EMLSAP00000001919, EMLSAP00000001919 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000001919
Unique NameEMLSAP00000001919
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length442
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001628Zinc finger, nuclear hormone receptor-typePRINTSPR00047STROIDFINGERcoord: 91..107
score: 57.38
coord: 140..148
score: 63.42
coord: 107..122
score: 60.45
coord: 148..156
score: 51.34
IPR001628Zinc finger, nuclear hormone receptor-typeSMARTSM00399ZnF_C4coord: 88..159
e-value: 6.8E-37
score: 138.6
IPR001628Zinc finger, nuclear hormone receptor-typePFAMPF00105zf-C4coord: 90..158
e-value: 6.9E-31
score: 106.1
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS00031NUCLEAR_REC_DBD_1coord: 91..117
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS51030NUCLEAR_REC_DBD_2coord: 88..163
score: 21.04
IPR001723Steroid hormone receptorPRINTSPR00398STRDHORMONERcoord: 338..353
score: 41.17
coord: 152..162
score: 47.6
coord: 249..270
score: 33.9
coord: 270..286
score: 42.69
coord: 395..412
score: 46.62
IPR000003Retinoid X receptor/HNF4PRINTSPR00545RETINOIDXRcoord: 300..325
score: 56.8
coord: 326..344
score: 64.21
coord: 367..386
score: 60.6
coord: 159..172
score: 59.66
IPR000536Nuclear hormone receptor, ligand-binding, coreSMARTSM00430HOLIcoord: 248..407
e-value: 1.7E-43
score: 160.5
IPR000536Nuclear hormone receptor, ligand-binding, corePFAMPF00104Hormone_recepcoord: 253..419
e-value: 4.9E-32
score: 110.6
IPR013088Zinc finger, NHR/GATA-typeGENE3D3.30.50.10coord: 87..152
e-value: 6.3E-32
score: 109.1
IPR008946Nuclear hormone receptor, ligand-bindingGENE3D1.10.565.10coord: 153..434
e-value: 1.3E-77
score: 260.3
IPR008946Nuclear hormone receptor, ligand-bindingSUPERFAMILY48508Nuclear receptor ligand-binding domaincoord: 142..154
coord: 181..423
NoneNo IPR availablePANTHERPTHR24083:SF38RETINOIC ACID RECEPTOR RXR-BETAcoord: 79..422
NoneNo IPR availablePANTHERPTHR24083NUCLEAR HORMONE RECEPTORcoord: 79..422
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 89..168

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000001919 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000001919EMLSAT00000001919-697766Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000001919 ID=EMLSAP00000001919|Name=EMLSAP00000001919|organism=Lepeophtheirus salmonis|type=polypeptide|length=442bp
MDPTPPTPNHLLNPGYMPQSPVDLKPDASLLLTTLSNPQSTPPSSAYPVG
ESMYGSQAPHPGVHGHARSTQSPPNNTYPPNHPLSGSKHFCSICGDRASG
KHYGVYSCEGCKGFFKRTVRKELTYACRENRDCVIDKRQRNRCQYCRYMK
CLDTGMKREAVQEERHRGSNGPNHNNNNNNNNNNSRNSEEVESSTSGGGG
DMPIERIIEAEDVGEMKQDTSEFLLLDNNSSMSGGGSIGDMEIQRFGLAK
KRIIHQLIEWAKLVPHFSELKVEDQVTLIRGGWNELLVAGLAFXSIKLND
GILLGNGTIVTRENAHEAGVGHIFDRVLVELIAKMKEMQMDKAELGCLRA
IILFNPDAKGLSDVTKVENLREKVYATLEEYTRSVHENEPSRFAKLLLRL
PALRSIGLKCLEHLFFYKLVGDYLNDGNPLEKFIQSLLEECC
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