EMLSAT00000011964, EMLSAT00000011964-707811 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011964
Unique NameEMLSAT00000011964-707811
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s84supercontigLSalAtl2s84:1368584..1370834 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011964 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011964EMLSAG00000011964-694730Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000053569EMLSAE00000053569-762497Lepeophtheirus salmonisexon
EMLSAE00000053570EMLSAE00000053570-762498Lepeophtheirus salmonisexon
EMLSAE00000053571EMLSAE00000053571-762499Lepeophtheirus salmonisexon
EMLSAE00000053572EMLSAE00000053572-762500Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780698auto780698Lepeophtheirus salmonispolypeptide
EMLSAP00000011964EMLSAP00000011964Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011964

>EMLSAP00000011964 ID=EMLSAP00000011964|Name=EMLSAP00000011964|organism=Lepeophtheirus salmonis|type=polypeptide|length=645bp
MEENKSSLVLTIGENYITKWKLEKQKKRLCNTALGRDLPECFPSISIDDL
PIIRNRKKSSSFPFNQTELFTNLIEQYDQYVSSTTNPSSTPPLLPNDNNL
CLSFFGYNNSSELCRNYSLSKQSIPCGPECWPAPFGTALTVLIAIFLAIC
IVITTFGNLLVLVSFVVERQIRQPPNFFIASLAITDVLIGTVSMPFYTIY
VLVGYWPDELGPMLCDLWLSVDYTVCLVSQFTVLSITIDRFCSVKFATQY
RTWRTGNKIMAVVVTIWVVSALLFFVSIFGWEHFIGKRDLLPGECMVQFL
KDPLFNTSLIIGYYWIPLVILIVLYSFIFQTAWTLSKKTRGKEKERQKCL
NMARKPLAAPSEALKTKSNPTNVREVRPTVLHITPVTNNTVAKTTVEKKA
TEIVSPDRCRGEKCIGHAAPCNHRRKKPGPSISMESKSTQISPTSLVSMY
QHYARTTKLKNVKKSSSHNXKSPXPAVLHIVVEDQSLEHRKVVMSELDSI
KKINASPKQEQTESDHRLAKEERITTSQFLTVKGKRSKVIVLKTIRKKLR
FRRRKKDKNMIENRAKKALRMISIILGAFVACWTPYHVIAILASFYPTAV
NIHVYMISYFLCYANAQINPFCYAASNQQFKNAFKRIMKGDFSIK
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mRNA from alignment at LSalAtl2s84:1368584..1370834+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011964-707811 ID=EMLSAT00000011964-707811|Name=EMLSAT00000011964|organism=Lepeophtheirus salmonis|type=mRNA|length=2251bp|location=Sequence derived from alignment at LSalAtl2s84:1368584..1370834+ (Lepeophtheirus salmonis)
ATGGAGGAAAACAAGTCCTCACTGGTTCTTACAATAGGAGAAAATTATAT CACAAAATGGTAAACAAATTAATACATTATTATCAACAATAATAGTATAA TGTAATATGTAGTCATGCCTATTATAAGATATAAATTTAGTGTTGCCCTC ACTGATGTAGAGGAAGACAAGTTTCTTCGTAAACTATTGTAGTCACGTTT CCTCTATTATTACAAAAAAAATTTATATATAATATAATGATAGGAAGCTT GAAAAGCAGAAAAAACGTCTCTGCAACACTGCTTTGGGACGAGATCTTCC CGAATGCTTTCCATCAATCAGCATAGATGATCTCCCAATCATAAGAAACC GCAAAAAATCATCTTCATTTCCATTCAATCAAACAGAACTCTTTACTAAC CTAATTGAACAATATGATCAATATGTATCCAGTACAACAAATCCTTCTTC GACTCCACCATTATTGCCCAATGACAATAATCTATGTCTCTCCTTCTTTG GGTATAATAATTCTAGCGAGCTATGTCGAAATTATTCCTTGAGTAAGTTA TTTTTACGTATACGTGAGTATAACTGAAATACCATCATAGATCATATCTT TTCTTTGTAGGTAAGCAAAGCATTCCATGCGGACCTGAATGTTGGCCTGC ACCATTTGGGACTGCTTTAACTGTACTTATAGCAATTTTTCTGGCAATAT GCATTGTTATCACAACATTTGGAAATCTCCTTGTACTTGTCTCCTTTGTT GTGGAAAGACAGATCCGTCAACCACCAAATTTTTTTATTGCCTCCYTAGC CATTACAGATGTCCTCATTGGTACTGTTTCCATGCCATTTTATACAATGT AAGAAAAATGAGTAAAAGCTATGTTTTTTAACTTCATTTTAATTTTAATA ATTCTGTAGTTATGTATTAGTTGGATATTGGCCAGATGAACTCGGACCCA TGTTATGTGATCTTTGGCTTTCAGTGGATTATACAGTATGCTTAGTCTCT CAGTTTACGGTTCTCTCCATAACAATAGACAGATTTTGCTCTGTTAAATT TGCAACCCAATATCGTACATGGAGAACTGGTAATAAAATCATGGCTGTTG TAGTAACGATTTGGGTGGTGTCAGCATTGTTGTTCTTTGTCAGTATATTC GGATGGGAACATTTCATTGGAAAAAGAGATTTACTCCCAGGTGAATGCAT GGTTCAGTTTCTCAAGGATCCACTCTTCAACACATCACTTATCATCGGAT ATTATTGGATTCCACTTGTAATACTTATCGTTCTATACTCCTTTATTTTT CAAACGGCATGGACCCTCAGTAAAAAAACTAGGGGAAAGGAAAAGGAAAG GCAAAAATGTTTAAACATGGCTCGAAAACCCTTGGCAGCCCCATCTGAAG CTCTAAAGACAAAATCTAATCCAACAAATGTAAGGGAAGTTCGTCCAACA GTTCTGCATATTACACCGGTTACTAACAATACAGTTGCTAAGACAACAGT GGAAAAAAAGGCAACAGAAATTGTGTCACCTGATCGTTGTAGAGGAGAAA AATGCATTGGACATGCTGCTCCATGTAACCATCGTAGAAAGAAACCAGGG CCAAGCATTTCAATGGAATCAAAAAGTACTCAAATCTCACCGACTTCTCT TGTATCCATGTATCAACATTATGCTAGAACCACGAAGCTTAAAAATGTAA AAAAATCCTCATCTCACAACRAAAAAAGYCCCTTSCCCGCCGTTCTTCAT ATTGTGGTCGAGGATCAGTCTTTAGAACACCGTAAGGTGGTAATGAGTGA ATTAGACTCAATTAAAAAAATCAATGCCTCACCAAAACAAGAGCAAACTG AATCAGATCACCGGTTGGCTAAGGAAGAAAGAATAACAACCTCTCAATTT CTCACCGTTAAAGGCAAAAGAAGTAAGGTGATTGTACTTAAAACGATTCG AAAGAAATTACGATTCAGACGACGGAAAAAGGATAAGAACATGATTGAAA ATCGTGCCAAAAAGGCTCTACGTATGATATCTATCATACTAGGAGCATTT GTTGCATGTTGGACTCCATATCATGTAATTGCAATTCTTGCAAGTTTCTA TCCTACTGCAGTCAACATCCACGTTTATATGATTTCCTACTTTCTCTGTT ATGCCAATGCCCAAATCAATCCTTTCTGCTATGCAGCAAGTAATCAGCAG TTTAAAAACGCTTTCAAACGAATCATGAAAGGAGATTTCTCGATTAAATA G
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