EMLSAT00000012697, EMLSAT00000012697-708544 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012697
Unique NameEMLSAT00000012697-708544
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s963supercontigLSalAtl2s963:82712..83816 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012697 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012697EMLSAG00000012697-695463Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000056971EMLSAE00000056971-765899Lepeophtheirus salmonisexon
EMLSAE00000056972EMLSAE00000056972-765900Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771695auto771695Lepeophtheirus salmonispolypeptide
EMLSAP00000012697EMLSAP00000012697Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012697

>EMLSAP00000012697 ID=EMLSAP00000012697|Name=EMLSAP00000012697|organism=Lepeophtheirus salmonis|type=polypeptide|length=348bp
MASQFKCICLIALIGSSAAAGGPRSRIHLVNRDGRSLLNTFPFNDGARGT
ARAAHADHHEHDHAHAEXPAASDNRLARQGGGDDVPLDIGSIAAAGERCI
DKVVMVEETEYDDHIECHHSYSERCHTTYTTDFEPQQEEECEENFKKSCF
IEYKKVAVEETVKFCHTPLVCEGEGPEECKTVYESECETKYHEHDVEDDV
VNCETIQEEKCEDVTQGYTTEQKCTKWPKQVCTNEKKNVKKYSPQTECKK
VPRQLCGPSGCVPQPGPEECFDKKETIVQEVPEENCNLEPQKSCKQVTKL
VPSLKPVEECVDVPKEVCSRSRKNPRKVQKPVVKKWCYVPSAASGLAX
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mRNA from alignment at LSalAtl2s963:82712..83816-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012697-708544 ID=EMLSAT00000012697-708544|Name=EMLSAT00000012697|organism=Lepeophtheirus salmonis|type=mRNA|length=1105bp|location=Sequence derived from alignment at LSalAtl2s963:82712..83816- (Lepeophtheirus salmonis)
ATGGCATCTCAATTCAAGGTAATTCTCCTCTGAAAACGAAATAAAAAGGG
ATCTAATATTATAATTTCATTTTTAGTGTATTTGTTTAATTGCTTTGATT
GGATCTTCAGCTGCTGCCGGAGGACCAAGATCAAGAATTCATTTAGTCAA
TCGTGATGGAAGATCCCTTCTCAACACATTCCCCTTCAATGATGGAGCTC
GTGGAACTGCCCGTGCTGCTCATGCTGACCACCATGAACATGATCACGCT
CATGCTGAACKCCCAGCTGCCTCTGACAACAGATTGGCCCGTCAAGGAGG
TGGTGATGATGTCCCACTTGACATTGGATCCATTGCCGCWGCTGGWGAGC
GTTGTATCGATAAGGTCGTCATGGTAGAAGAAACCGAATACGATGACCAC
ATTGAATGTCACCACAGCTACTCCGAGAGATGTCACACCACCTACACCAC
CGACTTTGAACCCCAACAAGAGGAAGAGTGCGAAGAAAACTTCAAAAAGA
GTTGTTTCATTGAATACAAGAAGGTTGCTGTTGAGGAGACCGTCAAGTTC
TGTCACACTCCCTTAGTCTGCGAAGGTGAAGGACCTGAAGAATGTAAGAC
TGTCTACGAATCCGAGTGCGAAACTAAGTACCACGAACACGATGTTGAGG
ATGATGTTGTCAACTGTGAGACCATCCAAGAAGAGAAGTGTGAGGACGTC
ACCCAAGGTTACACCACCGAGCAAAAATGTACCAAATGGCCCAAACAAGT
ATGCACCAATGAAAAGAAGAACGTCAAGAAATACAGTCCCCAAACTGAAT
GTAAGAAGGTCCCCAGACAATTGTGCGGTCCCTCCGGCTGTGTTCCCCAA
CCCGGTCCAGAAGAGTGTTTCGACAAGAAAGAAACCATCGTCCAAGAAGT
CCCAGAGGAAAATTGTAACTTGGAACCCCAAAAGTCCTGCAAACAAGTCA
CCAAATTGGTTCCCAGCCTCAAACCTGTCGAGGAGTGCGTTGATGTACCC
AAAGAAGTCTGCTCTCGCTCCAGAAAGAACCCCAGAAAGGTCCAAAAGCC
CGTTGTCAAGAAATGGTGCTACGTTCCATCTGCTGCTTCTGGTTTGGCTG
STTAA
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