EMLSAT00000012807, EMLSAT00000012807-708654 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012807
Unique NameEMLSAT00000012807-708654
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s975supercontigLSalAtl2s975:98418..100862 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012807 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012807EMLSAG00000012807-695573Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000057504EMLSAE00000057504-766432Lepeophtheirus salmonisexon
EMLSAE00000057505EMLSAE00000057505-766433Lepeophtheirus salmonisexon
EMLSAE00000057506EMLSAE00000057506-766434Lepeophtheirus salmonisexon
EMLSAE00000057507EMLSAE00000057507-766435Lepeophtheirus salmonisexon
EMLSAE00000057508EMLSAE00000057508-766436Lepeophtheirus salmonisexon
EMLSAE00000057509EMLSAE00000057509-766437Lepeophtheirus salmonisexon
EMLSAE00000057510EMLSAE00000057510-766438Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772083auto772083Lepeophtheirus salmonispolypeptide
EMLSAP00000012807EMLSAP00000012807Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012807

>EMLSAP00000012807 ID=EMLSAP00000012807|Name=EMLSAP00000012807|organism=Lepeophtheirus salmonis|type=polypeptide|length=687bp
QDCVGILTFDKLTNTILDGVPKTLLFENEKEPITAKCNNICRSSANCSGF
NLNYDTNSCYSFESKGNKESLTSVNDRFSYFEKTCLQGIGCEKAWLFERF
PGFELIGLEDVTLDATLTLKDCQKECLEATDLPCRSAMFNYERKTCQLSR
ETRRSQPSAYRASVMDVEYLENQCAPKFNVESGCNYQESKDMDLKYADLT
FKSNSRENCQKRCDNMTVFNCRSFTFQPTTLECSLSGDDTFSAREGNLVN
QVGKNYYQKAPCLDVRLNCTSDAMEVTLNKRRGFFGKIFALFDSKNCFVD
GSGDRNTSLTIPYAGENCKLRKSNDEAFYTTIVIQEHPIIQKKGDQAITI
YCFFKSGDKVVTDNYEVLSESFNTEFPDTFSDISSSILNSTAPVPSVELR
IVDSLGQDVTGTKLGEPLFLRIELQGTSLLDIFARNLRARSGIDDEEILL
IDDVGCPIDSVFSGLTKENGTGHLLGRFEAFKFSDTSIVNFQVNVQFCDE
KCNPVDCINGGQSFGRRRKKRSEDYGSFHSFDGIRRSNRSNKRLVFDEIL
KQEVIIEEEPLKKQIFVDTGIAVASFKHPRIDVGTPGVFVQGDYSEKDVV
CTTWTVVIGVSSSIIFLQFCILLVCLLCVYASRRSKYIDRAESMTDSRXI
EGSTSFRNNSRKPLYFRSPIPENSEKALQVLRTSLRD
back to top

mRNA from alignment at LSalAtl2s975:98418..100862-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012807-708654 ID=EMLSAT00000012807-708654|Name=EMLSAT00000012807|organism=Lepeophtheirus salmonis|type=mRNA|length=2445bp|location=Sequence derived from alignment at LSalAtl2s975:98418..100862- (Lepeophtheirus salmonis)
CAAGACTGCGTTGGCATACTAACTTTCGACAAATTAACTAACACAATCCT
GGATGGTGTACCTAAGACTTTATTATTTGAGAATGAGAAGGAACCAATAA
CAGCAAAGTGCAATAATATGTAAGTATCTTTAATACAAATAAAAAGTCTT
CCTCGATATATACTGTTAAAAATTTCAAATATTTTAATACCAAGATGTCG
TTCCTCAGCAAATTGTTCGGGCTTTAATTTGAACTATGACACCAATAGCT
GTTATTCTTTCGAATCAAAAGGAAATAAAGAGTCTCTTACTTCTGTTAAT
GATCGATTTAGCTATTTTGAAAAGACTTGTCTTCAAGGTATTGGATGTGA
AAAGGCATGGTTATTTGAAAGATTTCCTGGATTTGAGTTGATTGGGTTGG
AGGATGTTACTCTGGATGCTACTTTGACTCTAAAAGACTGTCAAAAAGAA
TGTTTGGAGGCAACAGACTTGCCATGCAGATCAGCCATGTTTAATTATGA
AAGAAAAACATGTCAATTATCTAGAGAGACAAGAAGGTCTCAACCTTCAG
CTTACAGGTGAGTGTATTGATGAATTTTTTTTTTTTTAAACTAATTAATG
TGACTTTTAACATGATAAGAGCTTCAGTAATGGATGTAGAATATTTGGAA
AATCAATGTGCACCAAAATTTAATGTAGAAAGTGGATGTAACTATCAAGA
AAGTAAAGACATGGACTTGAAATATGCAGATCTTACATTTAAGTCAAATT
CCAGAGAAAATGTGAGTATCTACGAAACAAAATTTCGAGTTTACACTCGT
CAATAATAATGACATTTACAGTGTCAAAAGAGATGTGACAATATGACAGT
ATTTAACTGTAGATCCTTTACATTCCAACCAACTACATTGGAATGTTCAT
TAAGTGGAGACGACACCTTTTCTGCAAGAGAAGGGAACTTAGTGAATCAA
GTAGGCAAAAACTATTATCAAAAAGCTCCATGTTTAGACGGTCAGTTTGA
TATTAAAAATATATTTATTGCTGAAATTTTAAATGTTTACTTTGTTTCTA
GTAAGATTAAATTGCACATCTGATGCCATGGAGGTCACTCTTAATAAAAG
AAGAGGTTTTTTTGGGAAAATATTTGCACTTTTTGACTCAAAGAACTGTT
TTGTCGATGGTTCTGGAGATAGGAATACCTCCTTAACAATTCCTTATGCC
GGAGAAAATTGTAAATTGAGAAAAAGCAATGATGAAGCATTCTATACGAC
CATTGTAATTCAAGAGCATCCAATCATACAAAAGAAAGGTGATCAAGCGA
TAACCATCTATTGTTTTTTCAAATCTGGAGACAAAGTTGTCACAGACAAC
TATGAAGTTTTGTCTGAGTAAGATATAACATGAACTTTATTTTCAAAATT
GGTACATTTAAAAATAATATTTATTTAGGTCATTCAACACTGAATTTCCG
GATACATTTTCAGATATATCTTCTTCTATTCTCAACTCTACAGCTCCTGT
ACCTTCAGTAGAGCTCCGTATAGTCGATTCACTAGGTCAAGACGTGACGG
GTACAAAATTAGGAGAGCCTCTCTTTTTAAGGATTGAGTTACAAGGTACT
TCCTTATTGGACATATTTGCTCGTAACTTGAGAGCTAGATCCGGAATCGA
TGATGAAGAAATATTACTTATTGACGATGTTGGATGCCCAATAGACTCTG
TTTTCTCAGGCCTAACTAAAGAGAACGGAACTGGGCATCTATTGGGGCGT
TTTGAAGCATTCAAGTTCTCAGATACGAGCATTGTCAACTTTCAAGTGAA
CGTTCAATTTTGTGATGAGAAATGCAATCCAGTAACACAAACGCATGCAA
ATAAAAAATATAAAGTAATCATTTTATTTTACAATAAACATAGGTTGATT
GTATTAATGGAGGACAAAGTTTTGGGCGACGAAGAAAGAAACGTTCAGAG
GATTACGGATCCTTTCATTCATTTGATGGGATTAGGCGCTCCAATAGATC
AAATAAAAGACTTGTTTTTGATGAAATTTTAAAACAGGAAGTCATAATTG
AGGAGGAGCCTCTCAAAAAACAAATTTTCGTGGACACTGGAATAGCTGTG
GCTAGCTTTAAACACCCACGCATAGACGTGGGAACACCAGGGGTATTTGT
TCAAGGGGACTACTCAGAGAAGGATGTCGTTTGTACAACATGGACAGTTG
TTATTGGCGTGTCATCCTCCATCATTTTTCTGCAATTTTGTATACTTTTG
GTCTGTCTGCTCTGCGTTTATGCCAGTAGAAGGTCTAAATATATTGATAG
AGCGGAATCAATGACGGATAGTCGAAGKATTGAAGGAAGCACATCTTTTC
GAAATAACTCGAGAAAACCCCTCTATTTTCGATCCCCTATTCCAGAAAAC
TCAGAAAAAGCTCTTCAAGTCCTTCGAACGTCATTAAGAGACTGA
back to top
Add to Basket