCCTTTCCCATATGATGAACC CTATCCCATACAAAAAGACTTTATGAAAAGCCTTTTTAGATGTCTGGACA ATGGTAAGTTGGGAATATTCGAGTCTCCAACTGGAACTGGAAAATCATTG AGTTTAATTTGTGGGACCCTTTTGTGGTTCAAACAAAGGGAAGAAGCTCG AAAAAAATATTTGAAAAATAAGATTGAAGAAAAATCTGATGTAAATAGTG ATGGAGAAGAGGATTGGTTCTCTGTGGCGCTTCGAAATCGTGCAAAAAAT GAGGAGAAATTGGAATATAAATTGGAACTCAAGGTATTAATGAAAGTACT TCATGATTTAAGTTGTGCCCTTAATCCTTTAATGTGGTAATCCTTAGTTT CTTGAAGAGAAACAACAAAGACTCGAGGAGATACGGCAAAAGTCGAAATT GAAAAAAGACGTTCAATTTCATCATTATTATGAGAAAAAGGGATCCTCCA TGTCTGACATTAATGAAAATGAGGATGAAGACCATGACTTGGTCTTGAAC GATTATTCTAGTGGCGAAGAGGATGGAGGAGAGGAAAATTATCCGCCTGA AGATCAAGTGGATTATAGTCAACGAGTAAAAATAAAATCATAAATCAGGA TATTGTTTTAAAAACTTAATATGATTCCTAGATATATTATTGCTCCAGAA CCCATTCACAACTCAGTCAATTTGTCAAAGAAGTCAAAAAAAGCCCTTAT GCGGATAGTATTCGCTTAATTTCCTTAGGTTCTCGGAAAAATGCCTGTAT CAACGATTCAGTCCGGAAGTTAAAACATAATGCTTCCATGAATGAGAAAT GTATCGATTTGCAGAAAGGTTTGCAAAAGACTCAAGTCGATAAGGATAAA AGGGCATCAAAAAAAAAGAAAACTACAAATGGATGTCCCTTTTACTCACA AATAAGGATTGAAGCCTTGAAAAACATGGCGTTGACTCAAATATCGGTAA AGGATTTGTTTTTGTACCATAAGTTTGTATCATAATACTAACATATTATT GACTTAGGATATAGAAGATTTGGTTTCCAAAGGTAAAAAAACTCAAACAT GTCCTTATTATAGCTCTAGACATGCCTCGGAGGATGCTGAGCTAGTTGTG ATTCCCTATAATACTCTCCTACATAAGTCAACCCGTGAGGCATGTGGCAT TAAATTAAAAGTAAGTGTAAATCACTGTATTAATTATGTGTATCTGACTA TGAAAATAATTTTTTCTAATTATTATTTTGAAGAATTCTGTGCTTATCAT TGACGAAGCACACAATCTCCTGGAAACAATAGCTCATATTCACAGTTGTG AAATCAAAGGAAGTCATTTGAAGGATATCAAATTTCAATTACAGGGTTAC CTCGAAAAATTTCGGACACGTTTGAAACCCAGGAATATACTCTATATCAA ACAATTGATATTTATTGTGACAAATTTCATCAAAGTCATGACTTCAAGTC AAATTCTTACAACCATGGCCTTTTTGCAAGATTCTCAAATCTTTAATATT GATCTTTTTAAAATCTTGCAATATATATTGAAGAGCAAATTATCTTATAA ACTCCGAGGATTCTCTCAGAAATATTCAAATGAAGCTCAAAAACCCAGTA ATACTCAAACTTTTTTAAATTCGATGAAAAAGAATTACAAGGAAGAGTCT CCTGCTCAGGGCGTTCGCCCAGAAACAGAGTCAGATCATTCGGATGGACC ATCGCAGATAAATATTCTATTTAGTTTTATATCCAATTTAGTAGAAGATC TTGATGATGGAAGAGTTGTGATTACTCATTCAAATGATTTCTCTGGTTCA TCCATCAAATTCATCCTACTCAACCCTACTAATCACTTTAAGGACCTCGT AAAGGAATGTCATTCCATAATTGTTGCTGGAGGCACAATGGAACCAGTAG ATGAATTTAAGAAGCGTCTTTTTATATCATCAGGGGCAACTACGGAGAGG ATACATCACTTTTCGTGCGGACACATAATTCCAGAAAGTAATATTTTACC TATAGTTCTTCATCGCGGACCTTCTGGAAAACTTTTGGATTTTTCCTTTT CCTTGCGTGATTTAAAAGAGACATATGAAGAGATTTTGAGAATTTTAAGC AATTTAGTAACAATTATACCAGGAGGGATAGTTGTGTTTTTCCCATCTTA TCATTATGAGACAAAAGTACATGCATTTTTAAGCAAGAGCAGTACATGGA ACAATTTAGTTGCTAAAAAAAGAAGTTATATCGAGAGCCCAAGAATTCAG ATGCAGTGGAAGAGGTGCTTAAGGCTTATTCTAATAGTGTTCAAAACTCG GATGGTGCAATTTTATTCAGTGTCGTAGGTGGTAAAATGAGCGAGGGKAT TAATTTTAGTGATGATATGGGGCGATGCGTTCTCATGATAGGCCTTCCTT TTTCCAACTCTAAAAGTCCAGAGCTAAAAGAGAAAATGGAGTATTTAAAT AGAACTGAAGGCTCAAATGCTGGAAATAGTTATTATGAAAATTCATGTAT GAAAGCCGTGAATCAGTCTATTGGACGTGCAATTCGACATGGTAATGATT ACGCAACAATTATTCTTGCGGATCATAGATACTCTAGAGGAAATATACAT GAACTGTTACCGGGTTGGATAAGGGACAAAGTATGGAATAGTGATAAATT TGGACCTGTTGTTCCTAGAATTAGACAGTTTTTTAAGAGTAAAAGTGTAT AATGCTATAATTTAATTTGGATTGGAATACATCTATTTTATGTATGTAAC TTATTGGCAATTCATTTGTCTTTAACATAATATCAAATCATTTTAAAATT ATATACTGATGATATTTTGTAAATATGTAATTTCTCTTTCTTTCTMCCTT TCTCTTCAGCTGSGGAGCCACTATTTTCTTTGTGTATCTCCTCTAGAGAC ATAGTATAATTTAACTATCGTGATGGATGAAACACGAATAAAGGTATGCT AAAGAAAATAGCCTCATACCTCGAGTTCCACCTAAATGATTCCAAATCAA AAGTGTTTCCTTTGCACACTTGTGTAGTTTAGTCATGCGTTTCTGCTTAT TATTGTTATTATTTATACGCTTTTAATGATTTTGTCACGGTACGAAAACT CCTCATATTGAGTTTCAAGTTGAACTTTGCTCCTCAAGGAGGGCTGTCAT TTCAATATACTAGCTTTTCTAAATATTGTAAGACTACTACTATTAGTATT ACTACATCAATATCGTCTCTATTTATTAAAGATGTCTCGTAAGAGAGAAG CTGAAGGATCCTCAGAGCAGCGATTATSCACTCATTTAGGTCCAGCACCT TTTGATTCAGACAAASCCGCCGCTATTGAAAGAGAAAGTCAAGACTATTC TATTAAAATAACATTGGACATGGCTAGATCTGGATTGTCTCCACGAAAAG TTCGAGTGTATGCCGATGGAATATATGACTTGTTTCATCAAGGACATGCT AGACAATTGATGCAAGCAAAAAATGTCTTTGGACCTCGAACGGAGGTTTA TCTCCTCGTAGGGTGTACAAGTGACGAGCTTACAAATAAAAGAAAAGGTA CTTTCAGTCATATATTAATTATCCTTCACTTGAACTACTCCTCTCCTCTC ACTATTACACACATACAGGTAAAACTGTAATGAGTGAAGAAGAACGCTAT GAGGCCATTCGGCATTGTCGCTATGTGGATGAGGTAGTGAGAGATGCTCC TTGGGAATGCGATGATGACTTTTTGTCTTTTCATAAAATAGATTTTGTAG CTCATGACGAAGCTCCATATGTTACGGAGTCTGGAAGTGATGTATATGCC GCGCTTAAAGAAAAAGGAATGTTTGTAGCCACACAGAGAACGGATGGTGT TTCTACTTCTGATGTAGTAGCCCGAATTGTTAAGGATTACGACAAGTACA TACGACGTAACTTAGCTAGAGGATACACACGCCAAGATCTAAACGTTTCC TTTTTCCATGGAAATCGTTTAAAGTTGGGAATCAAGGTTGACGAGGTTAA AGAGAAGACCAAAGGGTTCATTGAAAGAAAGAAGGAAGAATATGCATCAA AAATAGAAGTGACATCCAAAGAGCTAATAGGCACCTTTATGGCTCTGTTT GGAGCAAGAGATTGGAATTTCGATCAGTTTTGGGCTCACTCTAAAGAAAG ACTTAGTCATGCACTTAGTCCACCAGCAAGCCCTTCTAGAAATGAAGACG ACGACTATGATGAGGATCAGCCTCAACCCAAGAGAGTAAAGATTGACCTC TCTTAA
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