EMLSAP00000001998, EMLSAP00000001998 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000001998
Unique NameEMLSAP00000001998
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length1259
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 896..963
e-value: 1.0E-11
score: 43.8
coord: 738..766
e-value: 1.0E-11
score: 43.8
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 987..1087
e-value: 1.3E-12
score: 46.9
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 632..733
e-value: 2.5E-20
score: 71.9
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 632..737
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 987..1085
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 739..767
coord: 899..965
IPR015187BRCA2, oligonucleotide/oligosaccharide-binding 1PFAMPF09103BRCA-2_OB1coord: 633..732
e-value: 2.7E-19
score: 68.8
IPR015188BRCA2, oligonucleotide/oligosaccharide-binding 3PFAMPF09104BRCA-2_OB3coord: 986..1093
e-value: 3.9E-11
score: 42.8
IPR015252DNA recombination/repair protein BRCA2, helical domainPFAMPF09169BRCA-2_helicalcoord: 556..628
e-value: 1.3E-7
score: 31.3
IPR015252DNA recombination/repair protein BRCA2, helical domainSUPERFAMILY81872BRCA2 helical domaincoord: 553..627
IPR015525Breast cancer type 2 susceptibility proteinPANTHERPTHR11289BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2coord: 556..1209
NoneNo IPR availableSUPERFAMILY81878BRCA2 tower domaincoord: 771..886

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000001998 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000001998EMLSAT00000001998-697845Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000001998 ID=EMLSAP00000001998|Name=EMLSAP00000001998|organism=Lepeophtheirus salmonis|type=polypeptide|length=1259bp
SPEHHVSLKNEKHFETTHCIESINVNKHVKSNTPSENPFNGVDNEMFPMN
LCIEKYNKRGKSINEYVPSLTPLPSPIKYEDQLKGKKEDIFYDTFNTGSD
QLSAELIQKNQNLITNEQLKISSHTFKELQERKIIDSISIHNMKSTKQVP
SNYGQLNSELEESEKLQDNVHQLFSHDSETLNSLKSAEKNVNLSEKVTLC
QSIESHEHIDKESNPFCQNNIFNFSPCKSLSEIGIVSSKMEKQRSCINTC
DDKHDTNNKYVSKAVEPIKTNRSNISEIHFKNNNSGFIQCGVGISKSAMD
KAKNIFQGEDFNELYQKDSNDPNISSVHSFKVPTKPNGQNESHIQLKSSK
NIGFIKCGSKESVGISKSAMDKAKNIFQGEDFNELFQKDSNDPYISSVHS
FKFTPLKCLQSPMEQNESHIQLKTSKNRDDLSKFFNREIDSVDSSKTISV
CQNESFSSEDDTFDQDVFDTQFLEEVEKTENSYFNLKRKSPITFECSSNK
KCNVSILKLTNDKLLSNFQTDLYHLRQKLPSRVCLKKIALKSIPRTPGFL
GQISTSNNHQIRLKEIRDLLLSLSSVDNSKVNDDWIANHYKWIFLYLHSL
SLRTELYDELSPLSILWRLKYRYDREIAGSCRSALKKIYEGDDSPSKPII
LFIAAIHSDTIELSDGWYSIHSVLKPSISKLISMKKIKXXXEIERDSSHG
NCKPLEDEGRTRLNFSINSCRRARWWAKLGFHWGPRLIIKLKSIKEDGGL
VARVKVIIRRRYPLVYMEKKESKITYINERVYNKKMHALKNSKEEIAEKI
YSQVQKELEDKRIVSQKNKAQFRHGLKIINRTSNVEELYNLIETYADPSI
LESLSSSQVDELKEFKNKESETFRNEMRHEVEARLKSYEETSRVEYVPVL
RLKISDQSPNVFGTLSLWKPSHELLSLLHEDRPFFIHCISANKVFFDEVN
LSSLKSTVFREVSEDFKMNDYFGKSRSLASILDIVMDEYDFKSNFNEVDL
VGLVIQVNDPGRSNEKVVNSAYGSIYLSDLMGNFVRIRFFNSLKDLGMET
LIVPAQVIYFRNLSFRTKDLSLKEIPSLFMKEQTEAFSSSNDSIVSSIIT
EFMESATPNFVDDSARLLATLLGTEIKSPCGYNKDKMSIEITPTSNERAQ
IADPHLFSPSSTIEIVSNSPAALQSSRNQSKLLKLKSMNYADASPLLPII
PLPNGGTXKSNSYAKLYKVPKRRRSKLSFEQEISSNKEPRQESQEFEEAA
NLAMDNLEM
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