EMLSAT00000011475, EMLSAT00000011475-707322 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011475
Unique NameEMLSAT00000011475-707322
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s792supercontigLSalAtl2s792:187038..188249 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011475 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011475EMLSAG00000011475-694241Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000051313EMLSAE00000051313-760241Lepeophtheirus salmonisexon
EMLSAE00000051314EMLSAE00000051314-760242Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774133auto774133Lepeophtheirus salmonispolypeptide
EMLSAP00000011475EMLSAP00000011475Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011475

>EMLSAP00000011475 ID=EMLSAP00000011475|Name=EMLSAP00000011475|organism=Lepeophtheirus salmonis|type=polypeptide|length=101bp
MATLSEIQILGSTVPMSLAHKNLEDIVIEGYKFPKGTIFVANLRKFHLDP
TVFENPQDFNPLRFYKKEADAQLVPFGFGKRICMGISMAKKELYYFFIMS
I
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mRNA from alignment at LSalAtl2s792:187038..188249+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011475-707322 ID=EMLSAT00000011475-707322|Name=EMLSAT00000011475|organism=Lepeophtheirus salmonis|type=mRNA|length=1212bp|location=Sequence derived from alignment at LSalAtl2s792:187038..188249+ (Lepeophtheirus salmonis)
ATGGCAACATTGAGTGAGATTCAAATATTGGGTAGTACAGTACCAATGAG
TTTAGCTCATAAGAATTTGGAAGATATAGTCATTGAAGGTTATAAGTTTC
CTAAAGGCACAATCTTTGTAGCAAACTTGAGAAAGTTTCATCTCGACCCA
ACCGTGTTTGAAAATCCCCAAGATTTCAATCCTCTTCGTTTTTACAAAAA
AGAAGCTGACGCACAGTTGGTTCCATTTGGATTTGGCAAACGGATTTGCA
TGGGAATATCTATGGCAAAGAAAGAGTTGTACTATTTCTTCATTATGGTT
ATTCAAAAATATAAGATAAGGCCATCATCAATCCATAAGTACCCAGATCC
CAATAACTTTAATTTTGGAACAACGTCTTGTCCAAAACCATTTTATGTCA
ATTTGTTGAAGCGATGAAATTTTATTACCAGACTACTTGAAACTAAGTTA
TTAGCGATGCATCAGTATGGGGTTCGGCAAGAATTGGCCTTTTTTGAAGT
ATCGTTATCGGAAACTAATTTTTTACATACTTCTAATTTGAAATTATGTA
TAACTAGTTATAATCATAATTATGTCTTTTCTTGTCAAGTTAACCACTAA
AAAAAGTAATTTCTTTGTTATTTGTATAGGCAATTATCTAATACATAAAA
ACAAACCTCAATCAATTTTATTATAACGTAATCCGATGAAATAGCAAAAC
CTTCTTTCACTTCTTAAGCTAGTTTACTTCAAATATGAGTTGTGTAGGGT
ATGATATCTCCTAAGGAATTAAATAACAAAAAGTATATTTTTTGAAATAG
AAATTAAATCACTTTTATAAATACCGACAAAAACAAAATACTGCACGCTA
AAAATCTTAAAATTTACATGCCCTACTCTTATATTAGTAGAATGGAAAAA
AACCGCACGCACTTATAATATTTAAGAATTCTTAAAAACCCCAAAAAATC
TAAAAAGTAACATGGTAGTCTCACAATTTAAAGAATATTTGGGGTAAAAG
CTGTTATTTTATTGTTAAAAAAGTGGGGTAACATACCTAGATATTATTTC
TTCTAAGGCCTAAAGTGTTTAAAAATTACTGGGATGATTTATTATAGTCA
TTTATGTACATAAATATGTGTAAGCGAGGCTTAAAATCATTACATTAATA
ATTAGTTAATTGCAATGCAGGTATACAAACATTTTAAATTAGTTATACTC
AAGAGTATTTAA
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