EMLSAP00000001502, EMLSAP00000001502 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000001502
Unique NameEMLSAP00000001502
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length915
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPRINTSPR00261LDLRECEPTORcoord: 133..154
score: 50.44
coord: 176..197
score: 49.56
coord: 407..428
score: 47.23
coord: 91..112
score: 43.79
coord: 216..237
score: 50.11
IPR002172Low-density lipoprotein (LDL) receptor class A repeatSMARTSM00192LDLacoord: 792..825
e-value: 0.069
score: 14.5
coord: 120..161
e-value: 1.0E-7
score: 41.6
coord: 204..242
e-value: 4.8E-10
score: 49.4
coord: 394..433
e-value: 1.2E-5
score: 34.7
coord: 79..117
e-value: 4.6E-10
score: 49.4
coord: 753..790
e-value: 1.4E-9
score: 47.9
coord: 163..202
e-value: 1.3E-9
score: 47.9
IPR002172Low-density lipoprotein (LDL) receptor class A repeatGENE3D4.10.400.10coord: 123..154
e-value: 2.2E-6
score: 27.3
coord: 752..788
e-value: 1.7E-8
score: 34.0
IPR002172Low-density lipoprotein (LDL) receptor class A repeatGENE3D4.10.400.10coord: 209..241
e-value: 6.6E-11
score: 41.8
IPR002172Low-density lipoprotein (LDL) receptor class A repeatGENE3D4.10.400.10coord: 79..115
e-value: 6.5E-9
score: 35.1
coord: 392..431
e-value: 1.7E-7
score: 30.5
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPFAMPF00057Ldl_recept_acoord: 164..200
e-value: 7.3E-7
score: 28.8
coord: 204..240
e-value: 1.6E-7
score: 31.0
coord: 754..788
e-value: 4.2E-6
score: 26.4
coord: 120..159
e-value: 8.7E-7
score: 28.6
coord: 79..115
e-value: 1.1E-7
score: 31.4
IPR002172Low-density lipoprotein (LDL) receptor class A repeatGENE3D4.10.400.10coord: 793..835
e-value: 2.3E-5
score: 23.8
coord: 167..208
e-value: 1.3E-11
score: 43.9
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPROSITEPS50068LDLRA_2coord: 204..241
score: 12.738
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPROSITEPS50068LDLRA_2coord: 753..789
score: 11.875
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPROSITEPS50068LDLRA_2coord: 163..201
score: 12.613
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPROSITEPS50068LDLRA_2coord: 79..116
score: 12.15
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPROSITEPS50068LDLRA_2coord: 394..432
score: 11.313
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPROSITEPS50068LDLRA_2coord: 787..824
score: 9.287
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPROSITEPS50068LDLRA_2coord: 120..160
score: 11.35
IPR002172Low-density lipoprotein (LDL) receptor class A repeatSUPERFAMILY57424LDL receptor-like modulecoord: 752..788
IPR002172Low-density lipoprotein (LDL) receptor class A repeatSUPERFAMILY57424LDL receptor-like modulecoord: 167..201
IPR002172Low-density lipoprotein (LDL) receptor class A repeatSUPERFAMILY57424LDL receptor-like modulecoord: 203..240
IPR002172Low-density lipoprotein (LDL) receptor class A repeatSUPERFAMILY57424LDL receptor-like modulecoord: 121..156
IPR002172Low-density lipoprotein (LDL) receptor class A repeatSUPERFAMILY57424LDL receptor-like modulecoord: 393..432
IPR002172Low-density lipoprotein (LDL) receptor class A repeatSUPERFAMILY57424LDL receptor-like modulecoord: 80..115
IPR003599Immunoglobulin subtypeSMARTSM00409IGcoord: 254..335
e-value: 2.3E-4
score: 30.5
coord: 532..608
e-value: 9.4E-6
score: 35.1
coord: 450..523
e-value: 2.1
score: 17.3
IPR003598Immunoglobulin subtype 2SMARTSM00408IGc2coord: 538..597
e-value: 0.018
score: 23.7
coord: 260..328
e-value: 0.0011
score: 28.3
coord: 453..515
e-value: 1.2
score: 6.4
IPR002350Kazal domainSMARTSM00280KAZALcoord: 615..663
e-value: 4.3E-12
score: 56.2
coord: 340..387
e-value: 2.1E-4
score: 30.6
IPR002350Kazal domainPFAMPF00050Kazal_1coord: 616..663
e-value: 5.5E-10
score: 38.9
IPR002350Kazal domainPFAMPF07648Kazal_2coord: 345..383
e-value: 3.6E-6
score: 26.6
IPR002350Kazal domainPROSITEPS51465KAZAL_2coord: 335..389
score: 8.551
IPR002350Kazal domainPROSITEPS51465KAZAL_2coord: 610..665
score: 11.96
NoneNo IPR availablePFAMPF13895Ig_2coord: 259..324
e-value: 0.078
score: 13.0
coord: 539..609
e-value: 4.1E-8
score: 33.1
NoneNo IPR availableGENE3D3.30.60.30coord: 615..666
e-value: 5.6E-12
score: 45.2
NoneNo IPR availableGENE3D3.30.60.30coord: 340..387
e-value: 9.0E-9
score: 34.6
NoneNo IPR availablePANTHERPTHR10529LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATEDcoord: 85..788
NoneNo IPR availablePANTHERPTHR10529:SF110LDLA DOMAIN CONTAINING CHITIN BINDING PROTEIN 1, ISOFORM Acoord: 85..788
NoneNo IPR availableSUPERFAMILY100895Kazal-type serine protease inhibitorscoord: 341..389
NoneNo IPR availableSUPERFAMILY100895Kazal-type serine protease inhibitorscoord: 607..663
NoneNo IPR availableSUPERFAMILY48726Immunoglobulincoord: 247..325
NoneNo IPR availableSUPERFAMILY48726Immunoglobulincoord: 454..524
NoneNo IPR availableSUPERFAMILY48726Immunoglobulincoord: 517..608
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 458..525
e-value: 1.1E-6
score: 28.1
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 532..609
e-value: 1.1E-11
score: 44.1
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 250..334
e-value: 4.7E-9
score: 35.8
IPR023415Low-density lipoprotein (LDL) receptor class A, conserved sitePROSITEPS01209LDLRA_1coord: 218..240
IPR023415Low-density lipoprotein (LDL) receptor class A, conserved sitePROSITEPS01209LDLRA_1coord: 178..200
IPR023415Low-density lipoprotein (LDL) receptor class A, conserved sitePROSITEPS01209LDLRA_1coord: 135..159
IPR023415Low-density lipoprotein (LDL) receptor class A, conserved sitePROSITEPS01209LDLRA_1coord: 766..788
IPR023415Low-density lipoprotein (LDL) receptor class A, conserved sitePROSITEPS01209LDLRA_1coord: 93..115
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 525..606
score: 11.134
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 278..337
score: 6.633

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000001502 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000001502EMLSAT00000001502-697349Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000001502 ID=EMLSAP00000001502|Name=EMLSAP00000001502|organism=Lepeophtheirus salmonis|type=polypeptide|length=915bp
MVRVTVKTALMNNCVKLNVRKQSTFVMMDPASILPRGAMESTTVQTRVMR
HFAPCKYVVYNCRSIPIPVLTILSIFSAQCNSTIEFACNDGKCIDKALLC
DGTPHCHDSTDEISCKSSNNCDGDDEWKCLSGDVCIDKRKRCDGYPDCHD
LSDEDIDQCPERDCNEEWQFKCWDRKRCIDSRRLCDGYTDCLDGSDEVDC
LSVVCQYWQFKCLLDGXCVDSRRKCDGYNDCNDGSDETNCKGLSTQTYIF
EHSPKTIPVKLFSNVILDCNVVNPSGKWTYEGQNVHDSTSAGLEGRLGTA
FKNGSLLIRNFQKEDVGYYTCASSGGNEVSSVYVVLDASSCKKECKDDEF
AQRVCGSNGLIYSSLCDLTKASCNLKIKIRPVAMSKCNRLTTSKCAIDER
ECVNPSGKCIKETSFCDGIPDCEDKGDEKFCFRKDMKSVIIGKNISVAIK
NELEPKVVRIKCHLSGENFLWWFRDNLIQSNSAHATDEKGHVLIITDLRK
GDAGWYSCRNRAMEEYTTYLNVEYPAIAKGGPAELSFLAGQRGVIPCRVD
ANPSISYIVWHKNGSPIGSTKGSLVLDSVTSSKDRGDYTCTPYNLRGTMG
PSTKVSVRVRTRFYECPVYCSTEIYDPVCGIDGRTYDNECFLILESCNNI
RMKDLYAVHSGRCEKNSYGNMGRPQMTTSTILEILRATTTMVPYMDFNLM
ETTMLPPLDIFAYPTTTLCATTTETITTKPIYYPWTTSRPYETTQTPLDS
DISCKDHEWTCDDGHCIPFVNQCNGVSDCPGGEDEKYCADLKNDFICGDM
LIDKSLVCDGYPHCLNGEDEGDCPVEKEDDLKWTCPDSDNEYICDDYGKC
ICASLAPGATLPSALDSQSYTTTTLSPLLTTSPTFLSYDDEYIDNNFFGS
GHFPMKEELDTQTFE
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