EMLSAP00000002328, EMLSAP00000002328 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000002328
Unique NameEMLSAP00000002328
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length876
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01705TSP1REPEATcoord: 635..646
score: 37.2
coord: 505..516
score: 45.91
coord: 487..500
score: 50.32
NoneNo IPR availableGENE3D2.20.100.10coord: 369..424
e-value: 2.3E-16
score: 59.3
coord: 598..648
e-value: 7.0E-16
score: 57.7
coord: 658..685
e-value: 5.4E-7
score: 29.3
coord: 427..473
e-value: 6.3E-13
score: 48.2
coord: 544..596
e-value: 1.3E-15
score: 56.9
coord: 312..367
e-value: 3.3E-16
score: 58.8
coord: 697..751
e-value: 1.1E-15
score: 57.1
coord: 803..856
e-value: 7.7E-14
score: 51.2
coord: 755..801
e-value: 1.3E-8
score: 34.4
coord: 261..310
e-value: 6.2E-13
score: 48.3
coord: 485..537
e-value: 3.1E-17
score: 62.0
NoneNo IPR availablePANTHERPTHR19897COILED-COIL DOMAIN-CONTAINING PROTEINcoord: 259..683
NoneNo IPR availablePANTHERPTHR19897:SF72HEMICENTIN-1coord: 259..683
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.781
IPR000742Epidermal growth factor-like domainSMARTSM00181EGFcoord: 197..227
e-value: 17.0
score: 13.5
coord: 163..194
e-value: 0.0012
score: 28.1
coord: 102..132
e-value: 0.025
score: 23.8
coord: 70..101
e-value: 11.0
score: 14.9
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 194..227
score: 7.348
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 105..132
score: 6.564
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 67..101
score: 8.452
IPR000884Thrombospondin, type 1 repeatSMARTSM00209TSP1coord: 430..484
e-value: 6.2E-9
score: 45.7
coord: 373..425
e-value: 9.3E-14
score: 61.7
coord: 261..311
e-value: 7.2E-13
score: 58.8
coord: 807..860
e-value: 2.2E-4
score: 30.5
coord: 757..802
e-value: 3.9E-8
score: 43.0
coord: 489..542
e-value: 2.9E-14
score: 63.4
coord: 659..690
e-value: 0.1
score: 18.0
coord: 316..368
e-value: 1.9E-12
score: 57.4
coord: 547..597
e-value: 2.6E-13
score: 60.2
coord: 700..752
e-value: 8.3E-13
score: 58.6
coord: 602..653
e-value: 1.1E-11
score: 54.8
IPR000884Thrombospondin, type 1 repeatPFAMPF00090TSP_1coord: 433..467
e-value: 2.3E-10
score: 40.2
coord: 603..649
e-value: 4.3E-10
score: 39.4
coord: 759..801
e-value: 3.8E-8
score: 33.2
coord: 703..751
e-value: 2.2E-11
score: 43.5
coord: 490..538
e-value: 1.0E-12
score: 47.8
coord: 808..856
e-value: 2.2E-6
score: 27.5
coord: 374..424
e-value: 2.3E-10
score: 40.3
coord: 317..367
e-value: 2.6E-10
score: 40.1
coord: 549..596
e-value: 7.3E-12
score: 45.0
coord: 262..310
e-value: 1.5E-10
score: 40.8
coord: 661..690
e-value: 2.6E-6
score: 27.3
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 754..802
score: 11.943
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 313..368
score: 12.217
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 599..653
score: 12.721
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 370..425
score: 13.381
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 544..597
score: 13.157
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 427..484
score: 11.406
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 656..690
score: 9.289
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 258..311
score: 12.961
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 697..752
score: 12.873
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 486..542
score: 13.214
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 804..859
score: 10.221
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 541..596
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 595..649
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 482..537
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 258..310
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 801..856
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 424..472
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 751..801
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 312..363
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 367..424
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 697..747
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 658..686
IPR013032EGF-like, conserved sitePFAMPF12661hEGFcoord: 214..226
e-value: 0.0086
score: 15.9
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 89..103
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 215..229
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 215..226
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 89..100
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 150..164
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 182..193
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 150..161
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 182..193
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 120..131
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 120..131

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000002328 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000002328EMLSAT00000002328-698175Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000002328 ID=EMLSAP00000002328|Name=EMLSAP00000002328|organism=Lepeophtheirus salmonis|type=polypeptide|length=876bp
MIFLSTLLIIGILITPSKSTGRITPLLKVNSTACIAENLRLTDRYICDSY
GNIICVGGWSNPTTLCNVPVCDMNGQGCLNGECLYPNVCACEVGWDGPNC
DECIPLGGCRHGSCQKPMECNCKPGWTGGRCSKPQCEGCANGCCHEPNKC
ICDFGWKGHNCTECQTLSNCKHGKCLTHPFQCECFDGWQGLDCSKPICRV
GCHPTYGFCESPGECICKNGWSGRDCTDCVPYPGCNGTCVNSKPWTCTDI
NTNGMAKPDIWSQWSQWSSCSKTCGDGTQKRDRTCLDRNGVSGNCVGKSD
ETRTCSVLACKIDGGWSIWTKWTPCSSTCGTGTKARFRSCSNPIPKYGGK
ICVGXASESAKCFSRYCPVEGRWSSWKSWGGCSVTCGEGTRHRNRYCDSP
SPAHGGPSCFGPPVESTKCIEKECPIDGIWLSWTQWTTCSKTCGPGTQER
TRTCDGPQFGGQSCSGNFTIERDVIPCWQIVVCPTDGEWSEWDTWSPCSK
TCESGSRFRQRHCNNPAPKFGGKTCRGSAIENGVCNADVNCPINGKWNSW
GRWSICSVSCGGGIQGRRRTCTVPQFGGEPCNGQSDQERQCNQIPCPVDG
VWSLWSKWSSCSKTCEGGFRQRIRECISPQLGTELCSGSSREIESCNNKI
SCTTDTSNWNTWSNWSSCSASCGHGLRVRSRACPTKGSCEVGLEFSDGNW
GYWQEWTSCSVSCGKGQKTRGRFCNNPPPSDGGKPCSGYGLEKSYCIQEE
CTTGGSWGQWGTWSACTLTCGNSVRTRARTCHNSSCEGEGIQTERCSVPK
CPIDGGFSQWLLWSQCTADCKGDRGNQSRRRFCNNPVPLHGGKGCAGEIK
QKRYCTGNLHKQETNPDAPCFHIGNR
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