EMLSAP00000002513, EMLSAP00000002513 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000002513
Unique NameEMLSAP00000002513
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length525
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015880Zinc finger, C2H2-likeSMARTSM00355ZnF_C2H2coord: 425..449
e-value: 27.0
score: 9.5
coord: 398..421
e-value: 0.046
score: 22.9
coord: 349..372
e-value: 6.5
score: 14.9
coord: 69..92
e-value: 5.9E-4
score: 29.1
coord: 40..63
e-value: 0.069
score: 22.3
coord: 127..150
e-value: 0.47
score: 19.5
coord: 165..188
e-value: 3.4
score: 16.7
coord: 98..121
e-value: 0.0042
score: 26.3
coord: 195..218
e-value: 0.0028
score: 26.9
coord: 374..396
e-value: 0.01
score: 25.0
IPR007087Zinc finger, C2H2PFAMPF00096zf-C2H2coord: 40..63
e-value: 0.039
score: 14.1
coord: 195..218
e-value: 4.0E-4
score: 20.4
coord: 69..92
e-value: 5.5E-5
score: 23.1
coord: 98..121
e-value: 0.016
score: 15.4
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 100..121
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 42..63
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 400..421
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 129..150
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 167..188
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 197..218
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 71..92
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 376..396
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 351..372
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 398..426
score: 9.182
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 195..227
score: 9.868
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 127..155
score: 9.224
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 165..193
score: 9.993
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 374..401
score: 9.806
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 40..68
score: 10.575
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 69..97
score: 13.069
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 98..126
score: 9.245
NoneNo IPR availablePFAMPF13894zf-C2H2_4coord: 374..396
e-value: 0.089
score: 13.0
coord: 399..421
e-value: 0.0041
score: 17.2
coord: 127..150
e-value: 0.098
score: 12.9
NoneNo IPR availablePANTHERPTHR24375FAMILY NOT NAMEDcoord: 17..459
NoneNo IPR availablePANTHERPTHR24375:SF0SUBFAMILY NOT NAMEDcoord: 17..459
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 38..89
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 373..416
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 163..214
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 77..135
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3D3.30.160.60coord: 38..70
e-value: 9.2E-7
score: 28.3
coord: 71..97
e-value: 6.9E-7
score: 28.7
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3D3.30.160.60coord: 98..118
e-value: 5.6E-4
score: 18.9

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000002513 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000002513EMLSAT00000002513-698360Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000002513 ID=EMLSAP00000002513|Name=EMLSAP00000002513|organism=Lepeophtheirus salmonis|type=polypeptide|length=525bp
MFFPYGQEEIHTNVNIYNNKENNMNQIIRTNASSADTKPWVCSVCSKRFA
MKRGLTVHVDTIHENSKRFECHLCSRVFNQKGNLNNHIKVSHEGSKDYQC
ELCDWKFSAVALLDKHMISVHKVDSHFDCDICGQIYDNRKLLRKHKVSFH
KDSTGNRMYEVRKRFFCGFCSIGFSFKTFLDKHIASVHSGKHSEHVCKVC
DKSFEDKTSLESHTATKHKQIHLQQQEIHKQRVSLPQQQILLTIPETSST
QILQTNQVIPQSVQTGQSQQGQVHXQQQPQQQIFYQAYNAQSQLLGQQQA
QQQQTSQQPQSSSNSNNSIASTLHSIQGNISLQNSDQTVQLVLQQPVAEV
CDLCNLPCSDKQDLVKHKALFHNFKCEICDNKFPSFESLTIHKISHLTPC
PVCEVRFKDKSELLQHFIETHEGKELCNICYVEVFDSKENLAAHLDSQHG
PEFKIKCEETTNSVKNEVKEHKKFVSVVDELVVQLQKYKDKSSHRKRKSK
DMNSSSSVEQGSENKSQHLGNEGIT
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