EMLSAT00000011986, EMLSAT00000011986-707833 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011986
Unique NameEMLSAT00000011986-707833
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s853supercontigLSalAtl2s853:248464..249877 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011986 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011986EMLSAG00000011986-694752Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000053673EMLSAE00000053673-762601Lepeophtheirus salmonisexon
EMLSAE00000053674EMLSAE00000053674-762602Lepeophtheirus salmonisexon
EMLSAE00000053675EMLSAE00000053675-762603Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775251auto775251Lepeophtheirus salmonispolypeptide
EMLSAP00000011986EMLSAP00000011986Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011986

>EMLSAP00000011986 ID=EMLSAP00000011986|Name=EMLSAP00000011986|organism=Lepeophtheirus salmonis|type=polypeptide|length=350bp
MASQFKYICLIALIGSAAAAGGPRARTLTVNREGKSLLNTFPFNDGARGT
ARAAHHEHDHAEHGHAHAEXPAASDNRLARQGGGDDVPLDIGSIAAAGER
CIDKVVMVEETEYDDHIECHHSYSERCHTTYSTDFEPQQEEECEENFKKS
CFIEYKKVAVDETVKFCHTPFICEGEGPEECKTVYESECETRYHEHDVED
DVVNCQTIQEEKCEDVTQGYTTEQKCTKWPKQVCTSEKKNVKKYSPITEC
KKVPRQLCGPSGCVPQPGPEECFDKKETIVQEVPEENCNLEPQKACKQVT
KLVPSLKPVEECVDVPKEVCSRSRKNPRKVQKPVVKKWCYVPSAASGLAA
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mRNA from alignment at LSalAtl2s853:248464..249877+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011986-707833 ID=EMLSAT00000011986-707833|Name=EMLSAT00000011986|organism=Lepeophtheirus salmonis|type=mRNA|length=1414bp|location=Sequence derived from alignment at LSalAtl2s853:248464..249877+ (Lepeophtheirus salmonis)
GTTTGTAACCAGCAGTGTGATAATACAATATTGTCACAGGCTTAACTGAC
TCAAAATGGCATCTCAATTCAAGGTAACTCTCGTCAAACAAACAAACGAC
ACAATACATTTTTTTCATTTGCTTAATATTTCATATTACAGTATATTTGC
TTAATTGCTTTAATCGGCTCAGCCGCTGCTGCTGGAGGACCAAGAGCAAG
AACTCTTACTGTCAACCGTGAGGGAAAATCTCTTCTCAATACCTTCCCCT
TCAATGATGGAGCCCGTGGAACTGCCCGTGCTGCTCATCATGAACATGAT
CATGCTGAACACGGTCATGCTCACGCTGAGCKCCCAGCTGCCTCTGACAA
CCGATTGGCCCGTCAAGGAGGTGGTGATGATGTCCCACTTGACATTGGAT
CCATTGCTGCMGCTGGAGAGCGTTGTATCGATAAGGTCGTCATGGTAGAA
GAAACCGAATACGATGATCACATCGAATGTCACCACAGCTACTCCGAGAG
ATGTCACACCACCTACTCCACCGACTTCGAACCTCAACAAGAGGAAGAGT
GCGAAGAAAACTTCAAAAAGAGTTGTTTCATTGAATACAAGAAGGTCGCT
GTTGATGAGACAGTCAAGTTAGTTGATAAAAACGCATCACCTTTTAATTG
ATATTTTGAATAATATTTAATTGTCCCTAGATTCTGTCACACTCCATTTA
TCTGTGAAGGAGAAGGACCCGAAGAATGCAAGACTGTTTACGAGTCCGAG
TGTGAAACTCGTTATCACGAACATGACGTTGAGGATGACGTTGTCAACTG
TCAGACCATTCAAGAAGAGAAGTGTGAGGATGTCACCCAAGGTTACACCA
CCGAGCAAAAATGTACCAAATGGCCCAAACAAGTCTGTACTTCCGAAAAG
AAGAACGTCAAGAAATACAGTCCCATAACTGAATGTAAGAAGGTCCCCAG
ACAATTGTGTGGTCCCTCCGGCTGTGTTCCCCAACCAGGACCCGAAGAGT
GTTTCGATAAGAAAGAAACCATCGTTCAAGAAGTCCCAGAGGAGAACTGT
AACTTGGAACCCCAAAAGGCTTGCAAACAAGTTACCAAATTGGTTCCCAG
CCTCAAGCCCGTTGAGGAGTGCGTTGATGTACCTAAAGAAGTCTGCTCCC
GTTCCAGAAAGAACCCCAGAAAGGTCCAAAAGCCTGTTGTCAAGAAATGG
TGCTACGTTCCATCTGCTGCTTCTGGTTTGGCTGCTTAATTTCTTCATGG
ATTTCTTCAACAATCAAAACTCGTTAAATATCAACCCTAGTCATATTCAA
ACTGCCACCAACTTATCCATTCTAAAGTCATTTAATTAAATGCACATTTA
ACTGATATAATAAGTATTTGATAAATTGAGTATGAATAAACCATATATTT
TTGATGAAATAAGC
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