EMLSAT00000011506, EMLSAT00000011506-707353 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011506
Unique NameEMLSAT00000011506-707353
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s797supercontigLSalAtl2s797:247816..250315 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011506 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011506EMLSAG00000011506-694272Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000051446EMLSAE00000051446-760374Lepeophtheirus salmonisexon
EMLSAE00000051447EMLSAE00000051447-760375Lepeophtheirus salmonisexon
EMLSAE00000051448EMLSAE00000051448-760376Lepeophtheirus salmonisexon
EMLSAE00000051449EMLSAE00000051449-760377Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775248auto775248Lepeophtheirus salmonispolypeptide
EMLSAP00000011506EMLSAP00000011506Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011506

>EMLSAP00000011506 ID=EMLSAP00000011506|Name=EMLSAP00000011506|organism=Lepeophtheirus salmonis|type=polypeptide|length=265bp
MSEFESNSEPLKWKSFQLTYIEYVEGDLWGKILAVLSLSPLVIALFFMTA
FFIRRDLHTLTYGIVLACLFSASICTQQSEEESSKLQLSVYYETMCPYCR
RHILEDLHPTYTQLSDILDVQLVPYGNAKSSSRPDGTGYTFSCQHGPTEC
LGNMVHACAIKYVKFPILMDFIACMMERSDVPVLAGKECASKLEIEWTEI
EECSMSLEGEQLLFNNGEETNNLTPPKTVVPTDTLNGSQDDQEELIHNLK
QKICSSYPGPKPAAC
back to top

mRNA from alignment at LSalAtl2s797:247816..250315-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011506-707353 ID=EMLSAT00000011506-707353|Name=EMLSAT00000011506|organism=Lepeophtheirus salmonis|type=mRNA|length=2500bp|location=Sequence derived from alignment at LSalAtl2s797:247816..250315- (Lepeophtheirus salmonis)
ATGTCAGAGTTTGAATCCAATTCTGAGCCTTTGAAGTGGAAATCATTTCA
GCTCACCTACATTGAGTATGTGGAAGGGGATCTATGGGGTAAAATCCTTG
CTGTTTTAAGCTTGTCTCCACTCGTCATTGCCTTATTTTTCATGACTGCA
TTTTTTATTCGAAGAGATTTGCATACTCTTACTTATGGAATCGGTATTAT
TGTTAATAATATCTTAAATACCATATTAAAAAAGACAATTAAGGAGCCGA
GACCGATAAAACGTACAGAAATATTCGAAGAGTATGGAATGCCGTCTTCC
CATAGCCAGTTCATGTGGTTTTTCTATTTCTACTTTGTCCTTTTTATCAT
ATTTAGGTATTTTTATATTTGCTGTTAGCACAAAAACAATCTATGTGACA
AACAAAATCAGGAAAAGAAAAAATACCCAATTCATTTTTATCATATGTGA
GATATAGAGCCCAATATTTCATAGACATATTTGCATCAGTAATAAAACAT
ATATGCAAATTTCTGGAAGTATTTAAAATACCTAAGAATAGAAGTTATAG
TTTGAAAAATTTATTTTTATGACCCATTTTTCATCAAATCAATTTTGGCT
ACTTTAAGTACAATTTGCGACACACCATAATGGTTAATAAGAATTATTTG
TTGATAGATATGGGCGATAATTCGTCAAAAAATACCAACCAATGGTATCC
AGACTCAATTTTGATAAAAATCATTCTAGCTTGTTTTTGTGTTGACGAGC
CACAAAATATATATTATGTACACAATACTATATTTCTTTTTCAACTTTGT
AGAGTCCACCATCACAAGTTTGACTTTGTTGAGATGTGTTGGAAGATTTC
TTCAGTGGTCGGACTTGGAATCCTTACTATTCTCATATCTTATGGTCGAC
TTTATCTACAATACCATACTTTTCTTCAAGTTATTATTGGTGCCTTAATT
GGTGTTTCTTTTGCGTCAATATGGTTTTTTTTGACACATACGGTTTTTTC
AAAATATTTCCCCATGATTGCCTCGTGGAGAATATCTGAATTTTTTCTAG
TCCGTGATACTTCCTTAATACCCAATATATTTTGGTTTGAATATACATCT
GCCAGAGTGGAGGCTAAAAATAGATCTAAACGAACAGGAAAACCAAAGAA
TTCTTAACGCATTACTATTTATGATTAAAATACCTGTTTGTCTTTATTAC
TAAAATAAAACTAATTTTAAAATAAGAGTTTGTAATCTAGTTGATAAAAC
TTTAAAAAGCTACAATTGGGCTAAAGTTGCAATAACTTTATGGAATTTAA
TGGCTGAACTATTATTTAATCTTCTTATATTAGTACATATTGATATTGTT
GAATTGAATTAGTAAACCATACGCTAATTAAGTGTTCCTAGAGAGGAAGG
GGAATTAAAAGTAGGCTTAAGTGTTTGAACATGATTCATCAAATTTATTA
ATGAGAATATACATTTTTTTAATACATACCTTTAACTGATTAAAAGTTAC
TTACAAAGTATCGACTATATAATATTTTTATCTTACATTTTATCACAAAA
CTTGAAAAGATAAAATAATGCGTAACAAGAAATGCCTGTTGTTTTTTTTT
TTCAAAAAAATGTAAGGTTTTACTTTATTAAACCTTATCAGGGTTTTTTT
TCTATTTAAAAAGGTTATTCTATGCACAGAAAATAGTTCATAGAACGAAG
CTAACTTTATAACATTCAAATGGCATATCCAAGTCTTGCAATTTTAGTAC
TTGCTTGTCTTTTCTCGGCATCAATATGCACTCAACAATCAGAAGAGGTA
TGTCTTTTAAATACTATTAATACACTATAACTATAAATGTAAAATAACTT
TGAATTTGTATGTGAAGGAATCATCTAAATTGCAACTCAGTGTATACTAT
GAGACAATGTGCCCTTATTGCAGAAGGCATATACTGGAAGATTTGCACCC
AACATATACTCAACTGAGTGATATATTGGATGTTCAATTAGTACCATATG
GGAATGCTAAGGTAAGTCATTAATTTAATCAATCATGTAACAGTTCATTT
TTAATTGAAATTTATGTATTCATTTGTTTGGTAATACAGTCTTCTTCAAG
ACCAGACGGAACAGGCTATACATTTTCTTGTCAGCATGGCCCTACAGAGT
GCCTTGGAAATATGGTTCATGCCTGTGCAATTAAATATGTCAAATTCCCC
ATTCTCATGGATTTCATTGCATGTATGATGGAAAGAAGTGATGTACCCGT
TCTTGCCGGTAAAGAGTGTGCAAGTAAATTGGAAATTGAATGGACTGAAA
TTGAGGAGTGTTCCATGTCCCTTGAGGGTGAACAACTACTTTTTAACAAT
GGTGAAGAAACAAATAATCTAACCCCTCCTAAAACCGTGGTTCCAACGGA
CACGCTCAATGGTAGCCAGGATGATCAAGAAGAATTGATACATAATTTAA
AACAAAAAATATGTAGTTCTTACCCTGGGCCGAAGCCCGCTGCTTGTTAA
back to top
Add to Basket